FFCP PHASE1:Mm9::chr19:46452641..46452686,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:46452641..46452686,-|id=chr19:46452641..46452686,-|ontology_enrichment_celltype=CL:0000055!1.10e-11!50;CL:0000723!4.35e-10!91;CL:0000048!4.35e-10!91;CL:0000548!6.26e-10!115;CL:0000004!6.26e-10!115;CL:0000255!6.26e-10!115;CL:0000034!7.96e-10!97;CL:0002371!8.75e-10!118;CL:0002319!2.82e-09!43;CL:0000144!6.77e-09!121;CL:0000012!6.77e-09!121;CL:0000117!7.37e-09!23;CL:0000337!7.37e-09!23;CL:0000221!8.22e-09!44;CL:0000133!8.22e-09!44;CL:0000393!4.26e-08!39;CL:0000211!4.26e-08!39;CL:0002321!6.10e-08!70;CL:0000220!6.10e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,6.37e-20,23;CL:0000337,6.37e-20,23;CL:0002319,5.45e-16,43;CL:0000221,1.83e-15,44;CL:0000133,1.83e-15,44;CL:0000393,9.82e-15,39;CL:0000211,9.82e-15,39;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000723,4.50e-13,91;CL:0000048,4.50e-13,91;CL:0002321,7.87e-13,70;CL:0000034,1.16e-11,97;CL:0002609,3.70e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.73e-17!34;UBERON:0001049!2.39e-16!52;UBERON:0005068!2.39e-16!52;UBERON:0006241!2.39e-16!52;UBERON:0007135!2.39e-16!52;UBERON:0000073!8.53e-16!75;UBERON:0001016!8.53e-16!75;UBERON:0001017!1.73e-15!73;UBERON:0005743!1.73e-15!73;UBERON:0002791!4.18e-14!29;UBERON:0003528!4.18e-14!29;UBERON:0001893!4.18e-14!29;UBERON:0002616!1.28e-12!49;UBERON:0000955!2.14e-12!50;UBERON:0006238!2.14e-12!50;UBERON:0000956!5.10e-12!21;UBERON:0001869!5.10e-12!21;UBERON:0000203!5.10e-12!21;UBERON:0002780!1.50e-11!39;UBERON:0001890!1.50e-11!39;UBERON:0006240!1.50e-11!39;UBERON:0003080!1.67e-11!40;UBERON:0004121!3.54e-11!102;UBERON:0000924!3.54e-11!102;UBERON:0006601!3.54e-11!102;UBERON:0002346!1.40e-10!71;UBERON:0003075!1.40e-10!71;UBERON:0007284!1.40e-10!71;UBERON:0002619!3.15e-10!17;UBERON:0000025!1.25e-08!114;UBERON:0000033!4.90e-08!63;UBERON:0004111!6.88e-08!122;UBERON:0002021!8.56e-08!10;UBERON:0000411!8.56e-08!10;UBERON:0001950!8.56e-08!10;UBERON:0003056!1.93e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.59e-34,34;UBERON:0003528,3.47e-27,29;UBERON:0002791,3.47e-27,29;UBERON:0001893,3.47e-27,29;UBERON:0001049,5.95e-24,52;UBERON:0005068,5.95e-24,52;UBERON:0006241,5.95e-24,52;UBERON:0007135,5.95e-24,52;UBERON:0000073,9.36e-23,54;UBERON:0000956,4.12e-22,21;UBERON:0001869,4.12e-22,21;UBERON:0000203,4.12e-22,21;UBERON:0001017,6.70e-22,73;UBERON:0001016,5.00e-21,75;UBERON:0002619,4.24e-19,17;UBERON:0002780,2.55e-18,39;UBERON:0001890,2.55e-18,39;UBERON:0006240,2.55e-18,39;UBERON:0002346,1.08e-17,64;UBERON:0003075,1.08e-17,64;UBERON:0007284,1.08e-17,64;UBERON:0003080,1.11e-17,40;UBERON:0002616,2.10e-17,46;UBERON:0000955,7.20e-17,47;UBERON:0006238,7.20e-17,47;UBERON:0004121,2.31e-16,95;UBERON:0000924,2.31e-16,95;UBERON:0006601,2.31e-16,95;UBERON:0002021,2.74e-16,10;UBERON:0000411,2.74e-16,10;UBERON:0001950,2.74e-16,10;UBERON:0010371,1.68e-15,73;UBERON:0003056,3.93e-13,49;UBERON:0000025,4.86e-12,114;UBERON:0004111,2.73e-11,122;UBERON:0010314,1.71e-10,92;UBERON:0002240,8.00e-09,6;UBERON:0005174,8.00e-09,6;UBERON:0001137,8.00e-09,6;UBERON:0001948,8.62e-08,5;UBERON:0002315,8.62e-08,5;UBERON:0003076,6.89e-07,12;UBERON:0003057,6.89e-07,12|phase1_expression=0,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0.516493293766305,0.563154888606667,0.468129052643987,0.513653904676515,0.159544317990673,0.342401459862411,0.611942816932982,0.666219523631325,0.607425802169478,0,0.157731082679119,0.274228867211478,0,0.595303031057488,0.297872853602656,0.783599367416806,0.639969691173627,0.68822784320151,0,0,0.430942465371778,1.71021077510736,0,0.221730510655305,1.27006134691926,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,1.51076181570693,1.01376931219515,0.734187008646726,0.782391344348039,2.8343270329458,1.5378032791413,3.4997381833371,1.53985063787899,1.43752564364972,0.335565212115473,0.725362142011344,0,2.05807548828758,0.85960031981627,0.515672092277442,1.41621522601718,0.528990979272033,1.90149421051854,1.35537812827653,3.55717918444456,1.7997994345628,1.97773272513395,1.4209602298922,0.898800331555214,0.384218305321555,2.69592992002042,3.51015439662396,2.10324961351382,1.71390590642282,2.65042249141936,1.46988959057945,1.62937300731002,1.83843757322004,0,0.383062014255563,1.68967186581868,1.71452174049252,3.47653045689157,3.64639359389732,1.95428099300967,0,1.22238598221448,1.47314292736834,2.98980529678116,1.86399445825301,0.605809546665472,0.529000920747499,0.289864488701678,1.72084775396277,1.3599426674155,0.539703191637817,1.94932925234301,2.68816132258401,0.421333260395256,1.02258193546835,0.779358013808606,1.7666978725517,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.68510327831436,0,0.593768556259299,0.173485326766136,0.608930956624282,0,0.150722640552623,0.23517741427141,0.502666365318702,0.988779870937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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:46452641..46452686,- | |||
|description=CAGE_peak_at_chr19:46452641..46452686,- | |||
|id=chr19:46452641..46452686,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-11!50;CL:0000723!4.35e-10!91;CL:0000048!4.35e-10!91;CL:0000548!6.26e-10!115;CL:0000004!6.26e-10!115;CL:0000255!6.26e-10!115;CL:0000034!7.96e-10!97;CL:0002371!8.75e-10!118;CL:0002319!2.82e-09!43;CL:0000144!6.77e-09!121;CL:0000012!6.77e-09!121;CL:0000117!7.37e-09!23;CL:0000337!7.37e-09!23;CL:0000221!8.22e-09!44;CL:0000133!8.22e-09!44;CL:0000393!4.26e-08!39;CL:0000211!4.26e-08!39;CL:0002321!6.10e-08!70;CL:0000220!6.10e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.37e-20,23;CL:0000337,6.37e-20,23;CL:0002319,5.45e-16,43;CL:0000221,1.83e-15,44;CL:0000133,1.83e-15,44;CL:0000393,9.82e-15,39;CL:0000211,9.82e-15,39;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000723,4.50e-13,91;CL:0000048,4.50e-13,91;CL:0002321,7.87e-13,70;CL:0000034,1.16e-11,97;CL:0002609,3.70e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.73e-17!34;UBERON:0001049!2.39e-16!52;UBERON:0005068!2.39e-16!52;UBERON:0006241!2.39e-16!52;UBERON:0007135!2.39e-16!52;UBERON:0000073!8.53e-16!75;UBERON:0001016!8.53e-16!75;UBERON:0001017!1.73e-15!73;UBERON:0005743!1.73e-15!73;UBERON:0002791!4.18e-14!29;UBERON:0003528!4.18e-14!29;UBERON:0001893!4.18e-14!29;UBERON:0002616!1.28e-12!49;UBERON:0000955!2.14e-12!50;UBERON:0006238!2.14e-12!50;UBERON:0000956!5.10e-12!21;UBERON:0001869!5.10e-12!21;UBERON:0000203!5.10e-12!21;UBERON:0002780!1.50e-11!39;UBERON:0001890!1.50e-11!39;UBERON:0006240!1.50e-11!39;UBERON:0003080!1.67e-11!40;UBERON:0004121!3.54e-11!102;UBERON:0000924!3.54e-11!102;UBERON:0006601!3.54e-11!102;UBERON:0002346!1.40e-10!71;UBERON:0003075!1.40e-10!71;UBERON:0007284!1.40e-10!71;UBERON:0002619!3.15e-10!17;UBERON:0000025!1.25e-08!114;UBERON:0000033!4.90e-08!63;UBERON:0004111!6.88e-08!122;UBERON:0002021!8.56e-08!10;UBERON:0000411!8.56e-08!10;UBERON:0001950!8.56e-08!10;UBERON:0003056!1.93e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.59e-34,34;UBERON:0003528,3.47e-27,29;UBERON:0002791,3.47e-27,29;UBERON:0001893,3.47e-27,29;UBERON:0001049,5.95e-24,52;UBERON:0005068,5.95e-24,52;UBERON:0006241,5.95e-24,52;UBERON:0007135,5.95e-24,52;UBERON:0000073,9.36e-23,54;UBERON:0000956,4.12e-22,21;UBERON:0001869,4.12e-22,21;UBERON:0000203,4.12e-22,21;UBERON:0001017,6.70e-22,73;UBERON:0001016,5.00e-21,75;UBERON:0002619,4.24e-19,17;UBERON:0002780,2.55e-18,39;UBERON:0001890,2.55e-18,39;UBERON:0006240,2.55e-18,39;UBERON:0002346,1.08e-17,64;UBERON:0003075,1.08e-17,64;UBERON:0007284,1.08e-17,64;UBERON:0003080,1.11e-17,40;UBERON:0002616,2.10e-17,46;UBERON:0000955,7.20e-17,47;UBERON:0006238,7.20e-17,47;UBERON:0004121,2.31e-16,95;UBERON:0000924,2.31e-16,95;UBERON:0006601,2.31e-16,95;UBERON:0002021,2.74e-16,10;UBERON:0000411,2.74e-16,10;UBERON:0001950,2.74e-16,10;UBERON:0010371,1.68e-15,73;UBERON:0003056,3.93e-13,49;UBERON:0000025,4.86e-12,114;UBERON:0004111,2.73e-11,122;UBERON:0010314,1.71e-10,92;UBERON:0002240,8.00e-09,6;UBERON:0005174,8.00e-09,6;UBERON:0001137,8.00e-09,6;UBERON:0001948,8.62e-08,5;UBERON:0002315,8.62e-08,5;UBERON:0003076,6.89e-07,12;UBERON:0003057,6.89e-07,12 | |||
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| |||
|short_description=p@chr19:46452641..46452686,- | |||
}} |
Latest revision as of 05:41, 4 August 2015
Short description: | p@chr19:46452641..46452686, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46452641..46452686, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.37e-20 | 23 |
neuroblast (sensu Vertebrata) | 6.37e-20 | 23 |
neural cell | 5.45e-16 | 43 |
ectodermal cell | 1.83e-15 | 44 |
neurectodermal cell | 1.83e-15 | 44 |
electrically responsive cell | 9.82e-15 | 39 |
electrically active cell | 9.82e-15 | 39 |
neuron | 1.13e-13 | 33 |
neuronal stem cell | 1.13e-13 | 33 |
neuroblast | 1.13e-13 | 33 |
electrically signaling cell | 1.13e-13 | 33 |
somatic stem cell | 4.50e-13 | 91 |
multi fate stem cell | 4.50e-13 | 91 |
embryonic cell | 7.87e-13 | 70 |
stem cell | 1.16e-11 | 97 |
neuron of cerebral cortex | 3.70e-09 | 6 |