FFCP PHASE1:Mm9::chr14:67529914..67529930,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:67529914..67529930,-|id=chr14:67529914..67529930,-|ontology_enrichment_celltype=CL:0000117!1.78e-20!23;CL:0000337!1.78e-20!23;CL:0000540!4.76e-19!33;CL:0000047!4.76e-19!33;CL:0000031!4.76e-19!33;CL:0000404!4.76e-19!33;CL:0000393!2.47e-14!39;CL:0000211!2.47e-14!39;CL:0000221!4.65e-13!44;CL:0000133!4.65e-13!44;CL:0002319!1.04e-12!43;CL:0000055!1.98e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-30,23;CL:0000337,1.41e-30,23;CL:0000540,1.11e-20,33;CL:0000047,1.11e-20,33;CL:0000031,1.11e-20,33;CL:0000404,1.11e-20,33;CL:0000393,2.34e-16,39;CL:0000211,2.34e-16,39;CL:0002319,3.67e-14,43;CL:0000221,1.12e-13,44;CL:0000133,1.12e-13,44;CL:0002609,1.09e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.00e-31!73;UBERON:0005743!4.00e-31!73;UBERON:0000073!1.24e-30!75;UBERON:0001016!1.24e-30!75;UBERON:0001049!4.34e-28!52;UBERON:0005068!4.34e-28!52;UBERON:0006241!4.34e-28!52;UBERON:0007135!4.34e-28!52;UBERON:0002346!5.86e-28!71;UBERON:0003075!5.86e-28!71;UBERON:0007284!5.86e-28!71;UBERON:0002020!3.45e-26!34;UBERON:0000033!1.42e-25!63;UBERON:0004121!1.81e-25!102;UBERON:0000924!1.81e-25!102;UBERON:0006601!1.81e-25!102;UBERON:0000955!1.87e-25!50;UBERON:0006238!1.87e-25!50;UBERON:0002616!3.90e-25!49;UBERON:0003056!6.99e-23!49;UBERON:0003080!2.18e-22!40;UBERON:0002780!1.40e-21!39;UBERON:0001890!1.40e-21!39;UBERON:0006240!1.40e-21!39;UBERON:0002791!1.52e-21!29;UBERON:0003528!1.52e-21!29;UBERON:0001893!1.52e-21!29;UBERON:0007811!2.02e-14!86;UBERON:0000956!3.27e-14!21;UBERON:0001869!3.27e-14!21;UBERON:0000203!3.27e-14!21;UBERON:0000153!2.79e-12!94;UBERON:0002619!1.74e-11!17;UBERON:0002021!6.95e-10!10;UBERON:0000411!6.95e-10!10;UBERON:0001950!6.95e-10!10;UBERON:0002420!1.26e-08!8;UBERON:0007245!1.26e-08!8;UBERON:0010009!1.26e-08!8;UBERON:0010011!1.26e-08!8;UBERON:0000454!1.26e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.06e-40,34;UBERON:0000073,3.01e-36,54;UBERON:0001049,9.59e-34,52;UBERON:0005068,9.59e-34,52;UBERON:0006241,9.59e-34,52;UBERON:0007135,9.59e-34,52;UBERON:0003528,6.01e-33,29;UBERON:0002791,6.01e-33,29;UBERON:0001893,6.01e-33,29;UBERON:0001017,4.20e-32,73;UBERON:0001016,6.82e-31,75;UBERON:0003080,2.39e-27,40;UBERON:0002346,1.27e-26,64;UBERON:0003075,1.27e-26,64;UBERON:0007284,1.27e-26,64;UBERON:0002780,3.60e-26,39;UBERON:0001890,3.60e-26,39;UBERON:0006240,3.60e-26,39;UBERON:0002616,4.06e-26,46;UBERON:0000955,2.38e-25,47;UBERON:0006238,2.38e-25,47;UBERON:0010371,6.77e-22,73;UBERON:0000956,1.28e-21,21;UBERON:0001869,1.28e-21,21;UBERON:0000203,1.28e-21,21;UBERON:0004121,1.28e-21,95;UBERON:0000924,1.28e-21,95;UBERON:0006601,1.28e-21,95;UBERON:0003056,1.35e-20,49;UBERON:0002619,2.00e-17,17;UBERON:0010314,5.17e-15,92;UBERON:0002021,2.60e-14,10;UBERON:0000411,2.60e-14,10;UBERON:0001950,2.60e-14,10;UBERON:0002420,2.19e-12,8;UBERON:0007245,2.19e-12,8;UBERON:0010009,2.19e-12,8;UBERON:0010011,2.19e-12,8;UBERON:0000454,2.19e-12,8;UBERON:0000025,2.39e-09,114;UBERON:0002240,4.55e-09,6;UBERON:0005174,4.55e-09,6;UBERON:0001137,4.55e-09,6;UBERON:0000369,8.81e-09,5;UBERON:0002435,8.81e-09,5;UBERON:0000204,8.81e-09,5;UBERON:0010082,8.81e-09,5;UBERON:0001948,4.12e-08,5;UBERON:0002315,4.12e-08,5;UBERON:0004111,4.54e-08,122;UBERON:0003076,8.05e-07,12;UBERON:0003057,8.05e-07,12|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,8.46385566835253,9.50747105259269,0,0,0,0,0,0,0,1.8664130215526,1.62007125998029,1.47227472945967,5.14171771926846,6.62605622854841,2.81728838194394,3.45043695665651,6.43453150627015,2.20231761998777,4.08599481872601,5.06901559745603,10.5509030184155,11.4359554503012,7.8137005583514,4.74611098302348,4.50210088025344,6.26472815884921,6.18720029494702,6.54909731675874,7.64237727883732,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,4.34392854273986,4.57500602818627,10.4293112253677,7.12679712788333,6.13717097592793,3.32460871295296,3.24482526135515,0,0,0,0,0,0.459804208866946,0.180062129805349,0.30140963567143,0.408218994907967,0.384341160854549,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,9.67303356365274,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.81308047821288,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,9.03602948187307,7.36520378411483,6.87474616127276,9.6237782112465,3.42541259885321,4.5323633843382,6.07520250208625,7.20513925158753,2.26571204492102,5.1776031175182,0.31136204275253,0,0.853668028770671,0.972426868273176,1.67690530102386,2.02227859295016,1.55572709461131,1.03017528619447,0.962757628775446,1.26348605881899,1.01391719956096,0.377252682772152,1.03005658216871,0.768301828858431,0.689225627467359,1.90517476513229,1.27472758539341,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,1.24233064311536,1.1921809497366,1.59881058295561,1.31753132581463,1.09998990259179,0.914639864363863,0.526139422875686,1.22223702461276,0.561142271657738,1.18635018124174,1.37906275325789,1.22769312950907,1.54936841185966,0.964533054905707,2.74791635731741,1.40358965067245,1.28922632428979,0.382576664137687,0,0|short_description=p@chr14:67529914..67529930,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:67529914..67529930,- | |||
|description=CAGE_peak_at_chr14:67529914..67529930,- | |||
|id=chr14:67529914..67529930,- | |||
|ontology_enrichment_celltype=CL:0000117!1.78e-20!23;CL:0000337!1.78e-20!23;CL:0000540!4.76e-19!33;CL:0000047!4.76e-19!33;CL:0000031!4.76e-19!33;CL:0000404!4.76e-19!33;CL:0000393!2.47e-14!39;CL:0000211!2.47e-14!39;CL:0000221!4.65e-13!44;CL:0000133!4.65e-13!44;CL:0002319!1.04e-12!43;CL:0000055!1.98e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-30,23;CL:0000337,1.41e-30,23;CL:0000540,1.11e-20,33;CL:0000047,1.11e-20,33;CL:0000031,1.11e-20,33;CL:0000404,1.11e-20,33;CL:0000393,2.34e-16,39;CL:0000211,2.34e-16,39;CL:0002319,3.67e-14,43;CL:0000221,1.12e-13,44;CL:0000133,1.12e-13,44;CL:0002609,1.09e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.00e-31!73;UBERON:0005743!4.00e-31!73;UBERON:0000073!1.24e-30!75;UBERON:0001016!1.24e-30!75;UBERON:0001049!4.34e-28!52;UBERON:0005068!4.34e-28!52;UBERON:0006241!4.34e-28!52;UBERON:0007135!4.34e-28!52;UBERON:0002346!5.86e-28!71;UBERON:0003075!5.86e-28!71;UBERON:0007284!5.86e-28!71;UBERON:0002020!3.45e-26!34;UBERON:0000033!1.42e-25!63;UBERON:0004121!1.81e-25!102;UBERON:0000924!1.81e-25!102;UBERON:0006601!1.81e-25!102;UBERON:0000955!1.87e-25!50;UBERON:0006238!1.87e-25!50;UBERON:0002616!3.90e-25!49;UBERON:0003056!6.99e-23!49;UBERON:0003080!2.18e-22!40;UBERON:0002780!1.40e-21!39;UBERON:0001890!1.40e-21!39;UBERON:0006240!1.40e-21!39;UBERON:0002791!1.52e-21!29;UBERON:0003528!1.52e-21!29;UBERON:0001893!1.52e-21!29;UBERON:0007811!2.02e-14!86;UBERON:0000956!3.27e-14!21;UBERON:0001869!3.27e-14!21;UBERON:0000203!3.27e-14!21;UBERON:0000153!2.79e-12!94;UBERON:0002619!1.74e-11!17;UBERON:0002021!6.95e-10!10;UBERON:0000411!6.95e-10!10;UBERON:0001950!6.95e-10!10;UBERON:0002420!1.26e-08!8;UBERON:0007245!1.26e-08!8;UBERON:0010009!1.26e-08!8;UBERON:0010011!1.26e-08!8;UBERON:0000454!1.26e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.06e-40,34;UBERON:0000073,3.01e-36,54;UBERON:0001049,9.59e-34,52;UBERON:0005068,9.59e-34,52;UBERON:0006241,9.59e-34,52;UBERON:0007135,9.59e-34,52;UBERON:0003528,6.01e-33,29;UBERON:0002791,6.01e-33,29;UBERON:0001893,6.01e-33,29;UBERON:0001017,4.20e-32,73;UBERON:0001016,6.82e-31,75;UBERON:0003080,2.39e-27,40;UBERON:0002346,1.27e-26,64;UBERON:0003075,1.27e-26,64;UBERON:0007284,1.27e-26,64;UBERON:0002780,3.60e-26,39;UBERON:0001890,3.60e-26,39;UBERON:0006240,3.60e-26,39;UBERON:0002616,4.06e-26,46;UBERON:0000955,2.38e-25,47;UBERON:0006238,2.38e-25,47;UBERON:0010371,6.77e-22,73;UBERON:0000956,1.28e-21,21;UBERON:0001869,1.28e-21,21;UBERON:0000203,1.28e-21,21;UBERON:0004121,1.28e-21,95;UBERON:0000924,1.28e-21,95;UBERON:0006601,1.28e-21,95;UBERON:0003056,1.35e-20,49;UBERON:0002619,2.00e-17,17;UBERON:0010314,5.17e-15,92;UBERON:0002021,2.60e-14,10;UBERON:0000411,2.60e-14,10;UBERON:0001950,2.60e-14,10;UBERON:0002420,2.19e-12,8;UBERON:0007245,2.19e-12,8;UBERON:0010009,2.19e-12,8;UBERON:0010011,2.19e-12,8;UBERON:0000454,2.19e-12,8;UBERON:0000025,2.39e-09,114;UBERON:0002240,4.55e-09,6;UBERON:0005174,4.55e-09,6;UBERON:0001137,4.55e-09,6;UBERON:0000369,8.81e-09,5;UBERON:0002435,8.81e-09,5;UBERON:0000204,8.81e-09,5;UBERON:0010082,8.81e-09,5;UBERON:0001948,4.12e-08,5;UBERON:0002315,4.12e-08,5;UBERON:0004111,4.54e-08,122;UBERON:0003076,8.05e-07,12;UBERON:0003057,8.05e-07,12 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,8.46385566835253,9.50747105259269,0,0,0,0,0,0,0,1.8664130215526,1.62007125998029,1.47227472945967,5.14171771926846,6.62605622854841,2.81728838194394,3.45043695665651,6.43453150627015,2.20231761998777,4.08599481872601,5.06901559745603,10.5509030184155,11.4359554503012,7.8137005583514,4.74611098302348,4.50210088025344,6.26472815884921,6.18720029494702,6.54909731675874,7.64237727883732,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,4.34392854273986,4.57500602818627,10.4293112253677,7.12679712788333,6.13717097592793,3.32460871295296,3.24482526135515,0,0,0,0,0,0.459804208866946,0.180062129805349,0.30140963567143,0.408218994907967,0.384341160854549,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,9.67303356365274,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.81308047821288,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,9.03602948187307,7.36520378411483,6.87474616127276,9.6237782112465,3.42541259885321,4.5323633843382,6.07520250208625,7.20513925158753,2.26571204492102,5.1776031175182,0.31136204275253,0,0.853668028770671,0.972426868273176,1.67690530102386,2.02227859295016,1.55572709461131,1.03017528619447,0.962757628775446,1.26348605881899,1.01391719956096,0.377252682772152,1.03005658216871,0.768301828858431,0.689225627467359,1.90517476513229,1.27472758539341,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,1.24233064311536,1.1921809497366,1.59881058295561,1.31753132581463,1.09998990259179,0.914639864363863,0.526139422875686,1.22223702461276,0.561142271657738,1.18635018124174,1.37906275325789,1.22769312950907,1.54936841185966,0.964533054905707,2.74791635731741,1.40358965067245,1.28922632428979,0.382576664137687,0,0 | |||
|short_description=p@chr14:67529914..67529930,- | |||
}} |
Latest revision as of 16:54, 4 August 2015
Short description: | p@chr14:67529914..67529930, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:67529914..67529930, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.41e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.41e-30 | 23 |
neuron | 1.11e-20 | 33 |
neuronal stem cell | 1.11e-20 | 33 |
neuroblast | 1.11e-20 | 33 |
electrically signaling cell | 1.11e-20 | 33 |
electrically responsive cell | 2.34e-16 | 39 |
electrically active cell | 2.34e-16 | 39 |
neural cell | 3.67e-14 | 43 |
ectodermal cell | 1.12e-13 | 44 |
neurectodermal cell | 1.12e-13 | 44 |
neuron of cerebral cortex | 1.09e-07 | 6 |