FFCP PHASE1:Mm9::chr12:16660339..16660350,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=491|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:16660339..16660350,+|id=chr12:16660339..16660350,+|ontology_enrichment_celltype=CL:0002319!9.40e-09!43;CL:0000221!1.81e-08!44;CL:0000133!1.81e-08!44;CL:0002453!3.85e-08!8;CL:0002614!6.11e-08!3;CL:0002610!7.85e-08!3;CL:0000117!1.11e-07!23;CL:0000337!1.11e-07!23;CL:0000055!5.28e-07!50|ontology_enrichment_celltype_v019_2=CL:0002614,4.16e-10,3;CL:0002610,5.81e-10,3;CL:0000117,7.08e-09,23;CL:0000337,7.08e-09,23;CL:0002319,3.01e-07,43;CL:0000221,4.99e-07,44;CL:0000133,4.99e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.69e-33!73;UBERON:0005743!1.69e-33!73;UBERON:0000073!2.28e-32!75;UBERON:0001016!2.28e-32!75;UBERON:0001049!5.35e-29!52;UBERON:0005068!5.35e-29!52;UBERON:0006241!5.35e-29!52;UBERON:0007135!5.35e-29!52;UBERON:0000955!6.17e-29!50;UBERON:0006238!6.17e-29!50;UBERON:0002616!2.24e-27!49;UBERON:0004121!1.93e-21!102;UBERON:0000924!1.93e-21!102;UBERON:0006601!1.93e-21!102;UBERON:0000033!2.00e-21!63;UBERON:0002020!1.44e-19!34;UBERON:0002346!3.29e-19!71;UBERON:0003075!3.29e-19!71;UBERON:0007284!3.29e-19!71;UBERON:0002021!4.00e-18!10;UBERON:0000411!4.00e-18!10;UBERON:0001950!4.00e-18!10;UBERON:0003076!8.14e-18!12;UBERON:0003057!8.14e-18!12;UBERON:0002791!9.21e-15!29;UBERON:0003528!9.21e-15!29;UBERON:0001893!9.21e-15!29;UBERON:0003080!1.46e-14!40;UBERON:0007811!9.98e-14!86;UBERON:0002298!1.77e-13!6;UBERON:0002780!2.99e-13!39;UBERON:0001890!2.99e-13!39;UBERON:0006240!2.99e-13!39;UBERON:0002619!5.12e-12!17;UBERON:0000153!6.08e-12!94;UBERON:0000956!2.51e-11!21;UBERON:0001869!2.51e-11!21;UBERON:0000203!2.51e-11!21;UBERON:0004733!2.91e-11!6;UBERON:0004732!2.91e-11!6;UBERON:0002028!2.91e-11!6;UBERON:0007277!2.91e-11!6;UBERON:0003056!5.33e-11!49;UBERON:0000025!7.78e-11!114;UBERON:0002950!7.80e-10!4;UBERON:0001891!7.80e-10!4;UBERON:0009616!7.80e-10!4;UBERON:0004111!1.27e-09!122;UBERON:0002240!3.34e-08!6;UBERON:0005174!3.34e-08!6;UBERON:0001137!3.34e-08!6;UBERON:0002038!6.11e-08!3;UBERON:0002308!6.11e-08!3;UBERON:0009663!6.11e-08!3;UBERON:0009661!6.11e-08!3;UBERON:0006331!6.11e-08!3;UBERON:0000125!6.11e-08!3;UBERON:0004684!7.85e-08!3;UBERON:0002275!7.85e-08!3;UBERON:0002037!1.28e-07!4;UBERON:0002680!1.28e-07!4;UBERON:0001895!1.28e-07!4;UBERON:0010092!1.28e-07!4;UBERON:0006215!1.28e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.97e-31,73;UBERON:0001016,2.90e-30,75;UBERON:0000073,5.21e-30,54;UBERON:0001049,9.36e-26,52;UBERON:0005068,9.36e-26,52;UBERON:0006241,9.36e-26,52;UBERON:0007135,9.36e-26,52;UBERON:0004121,1.18e-22,95;UBERON:0000924,1.18e-22,95;UBERON:0006601,1.18e-22,95;UBERON:0000955,1.22e-21,47;UBERON:0006238,1.22e-21,47;UBERON:0002346,5.84e-20,64;UBERON:0003075,5.84e-20,64;UBERON:0007284,5.84e-20,64;UBERON:0002616,5.97e-20,46;UBERON:0002020,1.20e-19,34;UBERON:0010371,7.30e-17,73;UBERON:0003080,1.59e-16,40;UBERON:0003528,9.54e-16,29;UBERON:0002791,9.54e-16,29;UBERON:0001893,9.54e-16,29;UBERON:0002021,1.23e-15,10;UBERON:0000411,1.23e-15,10;UBERON:0001950,1.23e-15,10;UBERON:0002780,7.20e-15,39;UBERON:0001890,7.20e-15,39;UBERON:0006240,7.20e-15,39;UBERON:0003056,8.48e-13,49;UBERON:0002950,1.22e-12,4;UBERON:0001891,1.22e-12,4;UBERON:0009616,1.22e-12,4;UBERON:0010286,1.22e-12,4;UBERON:0010314,2.59e-12,92;UBERON:0002619,4.75e-11,17;UBERON:0000956,6.78e-11,21;UBERON:0001869,6.78e-11,21;UBERON:0000203,6.78e-11,21;UBERON:0003076,3.33e-10,12;UBERON:0003057,3.33e-10,12;UBERON:0002038,4.16e-10,3;UBERON:0009663,4.16e-10,3;UBERON:0009661,4.16e-10,3;UBERON:0000125,4.16e-10,3;UBERON:0002308,4.16e-10,3;UBERON:0004684,5.81e-10,3;UBERON:0002275,5.81e-10,3;UBERON:0000025,6.05e-09,114;UBERON:0004111,5.06e-08,122;UBERON:0011216,5.55e-08,194;UBERON:0002240,2.53e-07,6;UBERON:0005174,2.53e-07,6;UBERON:0001137,2.53e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0,0,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,2.09720077362883,6.91592949578798,0,0,0,5.14171771926846,1.98781686856452,0,0,0,12.1127469099328,6.89511625660014,6.45147439676223,0,0,0,11.4465029590566,11.2552522006336,8.70950012327818,1.47314292736834,0.427115042397309,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63502717310392,0.83778682725382,0,0,0,0,4.94309110035915,2.28750301409313,0,5.21472960576829,4.09144731728529,4.98691306942944,5.67844420737152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,3.36463917702604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,4.68846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,0.572895513439397,3.43706364687375,2.05524755931193,4.5323633843382,1.35004500046361,4.95353323546643,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr12:16660339..16660350,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=491 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:16660339..16660350,+ | |||
|description=CAGE_peak_at_chr12:16660339..16660350,+ | |||
|id=chr12:16660339..16660350,+ | |||
|ontology_enrichment_celltype=CL:0002319!9.40e-09!43;CL:0000221!1.81e-08!44;CL:0000133!1.81e-08!44;CL:0002453!3.85e-08!8;CL:0002614!6.11e-08!3;CL:0002610!7.85e-08!3;CL:0000117!1.11e-07!23;CL:0000337!1.11e-07!23;CL:0000055!5.28e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,4.16e-10,3;CL:0002610,5.81e-10,3;CL:0000117,7.08e-09,23;CL:0000337,7.08e-09,23;CL:0002319,3.01e-07,43;CL:0000221,4.99e-07,44;CL:0000133,4.99e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.69e-33!73;UBERON:0005743!1.69e-33!73;UBERON:0000073!2.28e-32!75;UBERON:0001016!2.28e-32!75;UBERON:0001049!5.35e-29!52;UBERON:0005068!5.35e-29!52;UBERON:0006241!5.35e-29!52;UBERON:0007135!5.35e-29!52;UBERON:0000955!6.17e-29!50;UBERON:0006238!6.17e-29!50;UBERON:0002616!2.24e-27!49;UBERON:0004121!1.93e-21!102;UBERON:0000924!1.93e-21!102;UBERON:0006601!1.93e-21!102;UBERON:0000033!2.00e-21!63;UBERON:0002020!1.44e-19!34;UBERON:0002346!3.29e-19!71;UBERON:0003075!3.29e-19!71;UBERON:0007284!3.29e-19!71;UBERON:0002021!4.00e-18!10;UBERON:0000411!4.00e-18!10;UBERON:0001950!4.00e-18!10;UBERON:0003076!8.14e-18!12;UBERON:0003057!8.14e-18!12;UBERON:0002791!9.21e-15!29;UBERON:0003528!9.21e-15!29;UBERON:0001893!9.21e-15!29;UBERON:0003080!1.46e-14!40;UBERON:0007811!9.98e-14!86;UBERON:0002298!1.77e-13!6;UBERON:0002780!2.99e-13!39;UBERON:0001890!2.99e-13!39;UBERON:0006240!2.99e-13!39;UBERON:0002619!5.12e-12!17;UBERON:0000153!6.08e-12!94;UBERON:0000956!2.51e-11!21;UBERON:0001869!2.51e-11!21;UBERON:0000203!2.51e-11!21;UBERON:0004733!2.91e-11!6;UBERON:0004732!2.91e-11!6;UBERON:0002028!2.91e-11!6;UBERON:0007277!2.91e-11!6;UBERON:0003056!5.33e-11!49;UBERON:0000025!7.78e-11!114;UBERON:0002950!7.80e-10!4;UBERON:0001891!7.80e-10!4;UBERON:0009616!7.80e-10!4;UBERON:0004111!1.27e-09!122;UBERON:0002240!3.34e-08!6;UBERON:0005174!3.34e-08!6;UBERON:0001137!3.34e-08!6;UBERON:0002038!6.11e-08!3;UBERON:0002308!6.11e-08!3;UBERON:0009663!6.11e-08!3;UBERON:0009661!6.11e-08!3;UBERON:0006331!6.11e-08!3;UBERON:0000125!6.11e-08!3;UBERON:0004684!7.85e-08!3;UBERON:0002275!7.85e-08!3;UBERON:0002037!1.28e-07!4;UBERON:0002680!1.28e-07!4;UBERON:0001895!1.28e-07!4;UBERON:0010092!1.28e-07!4;UBERON:0006215!1.28e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.97e-31,73;UBERON:0001016,2.90e-30,75;UBERON:0000073,5.21e-30,54;UBERON:0001049,9.36e-26,52;UBERON:0005068,9.36e-26,52;UBERON:0006241,9.36e-26,52;UBERON:0007135,9.36e-26,52;UBERON:0004121,1.18e-22,95;UBERON:0000924,1.18e-22,95;UBERON:0006601,1.18e-22,95;UBERON:0000955,1.22e-21,47;UBERON:0006238,1.22e-21,47;UBERON:0002346,5.84e-20,64;UBERON:0003075,5.84e-20,64;UBERON:0007284,5.84e-20,64;UBERON:0002616,5.97e-20,46;UBERON:0002020,1.20e-19,34;UBERON:0010371,7.30e-17,73;UBERON:0003080,1.59e-16,40;UBERON:0003528,9.54e-16,29;UBERON:0002791,9.54e-16,29;UBERON:0001893,9.54e-16,29;UBERON:0002021,1.23e-15,10;UBERON:0000411,1.23e-15,10;UBERON:0001950,1.23e-15,10;UBERON:0002780,7.20e-15,39;UBERON:0001890,7.20e-15,39;UBERON:0006240,7.20e-15,39;UBERON:0003056,8.48e-13,49;UBERON:0002950,1.22e-12,4;UBERON:0001891,1.22e-12,4;UBERON:0009616,1.22e-12,4;UBERON:0010286,1.22e-12,4;UBERON:0010314,2.59e-12,92;UBERON:0002619,4.75e-11,17;UBERON:0000956,6.78e-11,21;UBERON:0001869,6.78e-11,21;UBERON:0000203,6.78e-11,21;UBERON:0003076,3.33e-10,12;UBERON:0003057,3.33e-10,12;UBERON:0002038,4.16e-10,3;UBERON:0009663,4.16e-10,3;UBERON:0009661,4.16e-10,3;UBERON:0000125,4.16e-10,3;UBERON:0002308,4.16e-10,3;UBERON:0004684,5.81e-10,3;UBERON:0002275,5.81e-10,3;UBERON:0000025,6.05e-09,114;UBERON:0004111,5.06e-08,122;UBERON:0011216,5.55e-08,194;UBERON:0002240,2.53e-07,6;UBERON:0005174,2.53e-07,6;UBERON:0001137,2.53e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0,0,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,2.09720077362883,6.91592949578798,0,0,0,5.14171771926846,1.98781686856452,0,0,0,12.1127469099328,6.89511625660014,6.45147439676223,0,0,0,11.4465029590566,11.2552522006336,8.70950012327818,1.47314292736834,0.427115042397309,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63502717310392,0.83778682725382,0,0,0,0,4.94309110035915,2.28750301409313,0,5.21472960576829,4.09144731728529,4.98691306942944,5.67844420737152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,3.36463917702604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,4.68846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,0.572895513439397,3.43706364687375,2.05524755931193,4.5323633843382,1.35004500046361,4.95353323546643,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr12:16660339..16660350,+ | |||
}} |
Latest revision as of 21:17, 4 August 2015
Short description: | p@chr12:16660339..16660350, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16660339..16660350, + |
Coexpression cluster: | MCL_coexpression_mm9:491 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 4.16e-10 | 3 |
raphe nuclei neuron | 5.81e-10 | 3 |
CNS neuron (sensu Vertebrata) | 7.08e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.08e-09 | 23 |
neural cell | 3.01e-07 | 43 |
ectodermal cell | 4.99e-07 | 44 |
neurectodermal cell | 4.99e-07 | 44 |