FFCP PHASE1:Mm9::chr2:30271616..30271667,+: Difference between revisions
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{{FFCP|EntrezGene=110854|HGNC=|MCL_coexpression_id=3343|UniProt=A2AWF0,A2AWE9,D6RFC2|association_with_transcript=0bp_to_ENSMUST00000113601,ENSMUST00000113603,ENSMUST00000152165_5end|description=CAGE_peak_2_at_Ppp2r4_5end|id=chr2:30271616..30271667,+|ontology_enrichment_celltype=CL:0002319!3.67e-14!43;CL:0000221!1.18e-13!44;CL:0000133!1.18e-13!44;CL:0000723!1.01e-11!91;CL:0000048!1.01e-11!91;CL:0000540!1.25e-11!33;CL:0000047!1.25e-11!33;CL:0000031!1.25e-11!33;CL:0000404!1.25e-11!33;CL:0000034!3.08e-11!97;CL:0000117!6.36e-11!23;CL:0000337!6.36e-11!23;CL:0000049!1.84e-10!19;CL:0000763!7.59e-09!16;CL:0000055!1.06e-08!50;CL:0000988!1.49e-08!32;CL:0002032!1.49e-08!32;CL:0000037!1.49e-08!32;CL:0000566!1.49e-08!32;CL:0000837!1.49e-08!32;CL:0000219!4.61e-08!54;CL:0000548!1.16e-07!115;CL:0000004!1.16e-07!115;CL:0000255!1.16e-07!115;CL:0000144!1.56e-07!121;CL:0000012!1.56e-07!121;CL:0000839!4.58e-07!13;CL:0000393!5.50e-07!39;CL:0000211!5.50e-07!39|ontology_enrichment_celltype_v019_2=CL:0002319,3.67e-14,43;CL:0000221,1.18e-13,44;CL:0000133,1.18e-13,44;CL:0000723,1.01e-11,91;CL:0000048,1.01e-11,91;CL:0000540,1.25e-11,33;CL:0000047,1.25e-11,33;CL:0000031,1.25e-11,33;CL:0000404,1.25e-11,33;CL:0000034,3.08e-11,97;CL:0000117,6.36e-11,23;CL:0000337,6.36e-11,23;CL:0000049,1.84e-10,19;CL:0000763,7.59e-09,16;CL:0000988,1.49e-08,32;CL:0002032,1.49e-08,32;CL:0000037,1.49e-08,32;CL:0000837,1.49e-08,32;CL:0000219,4.61e-08,54;CL:0000839,4.58e-07,13;CL:0000393,5.50e-07,39;CL:0000211,5.50e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.61e-19!73;UBERON:0005743!3.61e-19!73;UBERON:0000073!2.35e-18!75;UBERON:0001016!2.35e-18!75;UBERON:0002020!4.97e-13!34;UBERON:0001049!1.77e-12!52;UBERON:0005068!1.77e-12!52;UBERON:0006241!1.77e-12!52;UBERON:0007135!1.77e-12!52;UBERON:0000955!8.14e-12!50;UBERON:0006238!8.14e-12!50;UBERON:0002616!1.15e-11!49;UBERON:0002791!5.96e-11!29;UBERON:0003528!5.96e-11!29;UBERON:0001893!5.96e-11!29;UBERON:0002346!2.55e-10!71;UBERON:0003075!2.55e-10!71;UBERON:0007284!2.55e-10!71;UBERON:0004121!2.79e-10!102;UBERON:0000924!2.79e-10!102;UBERON:0006601!2.79e-10!102;UBERON:0000153!8.14e-10!94;UBERON:0007811!1.06e-09!86;UBERON:0003080!1.73e-09!40;UBERON:0002390!2.43e-09!45;UBERON:0003061!2.43e-09!45;UBERON:0002780!4.13e-09!39;UBERON:0001890!4.13e-09!39;UBERON:0006240!4.13e-09!39;UBERON:0000033!4.70e-09!63;UBERON:0002371!5.98e-09!16;UBERON:0002193!8.64e-09!48;UBERON:0003056!1.77e-08!49;UBERON:0000956!4.89e-08!21;UBERON:0001869!4.89e-08!21;UBERON:0000203!4.89e-08!21;UBERON:0002619!5.73e-07!17;UBERON:0001474!6.29e-07!22;UBERON:0004765!6.29e-07!22;UBERON:0001434!6.29e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.61e-19,73;UBERON:0001016,2.35e-18,75;UBERON:0000073,1.00e-13,54;UBERON:0002020,4.97e-13,34;UBERON:0001049,1.77e-12,52;UBERON:0005068,1.77e-12,52;UBERON:0006241,1.77e-12,52;UBERON:0007135,1.77e-12,52;UBERON:0002346,3.90e-12,64;UBERON:0003075,3.90e-12,64;UBERON:0007284,3.90e-12,64;UBERON:0004121,1.32e-11,95;UBERON:0000924,1.32e-11,95;UBERON:0006601,1.32e-11,95;UBERON:0003528,5.96e-11,29;UBERON:0002791,5.96e-11,29;UBERON:0001893,5.96e-11,29;UBERON:0000955,1.16e-10,47;UBERON:0006238,1.16e-10,47;UBERON:0002616,1.63e-10,46;UBERON:0003080,1.73e-09,40;UBERON:0002390,2.43e-09,45;UBERON:0003061,2.43e-09,45;UBERON:0002780,4.13e-09,39;UBERON:0001890,4.13e-09,39;UBERON:0006240,4.13e-09,39;UBERON:0002371,5.98e-09,16;UBERON:0002193,8.64e-09,48;UBERON:0002405,8.64e-09,48;UBERON:0003056,1.77e-08,49;UBERON:0010371,2.05e-08,73;UBERON:0000956,4.89e-08,21;UBERON:0001869,4.89e-08,21;UBERON:0000203,4.89e-08,21;UBERON:0002619,5.73e-07,17;UBERON:0001474,6.29e-07,22;UBERON:0004765,6.29e-07,22;UBERON:0001434,6.29e-07,22|phase1_expression=31.3891740325396,11.5161884520989,12.2849794635175,10.8887116070459,12.0214975187123,20.8170297170743,27.566291590272,37.3166404746155,18.8656887683233,25.0449043164533,52.906352181681,46.9858016482531,31.5009343073419,31.8210264805151,93.6038430702012,78.5604037472525,76.252244715968,56.6254586818037,50.8694548677291,56.01943403734,49.1550217073183,69.1065020358162,74.7031396937355,29.918583062367,29.3643879765978,14.9300310669905,19.8150518233174,19.39241094173,20.5225293012884,23.1867719379136,24.3903561720835,82.5539875497521,88.5693294121781,63.3926724061755,41.016930004681,38.5664377231702,39.2005164023749,16.7412652294763,17.1893775795236,25.1291397107423,9.99993529652724,10.9287277593351,11.6522484727477,11.9601977076798,12.8748702648783,10.6457116253775,89.1926132556765,72.3843519183082,57.7774660591661,46.2743159796795,53.0548537960124,102.06432069913,44.4623906053001,39.8949178106239,49.4057884739422,25.9832030396306,25.7880095944881,15.9858348606007,72.0246600660168,87.8125025591575,95.0747105259269,44.3886337010563,68.4756993005577,68.842328372027,101.853235344398,76.0213722992327,70.1064258613067,100.665195994247,52.6743230527066,60.4826603725974,60.573588869198,69.4131892101243,73.9909612187905,60.0204916153275,53.86515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825723,34.4471007418619,34.6322519928417,33.1689262935372,30.9148274154986,33.6729230640439,30.8275338430106,39.2799590160417,32.031454893527,36.3481539965829,40.9231043169689,33.0015471726108,33.1799370887563,52.9598425228445,36.0254677005929,27.2886238641339,22.5720231841235,34.1916699635249,29.2153472881731|short_description=p2@Ppp2r4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110854 | |||
|HGNC= | |||
|MCL_coexpression_id=3343 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AWF0,uniprot:A2AWE9,uniprot:D6RFC2 | |||
|association_with_transcript=0bp_to_ENSMUST00000113601,ENSMUST00000113603,ENSMUST00000152165_5end | |||
|cluster_id=chr2:30271616..30271667,+ | |||
|description=CAGE_peak_2_at_Ppp2r4_5end | |||
|id=chr2:30271616..30271667,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.67e-14!43;CL:0000221!1.18e-13!44;CL:0000133!1.18e-13!44;CL:0000723!1.01e-11!91;CL:0000048!1.01e-11!91;CL:0000540!1.25e-11!33;CL:0000047!1.25e-11!33;CL:0000031!1.25e-11!33;CL:0000404!1.25e-11!33;CL:0000034!3.08e-11!97;CL:0000117!6.36e-11!23;CL:0000337!6.36e-11!23;CL:0000049!1.84e-10!19;CL:0000763!7.59e-09!16;CL:0000055!1.06e-08!50;CL:0000988!1.49e-08!32;CL:0002032!1.49e-08!32;CL:0000037!1.49e-08!32;CL:0000566!1.49e-08!32;CL:0000837!1.49e-08!32;CL:0000219!4.61e-08!54;CL:0000548!1.16e-07!115;CL:0000004!1.16e-07!115;CL:0000255!1.16e-07!115;CL:0000144!1.56e-07!121;CL:0000012!1.56e-07!121;CL:0000839!4.58e-07!13;CL:0000393!5.50e-07!39;CL:0000211!5.50e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.67e-14,43;CL:0000221,1.18e-13,44;CL:0000133,1.18e-13,44;CL:0000723,1.01e-11,91;CL:0000048,1.01e-11,91;CL:0000540,1.25e-11,33;CL:0000047,1.25e-11,33;CL:0000031,1.25e-11,33;CL:0000404,1.25e-11,33;CL:0000034,3.08e-11,97;CL:0000117,6.36e-11,23;CL:0000337,6.36e-11,23;CL:0000049,1.84e-10,19;CL:0000763,7.59e-09,16;CL:0000988,1.49e-08,32;CL:0002032,1.49e-08,32;CL:0000037,1.49e-08,32;CL:0000837,1.49e-08,32;CL:0000219,4.61e-08,54;CL:0000839,4.58e-07,13;CL:0000393,5.50e-07,39;CL:0000211,5.50e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.61e-19!73;UBERON:0005743!3.61e-19!73;UBERON:0000073!2.35e-18!75;UBERON:0001016!2.35e-18!75;UBERON:0002020!4.97e-13!34;UBERON:0001049!1.77e-12!52;UBERON:0005068!1.77e-12!52;UBERON:0006241!1.77e-12!52;UBERON:0007135!1.77e-12!52;UBERON:0000955!8.14e-12!50;UBERON:0006238!8.14e-12!50;UBERON:0002616!1.15e-11!49;UBERON:0002791!5.96e-11!29;UBERON:0003528!5.96e-11!29;UBERON:0001893!5.96e-11!29;UBERON:0002346!2.55e-10!71;UBERON:0003075!2.55e-10!71;UBERON:0007284!2.55e-10!71;UBERON:0004121!2.79e-10!102;UBERON:0000924!2.79e-10!102;UBERON:0006601!2.79e-10!102;UBERON:0000153!8.14e-10!94;UBERON:0007811!1.06e-09!86;UBERON:0003080!1.73e-09!40;UBERON:0002390!2.43e-09!45;UBERON:0003061!2.43e-09!45;UBERON:0002780!4.13e-09!39;UBERON:0001890!4.13e-09!39;UBERON:0006240!4.13e-09!39;UBERON:0000033!4.70e-09!63;UBERON:0002371!5.98e-09!16;UBERON:0002193!8.64e-09!48;UBERON:0003056!1.77e-08!49;UBERON:0000956!4.89e-08!21;UBERON:0001869!4.89e-08!21;UBERON:0000203!4.89e-08!21;UBERON:0002619!5.73e-07!17;UBERON:0001474!6.29e-07!22;UBERON:0004765!6.29e-07!22;UBERON:0001434!6.29e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.61e-19,73;UBERON:0001016,2.35e-18,75;UBERON:0000073,1.00e-13,54;UBERON:0002020,4.97e-13,34;UBERON:0001049,1.77e-12,52;UBERON:0005068,1.77e-12,52;UBERON:0006241,1.77e-12,52;UBERON:0007135,1.77e-12,52;UBERON:0002346,3.90e-12,64;UBERON:0003075,3.90e-12,64;UBERON:0007284,3.90e-12,64;UBERON:0004121,1.32e-11,95;UBERON:0000924,1.32e-11,95;UBERON:0006601,1.32e-11,95;UBERON:0003528,5.96e-11,29;UBERON:0002791,5.96e-11,29;UBERON:0001893,5.96e-11,29;UBERON:0000955,1.16e-10,47;UBERON:0006238,1.16e-10,47;UBERON:0002616,1.63e-10,46;UBERON:0003080,1.73e-09,40;UBERON:0002390,2.43e-09,45;UBERON:0003061,2.43e-09,45;UBERON:0002780,4.13e-09,39;UBERON:0001890,4.13e-09,39;UBERON:0006240,4.13e-09,39;UBERON:0002371,5.98e-09,16;UBERON:0002193,8.64e-09,48;UBERON:0002405,8.64e-09,48;UBERON:0003056,1.77e-08,49;UBERON:0010371,2.05e-08,73;UBERON:0000956,4.89e-08,21;UBERON:0001869,4.89e-08,21;UBERON:0000203,4.89e-08,21;UBERON:0002619,5.73e-07,17;UBERON:0001474,6.29e-07,22;UBERON:0004765,6.29e-07,22;UBERON:0001434,6.29e-07,22 | |||
|phase1_expression=31.3891740325396,11.5161884520989,12.2849794635175,10.8887116070459,12.0214975187123,20.8170297170743,27.566291590272,37.3166404746155,18.8656887683233,25.0449043164533,52.906352181681,46.9858016482531,31.5009343073419,31.8210264805151,93.6038430702012,78.5604037472525,76.252244715968,56.6254586818037,50.8694548677291,56.01943403734,49.1550217073183,69.1065020358162,74.7031396937355,29.918583062367,29.3643879765978,14.9300310669905,19.8150518233174,19.39241094173,20.5225293012884,23.1867719379136,24.3903561720835,82.5539875497521,88.5693294121781,63.3926724061755,41.016930004681,38.5664377231702,39.2005164023749,16.7412652294763,17.1893775795236,25.1291397107423,9.99993529652724,10.9287277593351,11.6522484727477,11.9601977076798,12.8748702648783,10.6457116253775,89.1926132556765,72.3843519183082,57.7774660591661,46.2743159796795,53.0548537960124,102.06432069913,44.4623906053001,39.8949178106239,49.4057884739422,25.9832030396306,25.7880095944881,15.9858348606007,72.0246600660168,87.8125025591575,95.0747105259269,44.3886337010563,68.4756993005577,68.842328372027,101.853235344398,76.0213722992327,70.1064258613067,100.665195994247,52.6743230527066,60.4826603725974,60.573588869198,69.4131892101243,73.9909612187905,60.0204916153275,53.8651547122488,91.9218786610021,83.6880695595354,53.8840566719492,60.0601545031912,80.978180666339,65.7796157501325,68.7605649134923,67.5622857583342,70.9080888639917,57.7577376596342,61.2827457785229,59.2266192124268,58.3430265433191,24.3081080599521,35.8209194906163,22.0297011413275,14.6272059086836,6.11974200336975,10.2543606411185,10.3964226791627,7.16843019355737,22.4711072210803,49.4247935476367,51.9572009205738,55.8276527726338,29.9996484124329,23.0987659345772,22.9324715735981,21.3320010945999,33.5561113567382,34.2035818391383,42.9695778262566,21.8091210263405,47.1266948237853,25.8289321972795,41.8099637506387,37.4492538323934,32.5167851131042,25.3214036128406,21.518733405834,34.0556462503421,10.3821886448437,24.2926919625452,56.615075324792,30.7357014900077,37.1013751013461,34.911018225736,27.9587641827183,36.5975996264434,38.5381940536757,28.8666472385708,96.4511752272658,60.5901758303342,85.1370521389534,62.4626966318111,40.2600530480391,59.8114716057235,51.1043501365293,37.3344567702283,54.8560437637239,51.4304803924792,26.7837526926332,38.0685330066885,40.1829185909543,28.6200924005605,43.8505892784312,40.6926724847247,46.9962158791961,40.2381863621359,32.8616290900914,36.5124102811822,39.6358294887653,28.1986674105527,46.5626864734939,41.7924437170881,41.5244653026919,44.2775379503701,40.0388038884861,29.253181987862,29.01528123352,39.4087848300616,82.8611561029617,84.4101135336266,88.9431753108205,30.4474885627188,34.0062786972589,36.912722599508,37.8791576936336,31.8758055430794,33.0131621578989,31.6246164860555,34.8755421819505,22.8860071039652,26.6586956859838,22.326775114757,16.2137619091711,16.3743985916372,19.5399602609035,13.6890547135579,56.9885760608785,46.307075570678,10.2429822724977,24.8583532663732,36.6855790920602,37.8545775132515,32.3457327918454,26.0171746764112,24.6839628667806,22.0661726290569,18.506633400236,22.0696599330175,20.8608223304224,18.3039954277859,23.5906545414135,20.6728463990471,24.4235996358404,19.9141273254367,56.1416986821122,39.4157368503564,42.8289395557706,37.8791469792285,35.8812101260108,28.5452786953597,27.6976032604247,18.4512684974503,21.8228231699511,19.7435462274881,3.85388415213294,61.5658440092387,65.0610273824702,72.6304623003078,76.4782657634656,58.3648726600849,40.4855104332458,44.8805974423265,29.1843408195064,22.2394744682346,8.62609239164127,11.9085103253921,14.6657706363843,10.1031551178845,11.6608318789243,8.68398338454061,19.0295785871603,38.8457394129494,38.6226994167601,46.6798985881767,38.7238909676028,31.1561638841777,27.1369750610056,19.3182311379221,33.5762856946187,33.8840975162626,27.9045845150602,21.7938208571932,27.2842271348115,22.4206040801343,48.2532108605671,73.9711729993445,17.2117495556663,20.4193192265502,47.6835252263742,46.1814045173281,30.819769730815,10.3513080153793,45.433183595941,53.8805467129361,58.5951641833213,50.1834475700359,45.228130838726,44.1599388030579,54.2446340244358,47.9299606974552,50.2015477992085,47.2342335140056,28.1041368712372,45.2286633314828,26.5505743746329,29.1997117661388,17.2568679841952,47.8277853225313,31.7439734812989,30.9312330799673,40.1610574317851,27.6691633149535,17.573123935439,20.7214225802178,30.3022771627013,19.5942789920206,12.6502330289999,16.5016869197099,26.2138496430417,41.23399053317,49.1562998374467,38.1519922356234,29.9704994855442,34.0684441619955,27.6442354611563,31.9688196570329,22.5284839741162,13.5572525352845,24.2581237860458,19.9512366059191,24.5425928577776,26.5376869683886,30.2012030327935,24.2928531622691,22.7355052571284,39.8664399322596,67.1522561535561,46.8498190276515,64.4476955246597,68.0010129786935,69.0305849991177,64.7442230174459,60.6822995078063,67.5965514723268,62.0517882381863,16.2294005062569,41.281847162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| |||
|short_description=p2@Ppp2r4 | |||
}} |
Revision as of 00:09, 5 August 2015
Short description: | p2@Ppp2r4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp2r4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3343 |
Association with transcript: | 0bp_to_ENSMUST00000113601, ENSMUST00000113603, ENSMUST00000152165_5end |
EntrezGene: | 110854 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.67e-14 | 43 |
ectodermal cell | 1.18e-13 | 44 |
neurectodermal cell | 1.18e-13 | 44 |
somatic stem cell | 1.01e-11 | 91 |
multi fate stem cell | 1.01e-11 | 91 |
neuron | 1.25e-11 | 33 |
neuronal stem cell | 1.25e-11 | 33 |
neuroblast | 1.25e-11 | 33 |
electrically signaling cell | 1.25e-11 | 33 |
stem cell | 3.08e-11 | 97 |
CNS neuron (sensu Vertebrata) | 6.36e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.36e-11 | 23 |
common myeloid progenitor | 1.84e-10 | 19 |
myeloid cell | 7.59e-09 | 16 |
hematopoietic cell | 1.49e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.49e-08 | 32 |
hematopoietic stem cell | 1.49e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.49e-08 | 32 |
motile cell | 4.61e-08 | 54 |
myeloid lineage restricted progenitor cell | 4.58e-07 | 13 |
electrically responsive cell | 5.50e-07 | 39 |
electrically active cell | 5.50e-07 | 39 |