FFCP PHASE1:Mm9::chr10:92623569..92623639,+: Difference between revisions
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{{FFCP|EntrezGene=237459|HGNC=|MCL_coexpression_id=7|UniProt=Q8K0D0,Q8C5H7|association_with_transcript=0bp_to_ENSMUST00000069965,NM_146239,uc007guk.2,uc007gul.2_5end|description=CAGE_peak_1_at_Cdk17_5end|id=chr10:92623569..92623639,+|ontology_enrichment_celltype=CL:0000221!7.00e-11!44;CL:0000133!7.00e-11!44;CL:0002319!1.42e-10!43;CL:0000540!7.78e-09!33;CL:0000047!7.78e-09!33;CL:0000031!7.78e-09!33;CL:0000404!7.78e-09!33;CL:0000055!1.34e-08!50;CL:0000393!3.12e-07!39;CL:0000211!3.12e-07!39;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,6.99e-11,44;CL:0000133,6.99e-11,44;CL:0002319,1.42e-10,43;CL:0000540,7.77e-09,33;CL:0000047,7.77e-09,33;CL:0000031,7.77e-09,33;CL:0000404,7.77e-09,33;CL:0000393,3.12e-07,39;CL:0000211,3.12e-07,39;CL:0000791,6.60e-07,9;CL:0000789,6.60e-07,9;CL:0002420,6.60e-07,9;CL:0002419,6.60e-07,9;CL:0000790,6.60e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.46e-22!75;UBERON:0001016!5.46e-22!75;UBERON:0001017!3.49e-21!73;UBERON:0005743!3.49e-21!73;UBERON:0007811!6.08e-18!86;UBERON:0000153!7.98e-16!94;UBERON:0001049!1.93e-15!52;UBERON:0005068!1.93e-15!52;UBERON:0006241!1.93e-15!52;UBERON:0007135!1.93e-15!52;UBERON:0000955!8.53e-15!50;UBERON:0006238!8.53e-15!50;UBERON:0002020!2.86e-14!34;UBERON:0002616!3.27e-14!49;UBERON:0002791!1.80e-13!29;UBERON:0003528!1.80e-13!29;UBERON:0001893!1.80e-13!29;UBERON:0003080!1.97e-13!40;UBERON:0002780!3.44e-13!39;UBERON:0001890!3.44e-13!39;UBERON:0006240!3.44e-13!39;UBERON:0000956!1.34e-11!21;UBERON:0001869!1.34e-11!21;UBERON:0000203!1.34e-11!21;UBERON:0004121!2.86e-10!102;UBERON:0000924!2.86e-10!102;UBERON:0006601!2.86e-10!102;UBERON:0002619!1.11e-09!17;UBERON:0000033!1.58e-09!63;UBERON:0002370!3.48e-09!23;UBERON:0000974!3.48e-09!23;UBERON:0004807!3.48e-09!23;UBERON:0005058!3.48e-09!23;UBERON:0003351!3.48e-09!23;UBERON:0009113!3.48e-09!23;UBERON:0003295!3.48e-09!23;UBERON:0009722!3.48e-09!23;UBERON:0005562!3.48e-09!23;UBERON:0007690!3.48e-09!23;UBERON:0002346!1.03e-08!71;UBERON:0003075!1.03e-08!71;UBERON:0007284!1.03e-08!71;UBERON:0003056!1.42e-08!49;UBERON:0000477!1.79e-08!154;UBERON:0003408!2.61e-08!24;UBERON:0006562!2.96e-08!24;UBERON:0001557!2.96e-08!24;UBERON:0001042!2.96e-08!24;UBERON:0008814!2.96e-08!24;UBERON:0009145!2.96e-08!24;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0004177!1.09e-07!29;UBERON:0000072!6.17e-07!27;UBERON:0000064!8.53e-07!99;UBERON:0000063!9.99e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.45e-22,75;UBERON:0001017,3.49e-21,73;UBERON:0001049,1.92e-15,52;UBERON:0005068,1.92e-15,52;UBERON:0006241,1.92e-15,52;UBERON:0007135,1.92e-15,52;UBERON:0000073,2.86e-15,54;UBERON:0000955,9.59e-15,47;UBERON:0006238,9.59e-15,47;UBERON:0002020,2.85e-14,34;UBERON:0002616,3.71e-14,46;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0003080,1.97e-13,40;UBERON:0002780,3.44e-13,39;UBERON:0001890,3.44e-13,39;UBERON:0006240,3.44e-13,39;UBERON:0004121,2.00e-12,95;UBERON:0000924,2.00e-12,95;UBERON:0006601,2.00e-12,95;UBERON:0000956,1.34e-11,21;UBERON:0001869,1.34e-11,21;UBERON:0000203,1.34e-11,21;UBERON:0002346,3.33e-11,64;UBERON:0003075,3.33e-11,64;UBERON:0007284,3.33e-11,64;UBERON:0002619,1.11e-09,17;UBERON:0002370,3.48e-09,23;UBERON:0000974,3.48e-09,23;UBERON:0004807,3.48e-09,23;UBERON:0005058,3.48e-09,23;UBERON:0003351,3.48e-09,23;UBERON:0009113,3.48e-09,23;UBERON:0003295,3.48e-09,23;UBERON:0009722,3.48e-09,23;UBERON:0005562,3.48e-09,23;UBERON:0007690,3.48e-09,23;UBERON:0010371,6.11e-09,73;UBERON:0003056,1.42e-08,49;UBERON:0003408,2.61e-08,24;UBERON:0006562,2.96e-08,24;UBERON:0001557,2.96e-08,24;UBERON:0001042,2.96e-08,24;UBERON:0008814,2.96e-08,24;UBERON:0009145,2.96e-08,24;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10;UBERON:0004177,1.09e-07,29;UBERON:0005057,1.09e-07,29;UBERON:0000072,6.17e-07,27|phase1_expression=13.2923543096979,1.04692622291808,0.454999239389536,0.30246421130683,0.500895729946347,1.17515490338323,1.63528848416868,88.5785998809213,719.993525083624,621.675381911215,209.913229044469,129.470214049431,66.2546824833766,65.740142619086,3.33109761815663,7.08663435864391,2.79824751251259,17.0349569293448,16.5908464662944,13.580468857537,26.9587229778891,9.4326403640841,7.57479388502913,3.03985603307473,1.60586496747019,0.57423196411502,1.29228598847722,1.29282739611533,1.14014051673824,1.26015064879965,1.55211357458713,8.25539875497521,6.1506478758457,0,0.866554859253824,0.664938581433969,0.204169356262369,4.18531630736908,5.4693474116666,2.09409497589519,2.35292595212406,2.04913645487534,3.39857247121808,4.28049181116963,7.50189291024408,10.6457116253775,6.25913075478431,23.3286917327078,10.7646229539891,12.2490836416799,12.8787507895334,17.2503077237966,33.724303817605,147.973876970314,126.035174678424,9.77585856936598,4.87106847895886,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11929,6.80220981265052,8.22312892865976,8.03536723231687,11.5530915453053,6.82282471762253,9.88569269571935,9.61994341068989,7.58496210506047,8.9635213366817,7.3517400263185,8.57328644309533,9.618399053423,7.7163688185482,8.24171801606613,9.56792980873583,7.20025430009372,7.0990322463735,7.86839426826159,9.88355633099834,9.50504742194839,9.89990912332615,9.51225458938417,8.15516105457313,8.01244271690584,8.97827634652382,6.76219603307793,8.66839444904958,6.95692773388472,8.52152626522813,12.5389297137742,15.7380664100906,8.18760629558929,11.1732948105115,12.0511649203371,8.16188250742207,9.7384490960577|short_description=p1@Cdk17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:237459 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K0D0,uniprot:Q8C5H7 | |||
|association_with_transcript=0bp_to_ENSMUST00000069965,NM_146239,uc007guk.2,uc007gul.2_5end | |||
|cluster_id=chr10:92623569..92623639,+ | |||
|description=CAGE_peak_1_at_Cdk17_5end | |||
|id=chr10:92623569..92623639,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.00e-11!44;CL:0000133!7.00e-11!44;CL:0002319!1.42e-10!43;CL:0000540!7.78e-09!33;CL:0000047!7.78e-09!33;CL:0000031!7.78e-09!33;CL:0000404!7.78e-09!33;CL:0000055!1.34e-08!50;CL:0000393!3.12e-07!39;CL:0000211!3.12e-07!39;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.99e-11,44;CL:0000133,6.99e-11,44;CL:0002319,1.42e-10,43;CL:0000540,7.77e-09,33;CL:0000047,7.77e-09,33;CL:0000031,7.77e-09,33;CL:0000404,7.77e-09,33;CL:0000393,3.12e-07,39;CL:0000211,3.12e-07,39;CL:0000791,6.60e-07,9;CL:0000789,6.60e-07,9;CL:0002420,6.60e-07,9;CL:0002419,6.60e-07,9;CL:0000790,6.60e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.46e-22!75;UBERON:0001016!5.46e-22!75;UBERON:0001017!3.49e-21!73;UBERON:0005743!3.49e-21!73;UBERON:0007811!6.08e-18!86;UBERON:0000153!7.98e-16!94;UBERON:0001049!1.93e-15!52;UBERON:0005068!1.93e-15!52;UBERON:0006241!1.93e-15!52;UBERON:0007135!1.93e-15!52;UBERON:0000955!8.53e-15!50;UBERON:0006238!8.53e-15!50;UBERON:0002020!2.86e-14!34;UBERON:0002616!3.27e-14!49;UBERON:0002791!1.80e-13!29;UBERON:0003528!1.80e-13!29;UBERON:0001893!1.80e-13!29;UBERON:0003080!1.97e-13!40;UBERON:0002780!3.44e-13!39;UBERON:0001890!3.44e-13!39;UBERON:0006240!3.44e-13!39;UBERON:0000956!1.34e-11!21;UBERON:0001869!1.34e-11!21;UBERON:0000203!1.34e-11!21;UBERON:0004121!2.86e-10!102;UBERON:0000924!2.86e-10!102;UBERON:0006601!2.86e-10!102;UBERON:0002619!1.11e-09!17;UBERON:0000033!1.58e-09!63;UBERON:0002370!3.48e-09!23;UBERON:0000974!3.48e-09!23;UBERON:0004807!3.48e-09!23;UBERON:0005058!3.48e-09!23;UBERON:0003351!3.48e-09!23;UBERON:0009113!3.48e-09!23;UBERON:0003295!3.48e-09!23;UBERON:0009722!3.48e-09!23;UBERON:0005562!3.48e-09!23;UBERON:0007690!3.48e-09!23;UBERON:0002346!1.03e-08!71;UBERON:0003075!1.03e-08!71;UBERON:0007284!1.03e-08!71;UBERON:0003056!1.42e-08!49;UBERON:0000477!1.79e-08!154;UBERON:0003408!2.61e-08!24;UBERON:0006562!2.96e-08!24;UBERON:0001557!2.96e-08!24;UBERON:0001042!2.96e-08!24;UBERON:0008814!2.96e-08!24;UBERON:0009145!2.96e-08!24;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0004177!1.09e-07!29;UBERON:0000072!6.17e-07!27;UBERON:0000064!8.53e-07!99;UBERON:0000063!9.99e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.45e-22,75;UBERON:0001017,3.49e-21,73;UBERON:0001049,1.92e-15,52;UBERON:0005068,1.92e-15,52;UBERON:0006241,1.92e-15,52;UBERON:0007135,1.92e-15,52;UBERON:0000073,2.86e-15,54;UBERON:0000955,9.59e-15,47;UBERON:0006238,9.59e-15,47;UBERON:0002020,2.85e-14,34;UBERON:0002616,3.71e-14,46;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0003080,1.97e-13,40;UBERON:0002780,3.44e-13,39;UBERON:0001890,3.44e-13,39;UBERON:0006240,3.44e-13,39;UBERON:0004121,2.00e-12,95;UBERON:0000924,2.00e-12,95;UBERON:0006601,2.00e-12,95;UBERON:0000956,1.34e-11,21;UBERON:0001869,1.34e-11,21;UBERON:0000203,1.34e-11,21;UBERON:0002346,3.33e-11,64;UBERON:0003075,3.33e-11,64;UBERON:0007284,3.33e-11,64;UBERON:0002619,1.11e-09,17;UBERON:0002370,3.48e-09,23;UBERON:0000974,3.48e-09,23;UBERON:0004807,3.48e-09,23;UBERON:0005058,3.48e-09,23;UBERON:0003351,3.48e-09,23;UBERON:0009113,3.48e-09,23;UBERON:0003295,3.48e-09,23;UBERON:0009722,3.48e-09,23;UBERON:0005562,3.48e-09,23;UBERON:0007690,3.48e-09,23;UBERON:0010371,6.11e-09,73;UBERON:0003056,1.42e-08,49;UBERON:0003408,2.61e-08,24;UBERON:0006562,2.96e-08,24;UBERON:0001557,2.96e-08,24;UBERON:0001042,2.96e-08,24;UBERON:0008814,2.96e-08,24;UBERON:0009145,2.96e-08,24;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10;UBERON:0004177,1.09e-07,29;UBERON:0005057,1.09e-07,29;UBERON:0000072,6.17e-07,27 | |||
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| |||
|short_description=p1@Cdk17 | |||
}} |
Revision as of 00:56, 5 August 2015
Short description: | p1@Cdk17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdk17_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000069965, NM_146239, uc007guk.2, uc007gul.2_5end |
EntrezGene: | 237459 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.99e-11 | 44 |
neurectodermal cell | 6.99e-11 | 44 |
neural cell | 1.42e-10 | 43 |
neuron | 7.77e-09 | 33 |
neuronal stem cell | 7.77e-09 | 33 |
neuroblast | 7.77e-09 | 33 |
electrically signaling cell | 7.77e-09 | 33 |
electrically responsive cell | 3.12e-07 | 39 |
electrically active cell | 3.12e-07 | 39 |
mature alpha-beta T cell | 6.60e-07 | 9 |
alpha-beta T cell | 6.60e-07 | 9 |
immature T cell | 6.60e-07 | 9 |
mature T cell | 6.60e-07 | 9 |
immature alpha-beta T cell | 6.60e-07 | 9 |