FFCP PHASE1:Mm9::chr15:88890142..88890190,+: Difference between revisions
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{{FFCP|EntrezGene=406218|HGNC=|MCL_coexpression_id=1|UniProt=Q6IMP4|association_with_transcript=0bp_to_ENSMUST00000096304,ENSMUST00000161372,ENSMUST00000162424,NM_001002005,uc007xfa.2,uc011zxq.1_5end|description=CAGE_peak_1_at_Panx2_5end|id=chr15:88890142..88890190,+|ontology_enrichment_celltype=CL:0000117!4.10e-14!23;CL:0000337!4.10e-14!23;CL:0000540!8.80e-13!33;CL:0000047!8.80e-13!33;CL:0000031!8.80e-13!33;CL:0000404!8.80e-13!33;CL:0000221!3.14e-12!44;CL:0000133!3.14e-12!44;CL:0002319!8.25e-12!43;CL:0000393!3.36e-09!39;CL:0000211!3.36e-09!39;CL:0000055!2.01e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.74e-21,23;CL:0000337,2.74e-21,23;CL:0000540,1.71e-13,33;CL:0000047,1.71e-13,33;CL:0000031,1.71e-13,33;CL:0000404,1.71e-13,33;CL:0000221,6.40e-11,44;CL:0000133,6.40e-11,44;CL:0002319,2.30e-10,43;CL:0000393,3.22e-10,39;CL:0000211,3.22e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.48e-32!73;UBERON:0005743!1.48e-32!73;UBERON:0000073!3.56e-32!75;UBERON:0001016!3.56e-32!75;UBERON:0002346!1.94e-29!71;UBERON:0003075!1.94e-29!71;UBERON:0007284!1.94e-29!71;UBERON:0000033!1.02e-28!63;UBERON:0004121!1.03e-28!102;UBERON:0000924!1.03e-28!102;UBERON:0006601!1.03e-28!102;UBERON:0001049!1.09e-27!52;UBERON:0005068!1.09e-27!52;UBERON:0006241!1.09e-27!52;UBERON:0007135!1.09e-27!52;UBERON:0000955!8.03e-27!50;UBERON:0006238!8.03e-27!50;UBERON:0002616!3.81e-26!49;UBERON:0003056!3.19e-24!49;UBERON:0003080!3.29e-22!40;UBERON:0002780!1.97e-21!39;UBERON:0001890!1.97e-21!39;UBERON:0006240!1.97e-21!39;UBERON:0002020!1.51e-19!34;UBERON:0002791!1.30e-16!29;UBERON:0003528!1.30e-16!29;UBERON:0001893!1.30e-16!29;UBERON:0007811!4.42e-13!86;UBERON:0000153!1.99e-12!94;UBERON:0000956!1.03e-11!21;UBERON:0001869!1.03e-11!21;UBERON:0000203!1.03e-11!21;UBERON:0000025!1.95e-11!114;UBERON:0004111!1.14e-10!122;UBERON:0002619!1.23e-09!17;UBERON:0002021!7.09e-08!10;UBERON:0000411!7.09e-08!10;UBERON:0001950!7.09e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.52e-44,54;UBERON:0001049,3.27e-41,52;UBERON:0005068,3.27e-41,52;UBERON:0006241,3.27e-41,52;UBERON:0007135,3.27e-41,52;UBERON:0001017,1.37e-40,73;UBERON:0002346,2.19e-40,64;UBERON:0003075,2.19e-40,64;UBERON:0007284,2.19e-40,64;UBERON:0001016,5.68e-39,75;UBERON:0000955,5.99e-36,47;UBERON:0006238,5.99e-36,47;UBERON:0002616,6.52e-35,46;UBERON:0004121,6.58e-35,95;UBERON:0000924,6.58e-35,95;UBERON:0006601,6.58e-35,95;UBERON:0010371,1.40e-34,73;UBERON:0010314,3.02e-34,92;UBERON:0003056,1.01e-32,49;UBERON:0003080,1.59e-32,40;UBERON:0002780,2.62e-31,39;UBERON:0001890,2.62e-31,39;UBERON:0006240,2.62e-31,39;UBERON:0002020,2.54e-28,34;UBERON:0003528,1.02e-23,29;UBERON:0002791,1.02e-23,29;UBERON:0001893,1.02e-23,29;UBERON:0000956,4.37e-16,21;UBERON:0001869,4.37e-16,21;UBERON:0000203,4.37e-16,21;UBERON:0000025,7.25e-16,114;UBERON:0004111,1.79e-14,122;UBERON:0002619,7.60e-13,17;UBERON:0002021,1.74e-11,10;UBERON:0000411,1.74e-11,10;UBERON:0001950,1.74e-11,10;UBERON:0002420,8.26e-09,8;UBERON:0007245,8.26e-09,8;UBERON:0010009,8.26e-09,8;UBERON:0010011,8.26e-09,8;UBERON:0000454,8.26e-09,8;UBERON:0003076,1.06e-08,12;UBERON:0003057,1.06e-08,12;UBERON:0000483,2.10e-08,174;UBERON:0001894,2.92e-08,10;UBERON:0006222,2.92e-08,10;UBERON:0000119,4.13e-08,176;UBERON:0002240,6.73e-07,6;UBERON:0005174,6.73e-07,6;UBERON:0001137,6.73e-07,6|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86798702042381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,6.27181028664753,7.40587370980846,4.43681982454325,0,0,0,0,0,0.599200221036809,1.92109152660777,3.42175720617976,4.72520784160917,2.52389953621658,12.8542942981712,11.9269012113871,3.1847607795888,3.06705507258356,1.83843757322004,48.450987639731,49.0319378247121,46.8499926431543,7.78129097608144,6.22115976496386,5.73004707612436,48.2986588272389,12.9435400307286,24.90611438762,10.9012576625257,8.39992916714707,5.21918448310842,0.302904773332736,0.226714680320357,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,2.25349471642689,0,0,0,0,0,0,1.1418387971906,0,1.03909497345377,0.867426633830679,0.913396434936424,0,0.150722640552623,0.470354828542819,0.251333182659351,0,0,0,0.323533699894818,0,0,0,16.6885054296582,20.7352239745321,0,0,0,0,36.6987066541816,26.992535566299,6.15706325353036,30.5930803538407,21.4800984157478,32.6227229958509,20.6046404096052,0.101839363850316,0.373220911830279,0,1.89397670297827,1.04096354370163,0.919608417733892,1.0803727788321,0.30140963567143,1.15662048557257,0.512454881139399,1.21812241927647,3.62184719034622,0,0.567318240503458,0.351902248327898,1.53437012699302,0.556094498451196,0.348252166522167,0,0,0,0,0,2.27838349789052,1.40715635988658,2.34080679899319,3.78791576936336,0.787056926989615,1.54267112887378,1.86027155800326,0.804820204198858,1.16765342367169,1.15191894939436,0.656669856316381,0.648550476366846,0.292399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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:406218 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6IMP4 | |||
|association_with_transcript=0bp_to_ENSMUST00000096304,ENSMUST00000161372,ENSMUST00000162424,NM_001002005,uc007xfa.2,uc011zxq.1_5end | |||
|cluster_id=chr15:88890142..88890190,+ | |||
|description=CAGE_peak_1_at_Panx2_5end | |||
|id=chr15:88890142..88890190,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.10e-14!23;CL:0000337!4.10e-14!23;CL:0000540!8.80e-13!33;CL:0000047!8.80e-13!33;CL:0000031!8.80e-13!33;CL:0000404!8.80e-13!33;CL:0000221!3.14e-12!44;CL:0000133!3.14e-12!44;CL:0002319!8.25e-12!43;CL:0000393!3.36e-09!39;CL:0000211!3.36e-09!39;CL:0000055!2.01e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.74e-21,23;CL:0000337,2.74e-21,23;CL:0000540,1.71e-13,33;CL:0000047,1.71e-13,33;CL:0000031,1.71e-13,33;CL:0000404,1.71e-13,33;CL:0000221,6.40e-11,44;CL:0000133,6.40e-11,44;CL:0002319,2.30e-10,43;CL:0000393,3.22e-10,39;CL:0000211,3.22e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.48e-32!73;UBERON:0005743!1.48e-32!73;UBERON:0000073!3.56e-32!75;UBERON:0001016!3.56e-32!75;UBERON:0002346!1.94e-29!71;UBERON:0003075!1.94e-29!71;UBERON:0007284!1.94e-29!71;UBERON:0000033!1.02e-28!63;UBERON:0004121!1.03e-28!102;UBERON:0000924!1.03e-28!102;UBERON:0006601!1.03e-28!102;UBERON:0001049!1.09e-27!52;UBERON:0005068!1.09e-27!52;UBERON:0006241!1.09e-27!52;UBERON:0007135!1.09e-27!52;UBERON:0000955!8.03e-27!50;UBERON:0006238!8.03e-27!50;UBERON:0002616!3.81e-26!49;UBERON:0003056!3.19e-24!49;UBERON:0003080!3.29e-22!40;UBERON:0002780!1.97e-21!39;UBERON:0001890!1.97e-21!39;UBERON:0006240!1.97e-21!39;UBERON:0002020!1.51e-19!34;UBERON:0002791!1.30e-16!29;UBERON:0003528!1.30e-16!29;UBERON:0001893!1.30e-16!29;UBERON:0007811!4.42e-13!86;UBERON:0000153!1.99e-12!94;UBERON:0000956!1.03e-11!21;UBERON:0001869!1.03e-11!21;UBERON:0000203!1.03e-11!21;UBERON:0000025!1.95e-11!114;UBERON:0004111!1.14e-10!122;UBERON:0002619!1.23e-09!17;UBERON:0002021!7.09e-08!10;UBERON:0000411!7.09e-08!10;UBERON:0001950!7.09e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.52e-44,54;UBERON:0001049,3.27e-41,52;UBERON:0005068,3.27e-41,52;UBERON:0006241,3.27e-41,52;UBERON:0007135,3.27e-41,52;UBERON:0001017,1.37e-40,73;UBERON:0002346,2.19e-40,64;UBERON:0003075,2.19e-40,64;UBERON:0007284,2.19e-40,64;UBERON:0001016,5.68e-39,75;UBERON:0000955,5.99e-36,47;UBERON:0006238,5.99e-36,47;UBERON:0002616,6.52e-35,46;UBERON:0004121,6.58e-35,95;UBERON:0000924,6.58e-35,95;UBERON:0006601,6.58e-35,95;UBERON:0010371,1.40e-34,73;UBERON:0010314,3.02e-34,92;UBERON:0003056,1.01e-32,49;UBERON:0003080,1.59e-32,40;UBERON:0002780,2.62e-31,39;UBERON:0001890,2.62e-31,39;UBERON:0006240,2.62e-31,39;UBERON:0002020,2.54e-28,34;UBERON:0003528,1.02e-23,29;UBERON:0002791,1.02e-23,29;UBERON:0001893,1.02e-23,29;UBERON:0000956,4.37e-16,21;UBERON:0001869,4.37e-16,21;UBERON:0000203,4.37e-16,21;UBERON:0000025,7.25e-16,114;UBERON:0004111,1.79e-14,122;UBERON:0002619,7.60e-13,17;UBERON:0002021,1.74e-11,10;UBERON:0000411,1.74e-11,10;UBERON:0001950,1.74e-11,10;UBERON:0002420,8.26e-09,8;UBERON:0007245,8.26e-09,8;UBERON:0010009,8.26e-09,8;UBERON:0010011,8.26e-09,8;UBERON:0000454,8.26e-09,8;UBERON:0003076,1.06e-08,12;UBERON:0003057,1.06e-08,12;UBERON:0000483,2.10e-08,174;UBERON:0001894,2.92e-08,10;UBERON:0006222,2.92e-08,10;UBERON:0000119,4.13e-08,176;UBERON:0002240,6.73e-07,6;UBERON:0005174,6.73e-07,6;UBERON:0001137,6.73e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86798702042381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,6.27181028664753,7.40587370980846,4.43681982454325,0,0,0,0,0,0.599200221036809,1.92109152660777,3.42175720617976,4.72520784160917,2.52389953621658,12.8542942981712,11.9269012113871,3.1847607795888,3.06705507258356,1.83843757322004,48.450987639731,49.0319378247121,46.8499926431543,7.78129097608144,6.22115976496386,5.73004707612436,48.2986588272389,12.9435400307286,24.90611438762,10.9012576625257,8.39992916714707,5.21918448310842,0.302904773332736,0.226714680320357,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,2.25349471642689,0,0,0,0,0,0,1.1418387971906,0,1.03909497345377,0.867426633830679,0.913396434936424,0,0.150722640552623,0.470354828542819,0.251333182659351,0,0,0,0.323533699894818,0,0,0,16.6885054296582,20.7352239745321,0,0,0,0,36.6987066541816,26.992535566299,6.15706325353036,30.5930803538407,21.4800984157478,32.6227229958509,20.6046404096052,0.101839363850316,0.373220911830279,0,1.89397670297827,1.04096354370163,0.919608417733892,1.0803727788321,0.30140963567143,1.15662048557257,0.512454881139399,1.21812241927647,3.62184719034622,0,0.567318240503458,0.351902248327898,1.53437012699302,0.556094498451196,0.348252166522167,0,0,0,0,0,2.27838349789052,1.40715635988658,2.34080679899319,3.78791576936336,0.787056926989615,1.54267112887378,1.86027155800326,0.804820204198858,1.16765342367169,1.15191894939436,0.656669856316381,0.648550476366846,0.292399974850665,0.439100230582101,0.402619256281115,34.9081314616451,5.24813523134351,0,0.264450566663544,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,47.2018734564108,38.2110098290582,0,0,0.315508219416257,1.17131623288992,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,14.1381379225595,0,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,2.38307724027652,1.26042765821917,1.29358683782755,1.71469628025274,2.30542303734956,1.60531935841864,2.63278432963394,6.08929898229199,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,51.7336592609322,0,0,0,0,0,0,0.849892149969277,0.419854356970974,0.967399816630967,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0.621339313086926,1.12738587736838,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,0.506868376472335,0.234714477291508,0,0.314578033277133,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9785847603851,23.9369122983732,18.9055519435001,32.6521046453006,25.3480532315138,25.6833925112498,16.2005400055633,20.2644541450899,14.5005570874945,28.4768171463501,0.415149390336707,0.798049746802062,0.682934423016537,0.729320151204882,1.04806581313991,1.47074806760011,0.666740183404846,1.23621034343337,1.28367683836726,0.505394423527595,1.2673964994512,0.943131706930381,1.03005658216871,0.960377286073039,1.09127391015665,1.42888107384922,0.463537303779422,1.54327376370964,0.824171801606613,1.03039244094078,1.02860775715625,0.532427418478012,1.1921809497366,1.45346416632329,0.564656282491984,1.01537529470012,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.830445126869219,1.37906275325789,0.409231043169689,0.929621047115796,0.964533054905707,2.24829520144151,0.935726433781634,0.859484216193193,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p1@Panx2 | |||
}} |
Revision as of 19:45, 5 August 2015
Short description: | p1@Panx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Panx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000096304, ENSMUST00000161372, ENSMUST00000162424, NM_001002005, uc007xfa.2, uc011zxq.1_5end |
EntrezGene: | 406218 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.74e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.74e-21 | 23 |
neuron | 1.71e-13 | 33 |
neuronal stem cell | 1.71e-13 | 33 |
neuroblast | 1.71e-13 | 33 |
electrically signaling cell | 1.71e-13 | 33 |
ectodermal cell | 6.40e-11 | 44 |
neurectodermal cell | 6.40e-11 | 44 |
neural cell | 2.30e-10 | 43 |
electrically responsive cell | 3.22e-10 | 39 |
electrically active cell | 3.22e-10 | 39 |