FFCP PHASE1:Hg19::chr16:1359138..1359193,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12485 | |||
|TSSclassifier=S | |||
|UniProt=P63279 | |||
|association_with_transcript=0bp_to_ENST00000325437,ENST00000355803,NM_194260,NM_194261,uc002clc.1_5end | |||
|description=CAGE_peak_2_at_UBE2I_5end | |||
|id=chr16:1359138..1359193,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.58e-31!679;CL:0000004!2.58e-31!679;CL:0000255!2.58e-31!679;CL:0000012!3.63e-31!682;CL:0000066!2.87e-26!254;CL:0002321!9.82e-21!248;CL:0000220!7.58e-20!246;CL:0000003!6.55e-17!722;CL:0000144!3.45e-16!625;CL:0000222!1.23e-15!119;CL:0002371!5.08e-12!591;CL:0000055!2.82e-11!180;CL:0000063!2.30e-10!578;CL:1000449!2.14e-09!16;CL:0002078!2.68e-09!44;CL:0000183!3.01e-09!59;CL:0000393!1.10e-08!60;CL:0000211!1.10e-08!60;CL:0000115!1.53e-08!35;CL:0000213!1.57e-08!57;CL:0000215!1.57e-08!57;CL:0002681!6.04e-08!13;CL:0002584!6.04e-08!13;CL:0002139!7.11e-08!24;CL:1000507!9.28e-08!12;CL:1000494!9.28e-08!12;CL:1000497!2.04e-07!18;CL:0002518!2.04e-07!18;CL:0000187!2.17e-07!54;CL:0000076!3.21e-07!62;CL:0000680!4.65e-07!57;CL:0000056!4.65e-07!57;CL:0000355!4.65e-07!57;CL:0000071!6.53e-07!18;CL:0002546!6.53e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.43e-09;15!CL:0002681;5.35e-08;12!CL:0002584;5.35e-08;12!CL:0002139;1.53e-07;24!CL:1000507;3.33e-07;10!CL:1000494;3.33e-07;10!CL:0000115;3.41e-07;36!CL:1000497;3.68e-07;17!CL:0002518;3.68e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.79e-26,253;CL:0002321,1.34e-21,250;CL:0000222,3.10e-16,121;CL:0002078,1.57e-09,45;CL:1000449,1.91e-09,15;CL:0000393,7.37e-09,61;CL:0000211,7.37e-09,61;CL:0000213,7.77e-09,58;CL:0000215,7.77e-09,58;CL:0000115,8.14e-09,36;CL:0002681,5.45e-08,12;CL:0002584,5.45e-08,12;CL:0002139,6.55e-08,24;CL:0000187,1.49e-07,55;CL:1000497,2.10e-07,17;CL:0002518,2.10e-07,17;CL:0000076,3.03e-07,63;CL:0000680,3.20e-07,58;CL:0000056,3.20e-07,58;CL:0000355,3.20e-07,58;CL:1000507,3.34e-07,10;CL:1000494,3.34e-07,10;CL:0000071,6.09e-07,18;CL:0002546,6.09e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.49e-15!239;DOID:162!1.10e-14!235;DOID:0050687!3.69e-08!143;DOID:305!7.42e-08!106;DOID:0050686!8.97e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.93e-15,239;DOID:162,8.57e-15,235;DOID:0050687,3.18e-08,143;DOID:305,5.23e-08,106;DOID:0050686,7.71e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0003914!6.39e-11!118;UBERON:0004211!2.14e-09!16;UBERON:0001285!2.14e-09!16;UBERON:0007684!2.14e-09!16;UBERON:0003220!2.14e-09!16;UBERON:0004208!2.14e-09!16;UBERON:0003104!4.44e-09!238;UBERON:0009142!4.44e-09!238;UBERON:0002049!5.81e-09!79;UBERON:0007798!5.81e-09!79;UBERON:0005256!6.86e-09!143;UBERON:0000490!1.38e-08!138;UBERON:0001851!2.14e-08!16;UBERON:0002100!3.04e-08!216;UBERON:0006555!4.42e-08!17;UBERON:0005103!4.42e-08!17;UBERON:0000083!4.42e-08!17;UBERON:0009201!4.42e-08!17;UBERON:0004819!4.42e-08!17;UBERON:0006553!4.42e-08!17;UBERON:0003074!4.42e-08!17;UBERON:0003060!4.42e-08!17;UBERON:0001225!6.04e-08!13;UBERON:0008987!6.04e-08!13;UBERON:0000055!7.00e-08!69;UBERON:0009773!9.28e-08!12;UBERON:0001231!9.28e-08!12;UBERON:0004810!9.28e-08!12;UBERON:0000353!2.49e-07!17;UBERON:0001986!6.53e-07!18;UBERON:0004638!6.53e-07!18;UBERON:0004852!6.53e-07!18;UBERON:0000080!7.65e-07!18;UBERON:0002120!7.65e-07!18;UBERON:0004875!7.65e-07!18;UBERON:0005721!7.65e-07!18;UBERON:0005754!7.65e-07!18;UBERON:0007297!7.65e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.43e-09;15!UBERON:0004819;2.43e-09;15!UBERON:0001285;2.43e-09;15!UBERON:0007684;2.43e-09;15!UBERON:0000353;1.28e-08;15!UBERON:0001851;2.97e-08;15!UBERON:0001225;5.35e-08;12!UBERON:0008987;5.35e-08;12!UBERON:0002113;2.40e-07;24!UBERON:0011143;2.40e-07;24!UBERON:0003914;3.01e-07;74!UBERON:0004211;3.33e-07;10!UBERON:0009773;3.33e-07;10!UBERON:0001231;3.33e-07;10!UBERON:0004810;3.33e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.60e-11,117;UBERON:0000490,1.40e-09,148;UBERON:0004211,1.91e-09,15;UBERON:0009773,1.91e-09,15;UBERON:0001231,1.91e-09,15;UBERON:0001285,1.91e-09,15;UBERON:0007684,1.91e-09,15;UBERON:0004208,1.91e-09,15;UBERON:0002049,2.10e-09,78;UBERON:0007798,2.10e-09,78;UBERON:0002100,2.64e-09,199;UBERON:0007503,1.06e-08,78;UBERON:0000353,1.72e-08,15;UBERON:0001851,2.08e-08,15;UBERON:0000055,2.59e-08,68;UBERON:0006555,4.43e-08,16;UBERON:0004819,4.43e-08,16;UBERON:0001225,5.45e-08,12;UBERON:0008987,5.45e-08,12;UBERON:0003104,7.62e-08,160;UBERON:0009142,7.62e-08,160;UBERON:0004810,3.34e-07,10;UBERON:0005256,5.81e-07,122;UBERON:0004638,6.09e-07,18;UBERON:0001986,6.09e-07,18;UBERON:0004852,6.09e-07,18;UBERON:0000487,9.36e-07,22 | |||
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| |||
|short_description=p2@UBE2I | |||
}} |
Revision as of 09:18, 11 September 2013
Short description: | p2@UBE2I |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_UBE2I_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325437, ENST00000355803, NM_194260, NM_194261, uc002clc.1_5end |
EntrezGene: | UBE2I |
HGNC: | 12485 |
UniProt: | P63279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.79e-26 | 253 |
embryonic cell | 1.34e-21 | 250 |
mesodermal cell | 3.10e-16 | 121 |
meso-epithelial cell | 1.57e-09 | 45 |
epithelial cell of nephron | 1.91e-09 | 15 |
electrically responsive cell | 7.37e-09 | 61 |
electrically active cell | 7.37e-09 | 61 |
lining cell | 7.77e-09 | 58 |
barrier cell | 7.77e-09 | 58 |
endothelial cell | 8.14e-09 | 36 |
kidney cortical cell | 5.45e-08 | 12 |
renal cortical epithelial cell | 5.45e-08 | 12 |
endothelial cell of vascular tree | 6.55e-08 | 24 |
muscle cell | 1.49e-07 | 55 |
kidney cell | 2.10e-07 | 17 |
kidney epithelial cell | 2.10e-07 | 17 |
squamous epithelial cell | 3.03e-07 | 63 |
muscle precursor cell | 3.20e-07 | 58 |
myoblast | 3.20e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-07 | 58 |
kidney tubule cell | 3.34e-07 | 10 |
nephron tubule epithelial cell | 3.34e-07 | 10 |
blood vessel endothelial cell | 6.09e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.09e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 8.60e-11 | 117 |
unilaminar epithelium | 1.40e-09 | 148 |
nephron epithelium | 1.91e-09 | 15 |
renal tubule | 1.91e-09 | 15 |
nephron tubule | 1.91e-09 | 15 |
nephron | 1.91e-09 | 15 |
uriniferous tubule | 1.91e-09 | 15 |
nephrogenic mesenchyme | 1.91e-09 | 15 |
vasculature | 2.10e-09 | 78 |
vascular system | 2.10e-09 | 78 |
trunk | 2.64e-09 | 199 |
epithelial vesicle | 1.06e-08 | 78 |
parenchyma | 1.72e-08 | 15 |
cortex | 2.08e-08 | 15 |
vessel | 2.59e-08 | 68 |
excretory tube | 4.43e-08 | 16 |
kidney epithelium | 4.43e-08 | 16 |
cortex of kidney | 5.45e-08 | 12 |
renal parenchyma | 5.45e-08 | 12 |
mesenchyme | 7.62e-08 | 160 |
entire embryonic mesenchyme | 7.62e-08 | 160 |
nephron tubule epithelium | 3.34e-07 | 10 |
trunk mesenchyme | 5.81e-07 | 122 |
blood vessel endothelium | 6.09e-07 | 18 |
endothelium | 6.09e-07 | 18 |
cardiovascular system endothelium | 6.09e-07 | 18 |
simple squamous epithelium | 9.36e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.93e-15 | 239 |
cancer | 8.57e-15 | 235 |
cell type cancer | 3.18e-08 | 143 |
carcinoma | 5.23e-08 | 106 |
organ system cancer | 7.71e-08 | 137 |
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