FFCP PHASE1:Hg19::chr17:76375222..76375241,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr17:76375222..76375241,- | |||
|id=chr17:76375222..76375241,- | |||
|ontology_enrichment_celltype=CL:0002057!1.56e-22!42;CL:0000860!5.93e-20!45;CL:0000766!2.71e-13!76;CL:0002139!8.90e-12!24;CL:0002194!5.80e-11!63;CL:0000576!5.80e-11!63;CL:0000040!5.80e-11!63;CL:0000559!5.80e-11!63;CL:0002009!6.06e-11!65;CL:0000557!8.29e-11!71;CL:0000839!1.86e-10!70;CL:0000071!3.91e-09!18;CL:0002546!3.91e-09!18;CL:0000115!1.78e-08!35;CL:1000413!9.92e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.67e-32;33!CL:0002057;8.67e-32;33!CL:0000473;1.22e-21;39!CL:0000234;1.22e-21;39!CL:0000576;2.97e-17;48!CL:0000766;1.00e-11;69!CL:0002139;4.42e-10;24!CL:0000071;2.85e-09;18!CL:0000115;3.04e-08;36!CL:0000569;7.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.72e-32,42;CL:0002057,2.72e-32,42;CL:0000473,7.30e-27,48;CL:0000234,7.30e-27,48;CL:0000766,1.59e-21,72;CL:0002194,2.40e-19,59;CL:0000576,2.40e-19,59;CL:0000040,2.40e-19,59;CL:0000559,2.40e-19,59;CL:0002009,2.19e-18,61;CL:0000839,1.76e-17,66;CL:0000557,4.54e-17,67;CL:0000763,1.26e-10,108;CL:0000049,1.26e-10,108;CL:0002139,5.56e-10,24;CL:0000115,1.76e-09,36;CL:0000071,3.05e-09,18;CL:0002546,3.05e-09,18;CL:0000738,1.23e-08,136;CL:0002087,7.43e-08,115;CL:0002078,1.30e-07,45;CL:0000134,5.28e-07,354;CL:0002320,6.87e-07,361;CL:0000569,7.40e-07,4;CL:0000011,7.40e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002057;5.01e-24;42!CL:0002546;2.85e-09;18!CL:0000011;7.14e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!7.41e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.21e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.75e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0003081!2.09e-13!216;UBERON:0000025!2.46e-13!194;UBERON:0007023!3.11e-11!115;UBERON:0002405!7.18e-11!115;UBERON:0001474!3.32e-10!86;UBERON:0002371!3.61e-10!80;UBERON:0002193!6.18e-10!112;UBERON:0004111!1.01e-09!241;UBERON:0001049!1.53e-09!57;UBERON:0005068!1.53e-09!57;UBERON:0006241!1.53e-09!57;UBERON:0007135!1.53e-09!57;UBERON:0001986!3.91e-09!18;UBERON:0004638!3.91e-09!18;UBERON:0004852!3.91e-09!18;UBERON:0000055!7.03e-09!69;UBERON:0004872!1.89e-08!84;UBERON:0001009!2.27e-08!113;UBERON:0002020!3.57e-08!34;UBERON:0003528!3.57e-08!34;UBERON:0004765!3.67e-08!101;UBERON:0001434!3.67e-08!101;UBERON:0002390!3.70e-08!102;UBERON:0003061!3.70e-08!102;UBERON:0000467!7.53e-08!625;UBERON:0002616!8.51e-08!59;UBERON:0004535!8.61e-08!110;UBERON:0001981!8.86e-08!60;UBERON:0007500!8.86e-08!60;UBERON:0004537!8.86e-08!60;UBERON:0006965!8.86e-08!60;UBERON:0000480!9.59e-08!626;UBERON:0002780!1.59e-07!41;UBERON:0001890!1.59e-07!41;UBERON:0006240!1.59e-07!41;UBERON:0000477!2.28e-07!286;UBERON:0000487!2.83e-07!22;UBERON:0003080!3.74e-07!42;UBERON:0002049!3.75e-07!79;UBERON:0007798!3.75e-07!79;UBERON:0003914!4.73e-07!118;UBERON:0001893!6.43e-07!34;UBERON:0000468!7.38e-07!659;UBERON:0001869!8.07e-07!32;UBERON:0006914!8.17e-07!25;UBERON:0003915!9.92e-07!9;UBERON:0004700!9.92e-07!9;UBERON:0001917!9.92e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.85e-09;18!UBERON:0001986;2.85e-09;18!UBERON:0004852;2.85e-09;18!UBERON:0006914;4.24e-07;25!UBERON:0000487;4.59e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.94e-16,76;UBERON:0001474,2.38e-15,82;UBERON:0003081,4.62e-14,203;UBERON:0002405,5.37e-14,93;UBERON:0004765,6.28e-14,90;UBERON:0001434,2.22e-12,100;UBERON:0002193,3.65e-12,108;UBERON:0002390,5.52e-12,98;UBERON:0003061,5.52e-12,98;UBERON:0004638,3.05e-09,18;UBERON:0001986,3.05e-09,18;UBERON:0004852,3.05e-09,18;UBERON:0000025,3.23e-08,192;UBERON:0001049,1.65e-07,56;UBERON:0005068,1.65e-07,56;UBERON:0006241,1.65e-07,56;UBERON:0007135,1.65e-07,56;UBERON:0000926,1.81e-07,315;UBERON:0004120,1.81e-07,315;UBERON:0006603,1.81e-07,315;UBERON:0006914,4.42e-07,25;UBERON:0000487,4.84e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.618831764800233,1.65698687863958,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.96682138424452,0.383829398097213,2.32224184974114,0,0,0,0,0,0,32.1317336948489,15.4419224552009,13.8886957258145,0,0,0,0.581592955118259,0,3.63876091781724,3.0215774797739,4.11167888021826,14.2464930611748,123.707728698525,66.8579444040953,183.746692623431,75.1545584005828,36.7926269642781,74.484567626888,3.01187743268168,1.91034305040492,4.49446968890169,105.905026760332,28.8836124368484,111.244659889033,9.89553900560148,11.369428484433,26.8521592835597,9.28669563611469,9.07816359505824,19.9303119678584,98.7407254459001,68.8357452314666,143.344637505377,6.65939452896706,8.83866326370155,15.1901945971625,0,0,0.209658645508376,0.44931452458598,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0.639312809217652,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0.596287222100115,1.72046919021225,0.694281003215189,7.34900324501212,4.61449379830897,5.77747888074142,1.46296476575767,1.03366703667732,0.35576626268671,0.33472061276467,0,18.2465305372443,0,1.83831540172934,0.81014194788176,0.446498641420399,1.12264686313085,1.0135033243499,15.3316637465883,3.79706263827252,2.5648244150257,3.9534125230819,0,0,0.496971951695318,0.633152558322899,19.5965587603564,1.14734648299525,0.709336764396714,0,1.06748995729705,0,0,0.269421344139376,0,0,0,0,0.936480230490962,0.570471821544449,0.896692083310806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0.300091096084402,0,0.772921620136887,0,0.506328996723799,0,0.504867548488229,0,0,2.84007674013291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64367928031979,5.77503585335668,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,2.95394953340702,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0,0.577465791044295,5.55582615091933,1.52203321787679,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,2.69526550203004,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,1.690605505112,0,0,0,0,0,1.85871391755592,0,0,0.65147236858747,1.06617584622764,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,1.28343036279748,0,0,0.773288812777695,0.335032530668698,1.91381625495949,6.74106321552464,0,3.72973962092432,0,0.500170521059677,0.542530047399471,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0.413536052245775,1.2942852049117,9.60548020230999,0,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0.887808626565635,1.56041596426237,0,2.44041794765914,0,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,2.55140557914773,1.29549549661284,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,9.12955805808856,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0.808729926293264,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.573645408816206,0.0982490410131212,0,0,4.64436797654861,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0.296964680832639,0,0.994147647766298,2.11004124615769,0.111308705022906,1.81284261649436,0,1.79323189425963,4.14425873296722,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,2.05013945663194,0,1.54810963903714,0.295547618953547,0.438770794307945,0,0,1.92375646259493,1.13942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,3.22251556105289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.176512253383001,0.225980740780532,0,0,0.189932387867636,0,0,8.5381197895741,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,3.60252173225874,2.46429682005587,0,0,0,0.837847203816763,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,2.45166131000836,0,0,0,0,0.77380195455795,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.293104467356165,0,2.97350799631566,5.02483886622222,0,0,0.747511887973863,1.57204305099666,0,0.496166021811951,0,0,0,23.3927655448874,40.6117628316774,26.9584107551846,28.1970462410432,0,0.886068179966986,0.976210119215705,2.50381861413,1.14681839138014,1.55300672151593,0.869349641179368,0,0,0,0,0,0,0,1.49254802886874,1.16856654923612,5.54805861502613,13.2582103692562,0.50313580350515,5.33886732957922,3.8902811627477,15.2743233000871,2.17612080815893,8.57559869939877,1.91156120596443,0.449803112163605,2.018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| |||
|short_description=p@chr17:76375222..76375241,- | |||
}} |
Revision as of 17:40, 20 January 2014
Short description: | p@chr17:76375222..76375241, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76375222..76375241, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.72e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.72e-32 | 42 |
defensive cell | 7.30e-27 | 48 |
phagocyte | 7.30e-27 | 48 |
myeloid leukocyte | 1.59e-21 | 72 |
monopoietic cell | 2.40e-19 | 59 |
monocyte | 2.40e-19 | 59 |
monoblast | 2.40e-19 | 59 |
promonocyte | 2.40e-19 | 59 |
macrophage dendritic cell progenitor | 2.19e-18 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-17 | 66 |
granulocyte monocyte progenitor cell | 4.54e-17 | 67 |
myeloid cell | 1.26e-10 | 108 |
common myeloid progenitor | 1.26e-10 | 108 |
endothelial cell of vascular tree | 5.56e-10 | 24 |
endothelial cell | 1.76e-09 | 36 |
blood vessel endothelial cell | 3.05e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.05e-09 | 18 |
leukocyte | 1.23e-08 | 136 |
nongranular leukocyte | 7.43e-08 | 115 |
meso-epithelial cell | 1.30e-07 | 45 |
mesenchymal cell | 5.28e-07 | 354 |
connective tissue cell | 6.87e-07 | 361 |
cardiac mesenchymal cell | 7.40e-07 | 4 |
migratory trunk neural crest cell | 7.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.94e-16 | 76 |
bone element | 2.38e-15 | 82 |
lateral plate mesoderm | 4.62e-14 | 203 |
immune system | 5.37e-14 | 93 |
skeletal element | 6.28e-14 | 90 |
skeletal system | 2.22e-12 | 100 |
hemolymphoid system | 3.65e-12 | 108 |
hematopoietic system | 5.52e-12 | 98 |
blood island | 5.52e-12 | 98 |
blood vessel endothelium | 3.05e-09 | 18 |
endothelium | 3.05e-09 | 18 |
cardiovascular system endothelium | 3.05e-09 | 18 |
tube | 3.23e-08 | 192 |
neural tube | 1.65e-07 | 56 |
neural rod | 1.65e-07 | 56 |
future spinal cord | 1.65e-07 | 56 |
neural keel | 1.65e-07 | 56 |
mesoderm | 1.81e-07 | 315 |
mesoderm-derived structure | 1.81e-07 | 315 |
presumptive mesoderm | 1.81e-07 | 315 |
squamous epithelium | 4.42e-07 | 25 |
simple squamous epithelium | 4.84e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.75e-11 | 14 |