FFCP PHASE1:Hg19::chr2:167041511..167041522,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_BC029452_5end | |||
|description=CAGE_peak_2_at_BC029452_5end | |||
|id=chr2:167041511..167041522,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.08e-29!43;CL:0002368!7.62e-23!13;CL:0000223!3.89e-22!59;CL:0000066!1.08e-20!254;CL:0000244!4.06e-13!4;CL:0000731!4.06e-13!4;CL:0002251!7.62e-13!21;CL:0002202!3.47e-12!9;CL:0002632!3.47e-12!9;CL:0000068!8.55e-11!3;CL:0000069!8.55e-11!3;CL:0000307!8.55e-11!3;CL:0000377!8.55e-11!3;CL:0002159!1.41e-10!13;CL:0002621!2.01e-10!3;CL:0000076!6.64e-10!62;CL:0002328!1.34e-09!3;CL:0000220!2.36e-08!246;CL:0002321!3.24e-08!248;CL:0000575!1.54e-07!2;CL:0002327!1.89e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.42e-27;13!CL:0000307;2.65e-23;3!CL:0002076;7.90e-23;42!CL:0002621;2.07e-22;3!CL:0000244;3.03e-17;4!CL:0000731;3.03e-17;4!CL:0000575;6.52e-16;2!CL:0002336;3.06e-09;1!CL:0002261;3.06e-09;1!CL:0002170;3.06e-09;1!CL:0002251;3.50e-09;20!CL:1001319;1.27e-08;1!CL:1000600;1.27e-08;1!CL:0002202;4.03e-08;9!CL:0002632;4.03e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.44e-27,42;CL:0002368,2.58e-27,13;CL:0000068,2.12e-23,3;CL:0000069,2.12e-23,3;CL:0000307,2.12e-23,3;CL:0000377,2.12e-23,3;CL:0002621,1.60e-22,3;CL:0000223,1.75e-22,58;CL:0000244,2.57e-17,4;CL:0000731,2.57e-17,4;CL:0000575,1.06e-15,2;CL:0000066,2.89e-14,253;CL:0002336,3.06e-09,1;CL:0002261,3.06e-09,1;CL:0002170,3.06e-09,1;CL:0002251,3.35e-09,20;CL:1001319,1.13e-08,1;CL:1000600,1.13e-08,1;CL:0002202,3.75e-08,9;CL:0002632,3.75e-08,9;CL:0002321,4.43e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;2.65e-23;3!CL:0000223;1.85e-14;58 | |||
|ontology_enrichment_disease=DOID:1749!4.67e-16!14 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.27e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!9.55e-17!72;UBERON:0004119!2.20e-16!169;UBERON:0000925!2.20e-16!169;UBERON:0006595!2.20e-16!169;UBERON:0000365!5.06e-16!5;UBERON:0005910!2.75e-13!6;UBERON:0000065!1.16e-12!53;UBERON:0000161!1.25e-11!35;UBERON:0004807!6.50e-11!28;UBERON:0005153!9.90e-11!37;UBERON:0001949!2.01e-10!3;UBERON:0003729!2.41e-10!5;UBERON:0000974!4.13e-10!10;UBERON:0007196!4.66e-10!14;UBERON:0001558!4.66e-10!14;UBERON:0005911!8.38e-10!82;UBERON:0005157!9.24e-10!51;UBERON:0004815!1.34e-09!3;UBERON:0002031!1.34e-09!3;UBERON:0001007!5.71e-09!155;UBERON:0001555!5.71e-09!155;UBERON:0007026!5.71e-09!155;UBERON:0005178!9.57e-09!34;UBERON:0002224!9.57e-09!34;UBERON:0006554!1.88e-08!44;UBERON:0005181!1.98e-08!35;UBERON:0000072!2.76e-08!46;UBERON:0001008!3.33e-08!45;UBERON:0003126!1.29e-07!7;UBERON:0001005!1.29e-07!7;UBERON:0001911!1.89e-07!4;UBERON:0005333!1.89e-07!4;UBERON:0008425!1.89e-07!4;UBERON:0005311!1.89e-07!4;UBERON:0003343!1.93e-07!4;UBERON:0004785!1.93e-07!4;UBERON:0002185!2.69e-07!4;UBERON:0001255!4.73e-07!2;UBERON:0001556!4.73e-07!2;UBERON:0000162!4.84e-07!14;UBERON:0001353!4.84e-07!14;UBERON:0000163!4.84e-07!14;UBERON:0006866!4.84e-07!14;UBERON:0000164!4.84e-07!14;UBERON:0000931!4.84e-07!14;UBERON:0003102!7.52e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.69e-29;12!UBERON:0000365;8.85e-24;5!UBERON:0001949;2.07e-22;3!UBERON:0005910;7.29e-20;6!UBERON:0003350;8.91e-15;8!UBERON:0003729;3.19e-14;13!UBERON:0000344;6.62e-13;20!UBERON:0003126;2.62e-10;7!UBERON:0001005;2.62e-10;7!UBERON:0003929;6.21e-10;7!UBERON:0005911;2.42e-09;36!UBERON:0001828;9.39e-09;8!UBERON:0004645;1.27e-08;1!UBERON:0001256;1.27e-08;1!UBERON:0001259;1.27e-08;1!UBERON:0000964;2.10e-08;4!UBERON:0010409;2.10e-08;4!UBERON:0001004;1.81e-07;65!UBERON:0000065;6.52e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.80e-24,5;UBERON:0001949,1.60e-22,3;UBERON:0005910,5.86e-20,6;UBERON:0003350,7.44e-15,8;UBERON:0003729,2.98e-14,13;UBERON:0000344,6.09e-13,20;UBERON:0001004,2.53e-12,74;UBERON:0004119,1.32e-11,160;UBERON:0000925,1.32e-11,160;UBERON:0006595,1.32e-11,160;UBERON:0003126,2.39e-10,7;UBERON:0001005,2.39e-10,7;UBERON:0001828,8.55e-09,8;UBERON:0004645,1.13e-08,1;UBERON:0001256,1.13e-08,1;UBERON:0001259,1.13e-08,1;UBERON:0000964,2.68e-08,4;UBERON:0010409,2.68e-08,4;UBERON:0004348,2.68e-08,4;UBERON:0005427,2.68e-08,4;UBERON:0000065,8.71e-08,54;UBERON:0000161,6.56e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,2.00832367658802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.63647672354501,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,0.100528972411631,8.79590229006031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.850650583454319,0.806026704325635,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,1.93370076765382,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.81813406897076,1.15314040419064,7.78437546216963,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69421915631434,1.34060455107157,3.26672954583968,0.0941438007767792,1.29151611801369,1.68471475667626,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,1.0319161948297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09819261579167,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15924980702256,0,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,0.744896571550295,0,0,0,0,0,0,0.502055437748735,0,1.38385556638657,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p2@BC029452 | |||
}} |
Revision as of 06:25, 21 January 2014
Short description: | p2@BC029452 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC029452_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_BC029452_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.44e-27 | 42 |
respiratory epithelial cell | 2.58e-27 | 13 |
duct epithelial cell | 2.12e-23 | 3 |
branched duct epithelial cell | 2.12e-23 | 3 |
tracheal epithelial cell | 2.12e-23 | 3 |
tracheoblast | 2.12e-23 | 3 |
gingival epithelial cell | 1.60e-22 | 3 |
endodermal cell | 1.75e-22 | 58 |
transitional epithelial cell | 2.57e-17 | 4 |
urothelial cell | 2.57e-17 | 4 |
corneal epithelial cell | 1.06e-15 | 2 |
epithelial cell | 2.89e-14 | 253 |
buccal mucosa cell | 3.06e-09 | 1 |
endothelial cell of viscerocranial mucosa | 3.06e-09 | 1 |
keratinized cell of the oral mucosa | 3.06e-09 | 1 |
epithelial cell of alimentary canal | 3.35e-09 | 20 |
bladder cell | 1.13e-08 | 1 |
lower urinary tract cell | 1.13e-08 | 1 |
epithelial cell of tracheobronchial tree | 3.75e-08 | 9 |
epithelial cell of lower respiratory tract | 3.75e-08 | 9 |
embryonic cell | 4.43e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.80e-24 | 5 |
gingival epithelium | 1.60e-22 | 3 |
transitional epithelium | 5.86e-20 | 6 |
epithelium of mucosa | 7.44e-15 | 8 |
mouth mucosa | 2.98e-14 | 13 |
mucosa | 6.09e-13 | 20 |
respiratory system | 2.53e-12 | 74 |
endoderm-derived structure | 1.32e-11 | 160 |
endoderm | 1.32e-11 | 160 |
presumptive endoderm | 1.32e-11 | 160 |
trachea | 2.39e-10 | 7 |
respiratory airway | 2.39e-10 | 7 |
gingiva | 8.55e-09 | 8 |
urinary bladder urothelium | 1.13e-08 | 1 |
wall of urinary bladder | 1.13e-08 | 1 |
mucosa of urinary bladder | 1.13e-08 | 1 |
cornea | 2.68e-08 | 4 |
eye surface | 2.68e-08 | 4 |
optic eminence | 2.68e-08 | 4 |
corneal primordium | 2.68e-08 | 4 |
respiratory tract | 8.71e-08 | 54 |
orifice | 6.56e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.22e-08 | 1 |