FFCP PHASE1:Hg19::chr19:54692317..54692331,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:54692317..54692331,+ | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_at_chr19:54692317..54692331,+ | |||
|id=chr19:54692317..54692331,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.81e-18!45;CL:0000766!1.11e-17!76;CL:0002057!1.16e-16!42;CL:0000839!1.23e-13!70;CL:0000557!3.00e-13!71;CL:0000763!1.27e-12!112;CL:0000049!1.27e-12!112;CL:0002194!2.51e-11!63;CL:0000576!2.51e-11!63;CL:0000040!2.51e-11!63;CL:0000559!2.51e-11!63;CL:0002009!1.29e-10!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.18e-43;33!CL:0002057;5.18e-43;33!CL:0000473;6.07e-30;39!CL:0000234;6.07e-30;39!CL:0000766;1.99e-21;69!CL:0000576;2.03e-19;48!CL:0000097;2.40e-19;5!CL:0000094;9.73e-18;8!CL:0000775;1.66e-17;3!CL:0000081;7.65e-13;11!CL:0000771;9.38e-13;2!CL:0000163;8.51e-11;9!CL:0000763;7.69e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.85e-47,72;CL:0000860,1.00e-34,42;CL:0002057,1.00e-34,42;CL:0000839,1.25e-32,66;CL:0000557,4.40e-32,67;CL:0000473,6.31e-30,48;CL:0000234,6.31e-30,48;CL:0000763,1.02e-29,108;CL:0000049,1.02e-29,108;CL:0002194,3.30e-23,59;CL:0000576,3.30e-23,59;CL:0000040,3.30e-23,59;CL:0000559,3.30e-23,59;CL:0000738,1.56e-22,136;CL:0002009,2.43e-22,61;CL:0000097,2.52e-19,5;CL:0002028,2.52e-19,5;CL:0002032,3.26e-18,161;CL:0000837,3.26e-18,161;CL:0000094,9.57e-18,8;CL:0000775,1.91e-17,3;CL:0000037,3.12e-17,168;CL:0000988,4.38e-16,177;CL:0002031,4.92e-16,120;CL:0000081,7.56e-13,11;CL:0000771,7.89e-13,2;CL:0000163,8.73e-11,9;CL:0002087,2.92e-10,115;CL:0000511,8.98e-07,1;CL:0002625,8.98e-07,1;CL:0000216,8.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;8.17e-27;42!CL:0000049;1.80e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.71e-16!102;UBERON:0003061!6.71e-16!102;UBERON:0002193!2.46e-13!112;UBERON:0002371!1.17e-11!80;UBERON:0001474!3.10e-11!86;UBERON:0003081!3.82e-08!216;UBERON:0004765!4.75e-08!101;UBERON:0001434!4.75e-08!101;UBERON:0002405!1.20e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.66e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.92e-30,98;UBERON:0003061,3.92e-30,98;UBERON:0002371,8.44e-28,76;UBERON:0002193,6.93e-27,108;UBERON:0001474,1.85e-25,82;UBERON:0004765,8.05e-23,90;UBERON:0002405,6.02e-22,93;UBERON:0001434,4.13e-20,100;UBERON:0003081,1.94e-14,203;UBERON:0002204,2.72e-10,167;UBERON:0000926,4.37e-09,315;UBERON:0004120,4.37e-09,315;UBERON:0006603,4.37e-09,315;UBERON:0000996,2.66e-07,1;UBERON:0000998,8.02e-07,1;UBERON:0006868,8.02e-07,1;UBERON:0001136,8.98e-07,1;UBERON:0001343,8.98e-07,1;UBERON:0004910,8.98e-07,1;UBERON:0005154,8.98e-07,1;UBERON:0005295,8.98e-07,1;UBERON:0004813,8.98e-07,1;UBERON:0005297,8.98e-07,1;UBERON:0005294,8.98e-07,1;UBERON:0010141,8.98e-07,1;UBERON:0005891,8.98e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.726991193897824,0.377875943688809,0.727752183563449,2.78914844286822,1.6446715520873,3.71647645074124,4.60307827715441,1.5369642391746,3.78371567821736,3.44745680736619,5.16387746867061,6.77132432971709,0.941211697713023,0,0.674170453335254,0.306083892370903,0,0,0.659702600373432,0.598390972864896,1.27867425159808,0.870627715885752,1.13477044938228,1.24564449799115,6.53246529667532,3.65038042894141,5.2125322729228,1.21079900526674,1.10483290796269,0,0,0,0.209658645508376,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0,0,0,0,3.9534125230819,11.6334079244498,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,4.43396914106349,0.088048434013226,11.6103744702832,9.07955706526857,22.7236380167484,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,2.24702107184155,2.99161459204025,3.31532410748828,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.03041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.855877976067841,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.659006605437454,0.43050537267123,0,0.886860307073351,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0.822724546172388,2.59389324477087,1.08006287447623,1.58625035258854,0.106824071127473,0,0,0,0,0,0,0,0,0.635020748171649,0,0.561594356226918,0,0,0,0,0,0.201799707191048,0,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0.796991953004279,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,2.5926644736038,0,0,0.492555124496034,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0.463044948647668,0.244736704506468,0.179088841081487,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.315446980005013,0,0.705351887381368,0,0.256916900385838,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,0,0.3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| |||
|short_description=p@chr19:54692317..54692331,+ | |||
}} |
Latest revision as of 17:09, 27 July 2015
Short description: | p@chr19:54692317..54692331, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54692317..54692331, + |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.92e-30 | 98 |
blood island | 3.92e-30 | 98 |
bone marrow | 8.44e-28 | 76 |
hemolymphoid system | 6.93e-27 | 108 |
bone element | 1.85e-25 | 82 |
skeletal element | 8.05e-23 | 90 |
immune system | 6.02e-22 | 93 |
skeletal system | 4.13e-20 | 100 |
lateral plate mesoderm | 1.94e-14 | 203 |
musculoskeletal system | 2.72e-10 | 167 |
mesoderm | 4.37e-09 | 315 |
mesoderm-derived structure | 4.37e-09 | 315 |
presumptive mesoderm | 4.37e-09 | 315 |
vagina | 2.66e-07 | 1 |
seminal vesicle | 8.02e-07 | 1 |
seminal fluid secreting gland | 8.02e-07 | 1 |
mesothelium | 8.98e-07 | 1 |
seminiferous tubule of testis | 8.98e-07 | 1 |
epithelium of male gonad | 8.98e-07 | 1 |
epithelial cord | 8.98e-07 | 1 |
sex cord | 8.98e-07 | 1 |
seminiferous tubule epithelium | 8.98e-07 | 1 |
testis sex cord | 8.98e-07 | 1 |
genital ridge | 8.98e-07 | 1 |
primitive sex cord of indifferent gonad | 8.98e-07 | 1 |
coelomic epithelium | 8.98e-07 | 1 |