FFCP PHASE1:Hg19::chr20:4071339..4071342,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4071339..4071342,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr20:4071339..4071342,- | |description=CAGE_peak_at_chr20:4071339..4071342,- | ||
|id=chr20:4071339..4071342,- | |id=chr20:4071339..4071342,- | ||
|ontology_enrichment_celltype=CL:0000048!5.88e-20!430;CL:0000723!2.73e-19!436;CL:0000034!2.99e-19!444;CL:0002057!1.33e-18!42;CL:0000860!7.59e-17!45;CL:0000134!9.13e-14!358;CL:0002320!4.59e-13!365;CL:0000219!3.95e-11!390;CL:0002194!1.17e-10!63;CL:0000576!1.17e-10!63;CL:0000040!1.17e-10!63;CL:0000559!1.17e-10!63;CL:0000766!3.43e-10!76;CL:0002009!4.07e-10!65;CL:0000144!4.03e-09!625;CL:0000839!6.53e-09!70;CL:0000557!1.08e-08!71;CL:0002371!1.16e-08!591;CL:0000569!5.35e-08!4;CL:0000011!5.35e-08!4;CL:0000012!9.07e-08!682;CL:0000548!2.35e-07!679;CL:0000004!2.35e-07!679;CL:0000255!2.35e-07!679 | |ontology_enrichment_celltype=CL:0000048!5.88e-20!430;CL:0000723!2.73e-19!436;CL:0000034!2.99e-19!444;CL:0002057!1.33e-18!42;CL:0000860!7.59e-17!45;CL:0000134!9.13e-14!358;CL:0002320!4.59e-13!365;CL:0000219!3.95e-11!390;CL:0002194!1.17e-10!63;CL:0000576!1.17e-10!63;CL:0000040!1.17e-10!63;CL:0000559!1.17e-10!63;CL:0000766!3.43e-10!76;CL:0002009!4.07e-10!65;CL:0000144!4.03e-09!625;CL:0000839!6.53e-09!70;CL:0000557!1.08e-08!71;CL:0002371!1.16e-08!591;CL:0000569!5.35e-08!4;CL:0000011!5.35e-08!4;CL:0000012!9.07e-08!682;CL:0000548!2.35e-07!679;CL:0000004!2.35e-07!679;CL:0000255!2.35e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-25;33!CL:0002057;1.92e-25;33!CL:0000473;2.98e-18;39!CL:0000234;2.98e-18;39!CL:0000569;9.55e-16;4!CL:0000576;2.05e-14;48!CL:0000134;9.66e-14;55!CL:0000048;1.06e-13;58!CL:0000723;4.62e-12;61!CL:0000034;3.35e-11;69!CL:0000766;4.31e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.64e-27,42;CL:0002057,8.64e-27,42;CL:0000473,7.24e-23,48;CL:0000234,7.24e-23,48;CL:0002194,2.19e-17,59;CL:0000576,2.19e-17,59;CL:0000040,2.19e-17,59;CL:0000559,2.19e-17,59;CL:0002009,1.11e-16,61;CL:0000569,8.69e-16,4;CL:0000011,8.69e-16,4;CL:0000839,4.20e-15,66;CL:0000557,8.15e-15,67;CL:0000766,1.69e-13,72;CL:0000134,2.28e-12,354;CL:0002320,6.16e-12,361;CL:0000034,9.78e-12,441;CL:0000048,1.40e-11,427;CL:0000723,2.82e-11,433;CL:0000219,2.03e-10,386;CL:0000763,1.19e-07,108;CL:0000049,1.19e-07,108;CL:0002087,6.00e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-19;42!CL:0000011;9.55e-16;4 | |||
|ontology_enrichment_disease=DOID:2394!1.07e-16!14;DOID:120!2.91e-08!27;DOID:193!1.85e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-30;14!DOID:120;9.61e-15;27!DOID:193;1.43e-13;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.24e-30,14;DOID:120,8.96e-15,27;DOID:193,1.34e-13,29 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.95e-13!375;UBERON:0002204!4.28e-13!167;UBERON:0002371!1.52e-09!80;UBERON:0002118!1.96e-09!5;UBERON:0004532!1.96e-09!5;UBERON:0001474!2.33e-08!86;UBERON:0004765!4.36e-08!101;UBERON:0001434!4.36e-08!101;UBERON:0000992!5.35e-08!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;7.69e-19;5!UBERON:0000992;1.50e-17;13!UBERON:0000991;2.30e-10;21!UBERON:0002119;2.72e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,5.90e-19,5;UBERON:0000992,1.24e-17,13;UBERON:0002371,1.24e-17,76;UBERON:0001474,5.60e-16,82;UBERON:0004765,4.06e-14,90;UBERON:0001434,1.36e-13,100;UBERON:0002405,1.67e-13,93;UBERON:0002390,1.46e-12,98;UBERON:0003061,1.46e-12,98;UBERON:0002384,3.58e-12,371;UBERON:0000926,1.88e-11,315;UBERON:0004120,1.88e-11,315;UBERON:0006603,1.88e-11,315;UBERON:0002193,6.00e-11,108;UBERON:0000991,2.06e-10,21;UBERON:0009196,2.06e-10,21;UBERON:0009117,2.06e-10,21;UBERON:0005564,2.06e-10,21;UBERON:0003081,4.67e-10,203;UBERON:0004176,7.01e-10,22;UBERON:0002204,1.89e-09,167;UBERON:0002119,2.61e-09,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,2.41077811209591,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,58.1695178958471,0.601633342410425,4.55722828503289,0,0,0,0,0.377875943688809,0.242584061187816,0,2.05583944010913,1.54853185447552,0,4.61089271752381,0.236482229888585,3.44745680736619,61.3210449404635,14.8969135253776,0,0.818718450173537,0,4.28517449319264,29.2045414639245,24.2948107803636,0,0.199463657621632,0,4.93355705668593,43.6886623012178,11.2108004819203,0,2.08593167368081,0,4.84319602106695,39.773984686657,17.4054313092486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,10.6496626966492,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31022952033047,0,0,0,0,0,0,0.404132016209064,0,0.454072282934794,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.717558542755448,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.985153801009636,0,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.164254312027618,1.03850885836724,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.964856007391714,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0,0,0,2.54562598340749,0,0.179872457583315,0,0,1.61745985258653,0,0,0,1.94970791705028,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0,0,2.32218398827431,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00355669041231,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,2.70582154946087,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,5.84283274618061,0.554805861502613,3.97746311077687,1.0062716070103,2.66943366478961,19.6802458821354,2.11723293268535,3.26418121223839,1.92211694986524,3.02663857611035,9.8956684675993,1.86315548251511,0,0.797525143673985,2.08698024724694,3.45592500693602,1.14241563650639,3.25496586563729,9.09243296012797,2.68526392606221,1.39210127963548,1.99047944349308,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0.982829546539238,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81534561833168,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,2.41077811209591,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,58.1695178958471,0.601633342410425,4.55722828503289,0,0,0,0,0.377875943688809,0.242584061187816,0,2.05583944010913,1.54853185447552,0,4.61089271752381,0.236482229888585,3.44745680736619,61.3210449404635,14.8969135253776,0,0.818718450173537,0,4.28517449319264,29.2045414639245,24.2948107803636,0,0.199463657621632,0,4.93355705668593,43.6886623012178,11.2108004819203,0,2.08593167368081,0,4.84319602106695,39.773984686657,17.4054313092486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,10.6496626966492,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31022952033047,0,0,0,0,0,0,0.404132016209064,0,0.454072282934794,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.717558542755448,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.985153801009636,0,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.164254312027618,1.03850885836724,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.964856007391714,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0,0,0,2.54562598340749,0,0.179872457583315,0,0,1.61745985258653,0,0,0,1.94970791705028,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0,0,2.32218398827431,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00355669041231,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,2.70582154946087,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,5.84283274618061,0.554805861502613,3.97746311077687,1.0062716070103,2.66943366478961,19.6802458821354,2.11723293268535,3.26418121223839,1.92211694986524,3.02663857611035,9.8956684675993,1.86315548251511,0,0.797525143673985,2.08698024724694,3.45592500693602,1.14241563650639,3.25496586563729,9.09243296012797,2.68526392606221,1.39210127963548,1.99047944349308,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0.982829546539238,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81534561833168,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:4071339..4071342,- | |short_description=p@chr20:4071339..4071342,- | ||
}} | }} |
Latest revision as of 14:04, 28 July 2015
Short description: | p@chr20:4071339..4071342, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4071339..4071342, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.64e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.64e-27 | 42 |
defensive cell | 7.24e-23 | 48 |
phagocyte | 7.24e-23 | 48 |
monopoietic cell | 2.19e-17 | 59 |
monocyte | 2.19e-17 | 59 |
monoblast | 2.19e-17 | 59 |
promonocyte | 2.19e-17 | 59 |
macrophage dendritic cell progenitor | 1.11e-16 | 61 |
cardiac mesenchymal cell | 8.69e-16 | 4 |
migratory trunk neural crest cell | 8.69e-16 | 4 |
myeloid lineage restricted progenitor cell | 4.20e-15 | 66 |
granulocyte monocyte progenitor cell | 8.15e-15 | 67 |
myeloid leukocyte | 1.69e-13 | 72 |
mesenchymal cell | 2.28e-12 | 354 |
connective tissue cell | 6.16e-12 | 361 |
stem cell | 9.78e-12 | 441 |
multi fate stem cell | 1.40e-11 | 427 |
somatic stem cell | 2.82e-11 | 433 |
motile cell | 2.03e-10 | 386 |
myeloid cell | 1.19e-07 | 108 |
common myeloid progenitor | 1.19e-07 | 108 |
nongranular leukocyte | 6.00e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
right ovary | 5.90e-19 | 5 |
female gonad | 1.24e-17 | 13 |
bone marrow | 1.24e-17 | 76 |
bone element | 5.60e-16 | 82 |
skeletal element | 4.06e-14 | 90 |
skeletal system | 1.36e-13 | 100 |
immune system | 1.67e-13 | 93 |
hematopoietic system | 1.46e-12 | 98 |
blood island | 1.46e-12 | 98 |
connective tissue | 3.58e-12 | 371 |
mesoderm | 1.88e-11 | 315 |
mesoderm-derived structure | 1.88e-11 | 315 |
presumptive mesoderm | 1.88e-11 | 315 |
hemolymphoid system | 6.00e-11 | 108 |
gonad | 2.06e-10 | 21 |
indifferent external genitalia | 2.06e-10 | 21 |
indifferent gonad | 2.06e-10 | 21 |
gonad primordium | 2.06e-10 | 21 |
lateral plate mesoderm | 4.67e-10 | 203 |
external genitalia | 7.01e-10 | 22 |
musculoskeletal system | 1.89e-09 | 167 |
left ovary | 2.61e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.24e-30 | 14 |
female reproductive organ cancer | 8.96e-15 | 27 |
reproductive organ cancer | 1.34e-13 | 29 |