FFCP PHASE1:Hg19::chr9:72117939..72117954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:72117939..72117954,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr9:72117939..72117954,- | |description=CAGE_peak_at_chr9:72117939..72117954,- | ||
|id=chr9:72117939..72117954,- | |id=chr9:72117939..72117954,- | ||
|ontology_enrichment_celltype=CL:0000071!1.44e-58!18;CL:0002546!1.44e-58!18;CL:0002139!2.54e-50!24;CL:0000115!8.53e-39!35;CL:1000413!7.35e-35!9;CL:0002078!2.99e-30!44;CL:0000213!1.14e-22!57;CL:0000215!1.14e-22!57;CL:0002618!2.97e-20!3;CL:0002544!5.60e-18!6;CL:0002543!1.80e-17!6;CL:0000076!3.14e-15!62;CL:0000222!1.00e-10!119;CL:0002144!8.91e-10!3;CL:0002127!2.70e-08!1;CL:0000914!2.70e-08!1;CL:0000911!2.70e-08!1;CL:0000814!2.70e-08!1;CL:0002042!2.70e-08!1;CL:0002039!2.70e-08!1;CL:0002040!2.70e-08!1;CL:0002041!2.70e-08!1;CL:1001319!1.87e-07!1;CL:1000600!1.87e-07!1 | |ontology_enrichment_celltype=CL:0000071!1.44e-58!18;CL:0002546!1.44e-58!18;CL:0002139!2.54e-50!24;CL:0000115!8.53e-39!35;CL:1000413!7.35e-35!9;CL:0002078!2.99e-30!44;CL:0000213!1.14e-22!57;CL:0000215!1.14e-22!57;CL:0002618!2.97e-20!3;CL:0002544!5.60e-18!6;CL:0002543!1.80e-17!6;CL:0000076!3.14e-15!62;CL:0000222!1.00e-10!119;CL:0002144!8.91e-10!3;CL:0002127!2.70e-08!1;CL:0000914!2.70e-08!1;CL:0000911!2.70e-08!1;CL:0000814!2.70e-08!1;CL:0002042!2.70e-08!1;CL:0002039!2.70e-08!1;CL:0002040!2.70e-08!1;CL:0002041!2.70e-08!1;CL:1001319!1.87e-07!1;CL:1000600!1.87e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.23e-66;1!CL:0000911;1.23e-66;1!CL:0000814;1.23e-66;1!CL:0002545;5.96e-34;2!CL:0002544;2.59e-12;6!CL:0000084;1.06e-11;25!CL:1000413;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.23e-66,1;CL:0000914,1.23e-66,1;CL:0000911,1.23e-66,1;CL:0000814,1.23e-66,1;CL:0002042,1.23e-66,1;CL:0002039,1.23e-66,1;CL:0002040,1.23e-66,1;CL:0002041,1.23e-66,1;CL:0000893,3.61e-34,2;CL:0002489,3.61e-34,2;CL:0000809,3.61e-34,2;CL:0000808,3.61e-34,2;CL:0000894,3.61e-34,2;CL:0000806,3.61e-34,2;CL:0000807,3.61e-34,2;CL:0000805,3.61e-34,2;CL:0002425,3.61e-34,2;CL:0002545,5.04e-34,2;CL:0002544,2.45e-12,6;CL:0000084,1.09e-11,25;CL:0000827,1.09e-11,25;CL:1000413,1.12e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002425;3.61e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.34e-08;10!DOID:2531;4.37e-07;51!DOID:0060083;4.37e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.56e-08,10;DOID:1240,6.83e-08,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0005800;5.96e-34;2!UBERON:0001515;5.96e-34;2!UBERON:0003915;1.16e-08;9!UBERON:0004700;1.16e-08;9!UBERON:0001917;1.16e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,5.04e-34,2;UBERON:0001515,5.04e-34,2;UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0003915,1.12e-08,9;UBERON:0004700,1.12e-08,9;UBERON:0001917,1.12e-08,9;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p@chr9:72117939..72117954,- | |short_description=p@chr9:72117939..72117954,- | ||
}} | }} |
Latest revision as of 02:26, 1 August 2015
Short description: | p@chr9:72117939..72117954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:72117939..72117954, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.23e-66 | 1 |
immature NK T cell | 1.23e-66 | 1 |
effector T cell | 1.23e-66 | 1 |
mature NK T cell | 1.23e-66 | 1 |
immature NK T cell stage IV | 1.23e-66 | 1 |
immature NK T cell stage I | 1.23e-66 | 1 |
immature NK T cell stage II | 1.23e-66 | 1 |
immature NK T cell stage III | 1.23e-66 | 1 |
thymocyte | 3.61e-34 | 2 |
double negative thymocyte | 3.61e-34 | 2 |
double-positive, alpha-beta thymocyte | 3.61e-34 | 2 |
DN4 thymocyte | 3.61e-34 | 2 |
DN1 thymic pro-T cell | 3.61e-34 | 2 |
DN2 thymocyte | 3.61e-34 | 2 |
DN3 thymocyte | 3.61e-34 | 2 |
immature single positive thymocyte | 3.61e-34 | 2 |
early T lineage precursor | 3.61e-34 | 2 |
thoracic aorta endothelial cell | 5.04e-34 | 2 |
aortic endothelial cell | 2.45e-12 | 6 |
T cell | 1.09e-11 | 25 |
pro-T cell | 1.09e-11 | 25 |
endothelial cell of artery | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 5.04e-34 | 2 |
thoracic aorta | 5.04e-34 | 2 |
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
endothelial tube | 1.12e-08 | 9 |
arterial system endothelium | 1.12e-08 | 9 |
endothelium of artery | 1.12e-08 | 9 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |