FFCP PHASE1:Hg19::chr18:13612559..13612571,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000988!1.02e-28!182;CL:0000542!2.51e-28!53;CL:0000051!2.51e-28!53;CL:0000037!3.28e-28!172;CL:0000566!3.28e-28!172;CL:0000838!3.12e-27!52;CL:0000738!6.05e-27!140;CL:0002032!1.32e-22!165;CL:0000837!1.32e-22!165;CL:0002087!2.03e-21!119;CL:0002031!6.73e-19!124;CL:0000945!1.12e-16!24;CL:0000826!1.12e-16!24;CL:0000236!1.10e-12!14;CL:0000084!1.95e-09!25;CL:0000827!1.95e-09!25;CL:0000080!9.84e-09!6;CL:0000624!1.76e-08!6;CL:0000451!2.95e-07!10 | |ontology_enrichment_celltype=CL:0000988!1.02e-28!182;CL:0000542!2.51e-28!53;CL:0000051!2.51e-28!53;CL:0000037!3.28e-28!172;CL:0000566!3.28e-28!172;CL:0000838!3.12e-27!52;CL:0000738!6.05e-27!140;CL:0002032!1.32e-22!165;CL:0000837!1.32e-22!165;CL:0002087!2.03e-21!119;CL:0002031!6.73e-19!124;CL:0000945!1.12e-16!24;CL:0000826!1.12e-16!24;CL:0000236!1.10e-12!14;CL:0000084!1.95e-09!25;CL:0000827!1.95e-09!25;CL:0000080!9.84e-09!6;CL:0000624!1.76e-08!6;CL:0000451!2.95e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.89e-17;53!CL:0000624;2.25e-13;6!CL:0000945;2.80e-12;24!CL:0000784;4.29e-12;3!CL:0000084;2.13e-11;25!CL:0000767;1.27e-10;3!CL:0000898;1.80e-10;3!CL:0000236;5.98e-09;13!CL:0000451;4.60e-08;10!CL:0002087;6.34e-08;104!CL:0001014;7.46e-08;2!CL:0001016;7.46e-08;2!CL:0000815;1.22e-07;2!CL:0000792;1.22e-07;2!CL:0002677;1.22e-07;2 | |ontology_enrichment_celltype_v019=CL:0000542;2.89e-17;53!CL:0000624;2.25e-13;6!CL:0000945;2.80e-12;24!CL:0000784;4.29e-12;3!CL:0000084;2.13e-11;25!CL:0000767;1.27e-10;3!CL:0000898;1.80e-10;3!CL:0000236;5.98e-09;13!CL:0000451;4.60e-08;10!CL:0002087;6.34e-08;104!CL:0001014;7.46e-08;2!CL:0001016;7.46e-08;2!CL:0000815;1.22e-07;2!CL:0000792;1.22e-07;2!CL:0002677;1.22e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.49e-28,177;CL:0000037,4.82e-25,168;CL:0000542,8.17e-25,53;CL:0000051,8.17e-25,53;CL:0000738,2.23e-24,136;CL:0000838,5.57e-23,52;CL:0002032,5.55e-19,161;CL:0000837,5.55e-19,161;CL:0002087,1.50e-16,115;CL:0002031,1.07e-15,120;CL:0000624,2.92e-13,6;CL:0000945,3.71e-12,24;CL:0000826,3.71e-12,24;CL:0000784,4.31e-12,3;CL:0000084,2.23e-11,25;CL:0000827,2.23e-11,25;CL:0000767,6.74e-11,3;CL:0000236,7.45e-11,14;CL:0000898,1.72e-10,3;CL:0000817,4.43e-10,3;CL:0000451,4.13e-08,10;CL:0001014,5.79e-08,2;CL:0001016,5.79e-08,2;CL:0000815,1.45e-07,2;CL:0000792,1.45e-07,2;CL:0002677,1.45e-07,2;CL:0000785,1.83e-07,2;CL:0000955,1.83e-07,2;CL:0000818,1.83e-07,2;CL:0000954,1.83e-07,2;CL:0000816,1.83e-07,2;CL:0000134,8.97e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;2.89e-17;53!CL:0000954;2.53e-07;2 | |ontology_enrichment_development_v019=CL:0000051;2.89e-17;53!CL:0000954;2.53e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.32e-12;10!DOID:2531;5.12e-07;51!DOID:0060083;5.12e-07;51 | |ontology_enrichment_disease_v019=DOID:0060058;8.32e-12;10!DOID:2531;5.12e-07;51!DOID:0060083;5.12e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.56e-12,10;DOID:2531,9.36e-10,51;DOID:0060083,9.36e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.93e-14!115;UBERON:0001049!2.70e-11!57;UBERON:0005068!2.70e-11!57;UBERON:0006241!2.70e-11!57;UBERON:0007135!2.70e-11!57;UBERON:0002616!8.47e-09!59;UBERON:0002780!7.47e-08!41;UBERON:0001890!7.47e-08!41;UBERON:0006240!7.47e-08!41;UBERON:0000955!8.88e-08!69;UBERON:0006238!8.88e-08!69;UBERON:0003080!1.52e-07!42;UBERON:0001893!3.66e-07!34;UBERON:0004177!4.31e-07!7;UBERON:0002020!6.59e-07!34;UBERON:0003528!6.59e-07!34;UBERON:0002298!8.14e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!5.93e-14!115;UBERON:0001049!2.70e-11!57;UBERON:0005068!2.70e-11!57;UBERON:0006241!2.70e-11!57;UBERON:0007135!2.70e-11!57;UBERON:0002616!8.47e-09!59;UBERON:0002780!7.47e-08!41;UBERON:0001890!7.47e-08!41;UBERON:0006240!7.47e-08!41;UBERON:0000955!8.88e-08!69;UBERON:0006238!8.88e-08!69;UBERON:0003080!1.52e-07!42;UBERON:0001893!3.66e-07!34;UBERON:0004177!4.31e-07!7;UBERON:0002020!6.59e-07!34;UBERON:0003528!6.59e-07!34;UBERON:0002298!8.14e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.68e-08;2!UBERON:0005058;2.68e-08;2!UBERON:0009113;2.68e-08;2!UBERON:0004177;5.23e-07;5!UBERON:0005057;5.23e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;2.68e-08;2!UBERON:0005058;2.68e-08;2!UBERON:0009113;2.68e-08;2!UBERON:0004177;5.23e-07;5!UBERON:0005057;5.23e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.72e-08,4;UBERON:0005058,1.72e-08,4;UBERON:0009113,1.72e-08,4;UBERON:0003295,1.72e-08,4;UBERON:0005562,1.72e-08,4;UBERON:0004177,3.35e-08,7;UBERON:0005057,3.35e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.57470412614962,0.550975469195755,1.96682138424452,4.22212337906934,1.39334510984468,0,0,0,0,0.284338464974843,2.64240395401362,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0,0,0,0,0.545812300115692,0.224723484445085,0,1.28371610830437,0,0,0,0,1.16083695451434,1.13477044938228,0,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0.368277635987565,1.26584954976354,0,0,0,0,0,0,0,0,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,9.10740750575117,5.28513470433845,7.26319133437935,6.60856642895129,4.48406850385229,2.63384084775077,0.393419540227666,1.17903228824749,1.23360899399706,0.334372990781356,2.60737813306872,0.473447805734733,0,0.334231370655521,1.17842362989935,0.221533894583621,0.541607727530031,0,0,0,1.10540007114339,0,0,0.535081656179426,0,0.113309342697566,1.53288197440768,0,1.26509846009751,0.318565414324097,0,0,0,0,0,0,0,2.01606743224732,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,35.2966123971906,20.5918167880846,50.8896776821504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0097453800981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,1.30062222588003,1.00988449083511,2.84567373393656,0.637705090915289,0,2.10655907145603,0.211673582723883,0,3.08876895924805,2.05411211129873,0,0,0.169291777801603,0,1.21079824314629,0,0,0,0,0,0.19538809540204,0,0,0.540911356951966,0.33307196799782,0,0,0,0,1.5602073798847,0,0,0,0,0,0.140669416410513,0,0,0,0,1.10513566212459,0,0,2.21552649829925,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0.183195186803725,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,10.0817183751411,1.85345908419754,3.34150238417457,1.81983059047828,0,0.702793337176017,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37588825977293,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,6.07429507189051,1.5476039091159,0.485996453264197,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0,0.496166021811951,0,2.43585196761792,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,1.14681839138014,0.110929051536852,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,2.39984875025916,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.834979926253974,0,0,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,0,0.570742291745161,0,0,0,0,0,0,0,0,0,0.0887023701626388,1.49804183822513,0,0.951576261675644,0.197318320688547,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.771741581079447,0.218559560503957,0,0,0,1.57046773691956,0.297046400327086,0,0,0.375935671919414,0.257831551894309,2.59847005404815,0,0,0,0,0,0.286679166302903,0.788857810965923,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.827463966895162,0,0,6.07135752458457,3.16581042908875,0,0,0,0,0,1.95320953742304,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,1.81146414231924,2.56454793842586 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.57470412614962,0.550975469195755,1.96682138424452,4.22212337906934,1.39334510984468,0,0,0,0,0.284338464974843,2.64240395401362,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0,0,0,0,0.545812300115692,0.224723484445085,0,1.28371610830437,0,0,0,0,1.16083695451434,1.13477044938228,0,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0.368277635987565,1.26584954976354,0,0,0,0,0,0,0,0,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,9.10740750575117,5.28513470433845,7.26319133437935,6.60856642895129,4.48406850385229,2.63384084775077,0.393419540227666,1.17903228824749,1.23360899399706,0.334372990781356,2.60737813306872,0.473447805734733,0,0.334231370655521,1.17842362989935,0.221533894583621,0.541607727530031,0,0,0,1.10540007114339,0,0,0.535081656179426,0,0.113309342697566,1.53288197440768,0,1.26509846009751,0.318565414324097,0,0,0,0,0,0,0,2.01606743224732,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,35.2966123971906,20.5918167880846,50.8896776821504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0097453800981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,1.30062222588003,1.00988449083511,2.84567373393656,0.637705090915289,0,2.10655907145603,0.211673582723883,0,3.08876895924805,2.05411211129873,0,0,0.169291777801603,0,1.21079824314629,0,0,0,0,0,0.19538809540204,0,0,0.540911356951966,0.33307196799782,0,0,0,0,1.5602073798847,0,0,0,0,0,0.140669416410513,0,0,0,0,1.10513566212459,0,0,2.21552649829925,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0.183195186803725,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,10.0817183751411,1.85345908419754,3.34150238417457,1.81983059047828,0,0.702793337176017,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37588825977293,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,6.07429507189051,1.5476039091159,0.485996453264197,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0,0.496166021811951,0,2.43585196761792,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,1.14681839138014,0.110929051536852,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,2.39984875025916,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.834979926253974,0,0,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,0,0.570742291745161,0,0,0,0,0,0,0,0,0,0.0887023701626388,1.49804183822513,0,0.951576261675644,0.197318320688547,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.771741581079447,0.218559560503957,0,0,0,1.57046773691956,0.297046400327086,0,0,0.375935671919414,0.257831551894309,2.59847005404815,0,0,0,0,0,0.286679166302903,0.788857810965923,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.827463966895162,0,0,6.07135752458457,3.16581042908875,0,0,0,0,0,1.95320953742304,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,1.81146414231924,2.56454793842586 | ||
|short_description=p@chr18:13612559..13612571,+ | |short_description=p@chr18:13612559..13612571,+ | ||
}} | }} |
Revision as of 15:43, 20 November 2012
Short description: | p@chr18:13612559..13612571, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:13612559..13612571, + |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.72e-08 | 4 |
hemolymphoid system gland | 1.72e-08 | 4 |
thymic region | 1.72e-08 | 4 |
pharyngeal gland | 1.72e-08 | 4 |
thymus primordium | 1.72e-08 | 4 |
hemopoietic organ | 3.35e-08 | 7 |
immune organ | 3.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.56e-12 | 10 |
hematologic cancer | 9.36e-10 | 51 |
immune system cancer | 9.36e-10 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.