FFCP PHASE1:Mm9::chr14:47707200..47707205,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:47707200..47707205,+|id=chr14:47707200..47707205,+|ontology_enrichment_celltype=CL:0002027!4.14e-12!3;CL:0002006!4.14e-12!3;CL:0002024!4.14e-12!3;CL:0000050!6.70e-07!9|ontology_enrichment_celltype_v019_2=CL:0002027,3.41e-17,3;CL:0002006,3.41e-17,3;CL:0002024,3.41e-17,3;CL:0000553,4.19e-09,6;CL:0000556,4.19e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!7.32e-11!6;UBERON:0004457!7.32e-11!6;UBERON:0000042!7.32e-11!6;UBERON:0004854!7.32e-11!6;UBERON:0009034!7.32e-11!6;UBERON:0002095!7.32e-11!6;UBERON:0004782!7.32e-11!6;UBERON:0003281!7.32e-11!6;UBERON:0009664!7.32e-11!6;UBERON:0002296!7.32e-11!6;UBERON:0005602!7.32e-11!6;UBERON:0001179!7.32e-11!6;UBERON:0006293!7.32e-11!6;UBERON:0004872!1.13e-09!33;UBERON:0003887!1.22e-09!10;UBERON:0000981!7.68e-09!4;UBERON:0002495!7.68e-09!4;UBERON:0003608!7.68e-09!4;UBERON:0003826!7.68e-09!4;UBERON:0008202!7.68e-09!4;UBERON:0004375!7.68e-09!4;UBERON:0002428!7.68e-09!4;UBERON:0003464!7.68e-09!4;UBERON:0003606!7.68e-09!4;UBERON:0009749!7.68e-09!4;UBERON:0003860!7.68e-09!4;UBERON:0005856!7.68e-09!4;UBERON:0005866!7.68e-09!4;UBERON:0007828!7.68e-09!4;UBERON:0005254!7.68e-09!4;UBERON:0001271!7.68e-09!4;UBERON:0002091!7.68e-09!4;UBERON:0001464!7.68e-09!4;UBERON:0003285!7.68e-09!4;UBERON:0010129!7.68e-09!4;UBERON:0006234!7.68e-09!4;UBERON:0003081!7.40e-08!88;UBERON:0005418!3.73e-07!5;UBERON:0002472!3.73e-07!5;UBERON:0008784!3.73e-07!5;UBERON:0006058!3.73e-07!5;UBERON:0007823!3.73e-07!5;UBERON:0004709!3.73e-07!5;UBERON:0005420!3.73e-07!5;UBERON:0006057!3.73e-07!5;UBERON:0000978!3.73e-07!5;UBERON:0002103!3.73e-07!5;UBERON:0000376!3.73e-07!5;UBERON:0000154!3.73e-07!5;UBERON:0005730!3.73e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.28e-34,6;UBERON:0004457,4.28e-34,6;UBERON:0000042,4.28e-34,6;UBERON:0004854,4.28e-34,6;UBERON:0009034,4.28e-34,6;UBERON:0002095,4.28e-34,6;UBERON:0004782,4.28e-34,6;UBERON:0003281,4.28e-34,6;UBERON:0009664,4.28e-34,6;UBERON:0002296,4.28e-34,6;UBERON:0005602,4.28e-34,6;UBERON:0001179,4.28e-34,6;UBERON:0006293,4.28e-34,6;UBERON:0003887,1.00e-20,10;UBERON:0000945,3.64e-13,16;UBERON:0010039,3.64e-13,16;UBERON:0002075,3.65e-11,19;UBERON:0002390,3.12e-10,45;UBERON:0003061,3.12e-10,45;UBERON:0002193,1.33e-09,48;UBERON:0002405,1.33e-09,48;UBERON:0004923,6.22e-09,24;UBERON:0004177,1.84e-07,29;UBERON:0005057,1.84e-07,29;UBERON:0003081,3.43e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,1.39912375625629,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.405344047729279,0.292399974850665,0.658650345873152,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22132145037209,0,0,2.0720530270516,2.32380187125743,2.0590035588587,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:47707200..47707205,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:47707200..47707205,+ | |||
|id=chr14:47707200..47707205,+ | |||
|ontology_enrichment_celltype=CL:0002027!4.14e-12!3;CL:0002006!4.14e-12!3;CL:0002024!4.14e-12!3;CL:0000050!6.70e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,3.41e-17,3;CL:0002006,3.41e-17,3;CL:0002024,3.41e-17,3;CL:0000553,4.19e-09,6;CL:0000556,4.19e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!7.32e-11!6;UBERON:0004457!7.32e-11!6;UBERON:0000042!7.32e-11!6;UBERON:0004854!7.32e-11!6;UBERON:0009034!7.32e-11!6;UBERON:0002095!7.32e-11!6;UBERON:0004782!7.32e-11!6;UBERON:0003281!7.32e-11!6;UBERON:0009664!7.32e-11!6;UBERON:0002296!7.32e-11!6;UBERON:0005602!7.32e-11!6;UBERON:0001179!7.32e-11!6;UBERON:0006293!7.32e-11!6;UBERON:0004872!1.13e-09!33;UBERON:0003887!1.22e-09!10;UBERON:0000981!7.68e-09!4;UBERON:0002495!7.68e-09!4;UBERON:0003608!7.68e-09!4;UBERON:0003826!7.68e-09!4;UBERON:0008202!7.68e-09!4;UBERON:0004375!7.68e-09!4;UBERON:0002428!7.68e-09!4;UBERON:0003464!7.68e-09!4;UBERON:0003606!7.68e-09!4;UBERON:0009749!7.68e-09!4;UBERON:0003860!7.68e-09!4;UBERON:0005856!7.68e-09!4;UBERON:0005866!7.68e-09!4;UBERON:0007828!7.68e-09!4;UBERON:0005254!7.68e-09!4;UBERON:0001271!7.68e-09!4;UBERON:0002091!7.68e-09!4;UBERON:0001464!7.68e-09!4;UBERON:0003285!7.68e-09!4;UBERON:0010129!7.68e-09!4;UBERON:0006234!7.68e-09!4;UBERON:0003081!7.40e-08!88;UBERON:0005418!3.73e-07!5;UBERON:0002472!3.73e-07!5;UBERON:0008784!3.73e-07!5;UBERON:0006058!3.73e-07!5;UBERON:0007823!3.73e-07!5;UBERON:0004709!3.73e-07!5;UBERON:0005420!3.73e-07!5;UBERON:0006057!3.73e-07!5;UBERON:0000978!3.73e-07!5;UBERON:0002103!3.73e-07!5;UBERON:0000376!3.73e-07!5;UBERON:0000154!3.73e-07!5;UBERON:0005730!3.73e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.28e-34,6;UBERON:0004457,4.28e-34,6;UBERON:0000042,4.28e-34,6;UBERON:0004854,4.28e-34,6;UBERON:0009034,4.28e-34,6;UBERON:0002095,4.28e-34,6;UBERON:0004782,4.28e-34,6;UBERON:0003281,4.28e-34,6;UBERON:0009664,4.28e-34,6;UBERON:0002296,4.28e-34,6;UBERON:0005602,4.28e-34,6;UBERON:0001179,4.28e-34,6;UBERON:0006293,4.28e-34,6;UBERON:0003887,1.00e-20,10;UBERON:0000945,3.64e-13,16;UBERON:0010039,3.64e-13,16;UBERON:0002075,3.65e-11,19;UBERON:0002390,3.12e-10,45;UBERON:0003061,3.12e-10,45;UBERON:0002193,1.33e-09,48;UBERON:0002405,1.33e-09,48;UBERON:0004923,6.22e-09,24;UBERON:0004177,1.84e-07,29;UBERON:0005057,1.84e-07,29;UBERON:0003081,3.43e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,1.39912375625629,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.405344047729279,0.292399974850665,0.658650345873152,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22132145037209,0,0,2.0720530270516,2.32380187125743,2.0590035588587,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:47707200..47707205,+ | |||
}} |
Revision as of 02:11, 13 September 2013
Short description: | p@chr14:47707200..47707205, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:47707200..47707205, + |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 3.41e-17 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.41e-17 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.41e-17 | 3 |
megakaryocyte progenitor cell | 4.19e-09 | 6 |
megakaryocyte | 4.19e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.28e-34 | 6 |
cavity lining | 4.28e-34 | 6 |
serous membrane | 4.28e-34 | 6 |
gastrointestinal system mesentery | 4.28e-34 | 6 |
stomach region | 4.28e-34 | 6 |
mesentery | 4.28e-34 | 6 |
gastrointestinal system serosa | 4.28e-34 | 6 |
mesentery of stomach | 4.28e-34 | 6 |
gut mesentery | 4.28e-34 | 6 |
dorsal mesentery | 4.28e-34 | 6 |
dorsal mesogastrium | 4.28e-34 | 6 |
peritoneal cavity | 4.28e-34 | 6 |
spleen primordium | 4.28e-34 | 6 |
intraembryonic coelom | 1.00e-20 | 10 |
stomach | 3.64e-13 | 16 |
food storage organ | 3.64e-13 | 16 |
viscus | 3.65e-11 | 19 |
hematopoietic system | 3.12e-10 | 45 |
blood island | 3.12e-10 | 45 |
hemolymphoid system | 1.33e-09 | 48 |
immune system | 1.33e-09 | 48 |
organ component layer | 6.22e-09 | 24 |
hemopoietic organ | 1.84e-07 | 29 |
immune organ | 1.84e-07 | 29 |
lateral plate mesoderm | 3.43e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.