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FFCP PHASE1:Mm9::chr2:158201991..158202031,+: Difference between revisions

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|id=chr2:158201991..158202031,+
|id=chr2:158201991..158202031,+
|ontology_enrichment_celltype=CL:0000117!2.63e-10!23;CL:0000337!2.63e-10!23;CL:0000540!2.44e-09!33;CL:0000047!2.44e-09!33;CL:0000031!2.44e-09!33;CL:0000404!2.44e-09!33;CL:0000221!7.28e-07!44;CL:0000133!7.28e-07!44
|ontology_enrichment_celltype=CL:0000117!2.63e-10!23;CL:0000337!2.63e-10!23;CL:0000540!2.44e-09!33;CL:0000047!2.44e-09!33;CL:0000031!2.44e-09!33;CL:0000404!2.44e-09!33;CL:0000221!7.28e-07!44;CL:0000133!7.28e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-15,23;CL:0000337,3.41e-15,23;CL:0000540,1.19e-09,33;CL:0000047,1.19e-09,33;CL:0000031,1.19e-09,33;CL:0000404,1.19e-09,33;CL:0002614,1.00e-07,3;CL:0000393,1.04e-07,39;CL:0000211,1.04e-07,39;CL:0002610,2.40e-07,3;CL:0002612,4.59e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.74e-22!75;UBERON:0001016!4.74e-22!75;UBERON:0001017!3.84e-21!73;UBERON:0005743!3.84e-21!73;UBERON:0001049!6.45e-19!52;UBERON:0005068!6.45e-19!52;UBERON:0006241!6.45e-19!52;UBERON:0007135!6.45e-19!52;UBERON:0002346!8.60e-18!71;UBERON:0003075!8.60e-18!71;UBERON:0007284!8.60e-18!71;UBERON:0000955!1.62e-17!50;UBERON:0006238!1.62e-17!50;UBERON:0004121!4.41e-17!102;UBERON:0000924!4.41e-17!102;UBERON:0006601!4.41e-17!102;UBERON:0002616!9.41e-17!49;UBERON:0000033!9.27e-16!63;UBERON:0002020!1.01e-15!34;UBERON:0003080!1.78e-12!40;UBERON:0003056!3.50e-12!49;UBERON:0002791!4.04e-12!29;UBERON:0003528!4.04e-12!29;UBERON:0001893!4.04e-12!29;UBERON:0002780!1.05e-11!39;UBERON:0001890!1.05e-11!39;UBERON:0006240!1.05e-11!39;UBERON:0007811!2.04e-10!86;UBERON:0002021!6.44e-10!10;UBERON:0000411!6.44e-10!10;UBERON:0001950!6.44e-10!10;UBERON:0000153!7.73e-09!94;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12;UBERON:0002420!2.63e-07!8;UBERON:0007245!2.63e-07!8;UBERON:0010009!2.63e-07!8;UBERON:0010011!2.63e-07!8;UBERON:0000454!2.63e-07!8;UBERON:0002619!4.02e-07!17;UBERON:0002298!5.81e-07!6;UBERON:0000956!8.14e-07!21;UBERON:0001869!8.14e-07!21;UBERON:0000203!8.14e-07!21
|ontology_enrichment_uberon=UBERON:0000073!4.74e-22!75;UBERON:0001016!4.74e-22!75;UBERON:0001017!3.84e-21!73;UBERON:0005743!3.84e-21!73;UBERON:0001049!6.45e-19!52;UBERON:0005068!6.45e-19!52;UBERON:0006241!6.45e-19!52;UBERON:0007135!6.45e-19!52;UBERON:0002346!8.60e-18!71;UBERON:0003075!8.60e-18!71;UBERON:0007284!8.60e-18!71;UBERON:0000955!1.62e-17!50;UBERON:0006238!1.62e-17!50;UBERON:0004121!4.41e-17!102;UBERON:0000924!4.41e-17!102;UBERON:0006601!4.41e-17!102;UBERON:0002616!9.41e-17!49;UBERON:0000033!9.27e-16!63;UBERON:0002020!1.01e-15!34;UBERON:0003080!1.78e-12!40;UBERON:0003056!3.50e-12!49;UBERON:0002791!4.04e-12!29;UBERON:0003528!4.04e-12!29;UBERON:0001893!4.04e-12!29;UBERON:0002780!1.05e-11!39;UBERON:0001890!1.05e-11!39;UBERON:0006240!1.05e-11!39;UBERON:0007811!2.04e-10!86;UBERON:0002021!6.44e-10!10;UBERON:0000411!6.44e-10!10;UBERON:0001950!6.44e-10!10;UBERON:0000153!7.73e-09!94;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12;UBERON:0002420!2.63e-07!8;UBERON:0007245!2.63e-07!8;UBERON:0010009!2.63e-07!8;UBERON:0010011!2.63e-07!8;UBERON:0000454!2.63e-07!8;UBERON:0002619!4.02e-07!17;UBERON:0002298!5.81e-07!6;UBERON:0000956!8.14e-07!21;UBERON:0001869!8.14e-07!21;UBERON:0000203!8.14e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-39,54;UBERON:0001049,4.44e-36,52;UBERON:0005068,4.44e-36,52;UBERON:0006241,4.44e-36,52;UBERON:0007135,4.44e-36,52;UBERON:0001017,1.13e-35,73;UBERON:0001016,1.63e-34,75;UBERON:0002020,1.81e-29,34;UBERON:0002346,5.80e-28,64;UBERON:0003075,5.80e-28,64;UBERON:0007284,5.80e-28,64;UBERON:0000955,9.29e-28,47;UBERON:0006238,9.29e-28,47;UBERON:0002616,4.00e-26,46;UBERON:0004121,1.36e-25,95;UBERON:0000924,1.36e-25,95;UBERON:0006601,1.36e-25,95;UBERON:0010371,1.26e-23,73;UBERON:0002021,1.46e-21,10;UBERON:0000411,1.46e-21,10;UBERON:0001950,1.46e-21,10;UBERON:0003528,2.66e-21,29;UBERON:0002791,2.66e-21,29;UBERON:0001893,2.66e-21,29;UBERON:0003080,1.64e-20,40;UBERON:0002780,7.34e-19,39;UBERON:0001890,7.34e-19,39;UBERON:0006240,7.34e-19,39;UBERON:0003076,2.34e-17,12;UBERON:0003057,2.34e-17,12;UBERON:0010314,2.96e-17,92;UBERON:0003056,8.63e-16,49;UBERON:0002619,2.87e-14,17;UBERON:0000956,3.28e-13,21;UBERON:0001869,3.28e-13,21;UBERON:0000203,3.28e-13,21;UBERON:0000025,1.56e-12,114;UBERON:0002240,1.90e-12,6;UBERON:0005174,1.90e-12,6;UBERON:0001137,1.90e-12,6;UBERON:0004111,3.05e-11,122;UBERON:0001948,3.24e-10,5;UBERON:0002315,3.24e-10,5;UBERON:0002950,6.82e-10,4;UBERON:0001891,6.82e-10,4;UBERON:0009616,6.82e-10,4;UBERON:0010286,6.82e-10,4;UBERON:0002420,1.32e-09,8;UBERON:0007245,1.32e-09,8;UBERON:0010009,1.32e-09,8;UBERON:0010011,1.32e-09,8;UBERON:0000454,1.32e-09,8;UBERON:0011216,3.15e-09,194;UBERON:0002038,1.00e-07,3;UBERON:0009663,1.00e-07,3;UBERON:0009661,1.00e-07,3;UBERON:0000125,1.00e-07,3;UBERON:0002308,1.00e-07,3;UBERON:0004684,2.40e-07,3;UBERON:0002275,2.40e-07,3;UBERON:0002257,4.59e-07,3;UBERON:0004733,6.82e-07,6;UBERON:0004732,6.82e-07,6;UBERON:0002028,6.82e-07,6;UBERON:0007277,6.82e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0.210324961351382,1.42825492201902,1.10434270475807,0.122490799214954,0,0,4.40463523997555,2.68143409978894,3.07213066512487,1.05509030184155,0.457438218012048,0.52091337055676,3.62937898701795,4.50210088025344,3.51435969886663,3.53554302568401,2.98980529678116,1.4911955666024,0.227178579999552,0.377857800533928,0,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,2.92780797011547,16.546289838263,0,0,0,0,5.24267237916879,6.8625090422794,1.13088916901578,2.43354048269187,3.83573185995496,3.74018480207208,6.16516799657479,0,0,0,0.210441855886474,0,0,0,0.90422890701429,0.340182495756639,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,2.73376933133365,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,6.90367536947505,6.79827782234778,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,3.21321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0,0,0,1.12950368523413,3.22227665555024,3.43737308063638,3.43706364687375,6.16574267793578,3.7769694869485,4.05013500139084,5.40385443869065,1.81256963593682,7.7664046762773,0.103787347584177,0.399024873401031,0.853668028770671,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0,0,0.25347929989024,0.754505365544305,0.37456602987953,0.512201219238954,0.34461281373368,0,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.679020569229309,0,0.711810108745045,0.29551344712669,0.818462086339379,0,0.192906610981141,0,0,0.429742108096597,1.3390183244819,0.882365676478062,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0.210324961351382,1.42825492201902,1.10434270475807,0.122490799214954,0,0,4.40463523997555,2.68143409978894,3.07213066512487,1.05509030184155,0.457438218012048,0.52091337055676,3.62937898701795,4.50210088025344,3.51435969886663,3.53554302568401,2.98980529678116,1.4911955666024,0.227178579999552,0.377857800533928,0,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,2.92780797011547,16.546289838263,0,0,0,0,5.24267237916879,6.8625090422794,1.13088916901578,2.43354048269187,3.83573185995496,3.74018480207208,6.16516799657479,0,0,0,0.210441855886474,0,0,0,0.90422890701429,0.340182495756639,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,2.73376933133365,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,6.90367536947505,6.79827782234778,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,3.21321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0,0,0,1.12950368523413,3.22227665555024,3.43737308063638,3.43706364687375,6.16574267793578,3.7769694869485,4.05013500139084,5.40385443869065,1.81256963593682,7.7664046762773,0.103787347584177,0.399024873401031,0.853668028770671,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0,0,0.25347929989024,0.754505365544305,0.37456602987953,0.512201219238954,0.34461281373368,0,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.679020569229309,0,0.711810108745045,0.29551344712669,0.818462086339379,0,0.192906610981141,0,0,0.429742108096597,1.3390183244819,0.882365676478062,0.231867835620421
|short_description=p@chr2:158201991..158202031,+
|short_description=p@chr2:158201991..158202031,+
}}
}}

Revision as of 13:48, 13 November 2012

Short description:p@chr2:158201991..158202031, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:158201991..158202031, +
Coexpression cluster:MCL_coexpression_mm9:168
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr2:158201991..158202031+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I216.55
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A36.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.61e-3954
neural tube4.44e-3652
neural rod4.44e-3652
future spinal cord4.44e-3652
neural keel4.44e-3652
central nervous system1.13e-3573
nervous system1.63e-3475
gray matter1.81e-2934
neurectoderm5.80e-2864
neural plate5.80e-2864
presumptive neural plate5.80e-2864
brain9.29e-2847
future brain9.29e-2847
regional part of brain4.00e-2646
ectoderm-derived structure1.36e-2595
ectoderm1.36e-2595
presumptive ectoderm1.36e-2595
ecto-epithelium1.26e-2373
occipital lobe1.46e-2110
visual cortex1.46e-2110
neocortex1.46e-2110
brain grey matter2.66e-2129
regional part of telencephalon2.66e-2129
telencephalon2.66e-2129
anterior neural tube1.64e-2040
regional part of forebrain7.34e-1939
forebrain7.34e-1939
future forebrain7.34e-1939
posterior neural tube2.34e-1712
chordal neural plate2.34e-1712
structure with developmental contribution from neural crest2.96e-1792
pre-chordal neural plate8.63e-1649
regional part of cerebral cortex2.87e-1417
cerebral cortex3.28e-1321
cerebral hemisphere3.28e-1321
pallium3.28e-1321
tube1.56e-12114
spinal cord1.90e-126
dorsal region element1.90e-126
dorsum1.90e-126
anatomical conduit3.05e-11122
regional part of spinal cord3.24e-105
gray matter of spinal cord3.24e-105
regional part of midbrain6.82e-104
midbrain6.82e-104
presumptive midbrain6.82e-104
midbrain neural tube6.82e-104
basal ganglion1.32e-098
nuclear complex of neuraxis1.32e-098
aggregate regional part of brain1.32e-098
collection of basal ganglia1.32e-098
cerebral subcortex1.32e-098
organ system subdivision3.15e-09194
substantia nigra1.00e-073
telencephalic nucleus1.00e-073
midbrain nucleus1.00e-073
neural nucleus1.00e-073
nucleus of brain1.00e-073
raphe nuclei2.40e-073
reticular formation2.40e-073
ventral horn of spinal cord4.59e-073
segmental subdivision of hindbrain6.82e-076
segmental subdivision of nervous system6.82e-076
hindbrain6.82e-076
presumptive hindbrain6.82e-076







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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