FFCP PHASE1:Mm9::chr1:161856364..161856383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:161856364..161856383,+ | |id=chr1:161856364..161856383,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.72e-14!33;CL:0000047!1.72e-14!33;CL:0000031!1.72e-14!33;CL:0000404!1.72e-14!33;CL:0002319!1.63e-11!43;CL:0000221!5.97e-11!44;CL:0000133!5.97e-11!44;CL:0000117!1.10e-10!23;CL:0000337!1.10e-10!23;CL:0000393!2.47e-10!39;CL:0000211!2.47e-10!39;CL:0000055!4.02e-08!50 | |ontology_enrichment_celltype=CL:0000540!1.72e-14!33;CL:0000047!1.72e-14!33;CL:0000031!1.72e-14!33;CL:0000404!1.72e-14!33;CL:0002319!1.63e-11!43;CL:0000221!5.97e-11!44;CL:0000133!5.97e-11!44;CL:0000117!1.10e-10!23;CL:0000337!1.10e-10!23;CL:0000393!2.47e-10!39;CL:0000211!2.47e-10!39;CL:0000055!4.02e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.39e-22,33;CL:0000047,1.39e-22,33;CL:0000031,1.39e-22,33;CL:0000404,1.39e-22,33;CL:0002319,2.37e-18,43;CL:0000393,6.50e-18,39;CL:0000211,6.50e-18,39;CL:0000221,9.51e-18,44;CL:0000133,9.51e-18,44;CL:0000117,1.16e-16,23;CL:0000337,1.16e-16,23;CL:0002321,2.66e-08,70;CL:0000107,6.72e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.17e-31!73;UBERON:0005743!2.17e-31!73;UBERON:0000073!1.73e-30!75;UBERON:0001016!1.73e-30!75;UBERON:0002346!1.21e-29!71;UBERON:0003075!1.21e-29!71;UBERON:0007284!1.21e-29!71;UBERON:0004121!6.41e-29!102;UBERON:0000924!6.41e-29!102;UBERON:0006601!6.41e-29!102;UBERON:0001049!2.88e-23!52;UBERON:0005068!2.88e-23!52;UBERON:0006241!2.88e-23!52;UBERON:0007135!2.88e-23!52;UBERON:0000955!1.57e-22!50;UBERON:0006238!1.57e-22!50;UBERON:0002616!8.57e-22!49;UBERON:0000033!3.20e-21!63;UBERON:0003056!7.90e-20!49;UBERON:0002020!1.76e-18!34;UBERON:0003080!2.77e-18!40;UBERON:0002780!1.67e-17!39;UBERON:0001890!1.67e-17!39;UBERON:0006240!1.67e-17!39;UBERON:0002791!1.71e-15!29;UBERON:0003528!1.71e-15!29;UBERON:0001893!1.71e-15!29;UBERON:0007811!9.93e-11!86;UBERON:0000956!1.09e-10!21;UBERON:0001869!1.09e-10!21;UBERON:0000203!1.09e-10!21;UBERON:0002021!2.25e-09!10;UBERON:0000411!2.25e-09!10;UBERON:0001950!2.25e-09!10;UBERON:0002619!2.19e-08!17;UBERON:0000153!3.18e-08!94 | |ontology_enrichment_uberon=UBERON:0001017!2.17e-31!73;UBERON:0005743!2.17e-31!73;UBERON:0000073!1.73e-30!75;UBERON:0001016!1.73e-30!75;UBERON:0002346!1.21e-29!71;UBERON:0003075!1.21e-29!71;UBERON:0007284!1.21e-29!71;UBERON:0004121!6.41e-29!102;UBERON:0000924!6.41e-29!102;UBERON:0006601!6.41e-29!102;UBERON:0001049!2.88e-23!52;UBERON:0005068!2.88e-23!52;UBERON:0006241!2.88e-23!52;UBERON:0007135!2.88e-23!52;UBERON:0000955!1.57e-22!50;UBERON:0006238!1.57e-22!50;UBERON:0002616!8.57e-22!49;UBERON:0000033!3.20e-21!63;UBERON:0003056!7.90e-20!49;UBERON:0002020!1.76e-18!34;UBERON:0003080!2.77e-18!40;UBERON:0002780!1.67e-17!39;UBERON:0001890!1.67e-17!39;UBERON:0006240!1.67e-17!39;UBERON:0002791!1.71e-15!29;UBERON:0003528!1.71e-15!29;UBERON:0001893!1.71e-15!29;UBERON:0007811!9.93e-11!86;UBERON:0000956!1.09e-10!21;UBERON:0001869!1.09e-10!21;UBERON:0000203!1.09e-10!21;UBERON:0002021!2.25e-09!10;UBERON:0000411!2.25e-09!10;UBERON:0001950!2.25e-09!10;UBERON:0002619!2.19e-08!17;UBERON:0000153!3.18e-08!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.44e-51,73;UBERON:0001016,3.11e-49,75;UBERON:0002346,1.54e-43,64;UBERON:0003075,1.54e-43,64;UBERON:0007284,1.54e-43,64;UBERON:0000073,2.09e-43,54;UBERON:0004121,1.79e-42,95;UBERON:0000924,1.79e-42,95;UBERON:0006601,1.79e-42,95;UBERON:0001049,2.64e-40,52;UBERON:0005068,2.64e-40,52;UBERON:0006241,2.64e-40,52;UBERON:0007135,2.64e-40,52;UBERON:0010371,1.82e-36,73;UBERON:0000955,1.55e-34,47;UBERON:0006238,1.55e-34,47;UBERON:0002020,7.20e-34,34;UBERON:0002616,3.04e-33,46;UBERON:0003080,3.15e-30,40;UBERON:0003056,5.84e-30,49;UBERON:0002780,7.87e-29,39;UBERON:0001890,7.87e-29,39;UBERON:0006240,7.87e-29,39;UBERON:0010314,1.17e-28,92;UBERON:0003528,2.05e-28,29;UBERON:0002791,2.05e-28,29;UBERON:0001893,2.05e-28,29;UBERON:0000956,1.22e-19,21;UBERON:0001869,1.22e-19,21;UBERON:0000203,1.22e-19,21;UBERON:0002021,1.20e-15,10;UBERON:0000411,1.20e-15,10;UBERON:0001950,1.20e-15,10;UBERON:0002619,1.97e-15,17;UBERON:0000025,7.80e-12,114;UBERON:0004111,2.57e-10,122;UBERON:0003076,5.66e-10,12;UBERON:0003057,5.66e-10,12;UBERON:0011216,5.74e-10,194;UBERON:0002420,8.36e-10,8;UBERON:0007245,8.36e-10,8;UBERON:0010009,8.36e-10,8;UBERON:0010011,8.36e-10,8;UBERON:0000454,8.36e-10,8;UBERON:0002410,6.72e-08,9;UBERON:0002240,8.61e-08,6;UBERON:0005174,8.61e-08,6;UBERON:0001137,8.61e-08,6;UBERON:0000483,1.27e-07,174;UBERON:0000119,2.13e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,1.19840044207362,1.92109152660777,2.17748185847803,2.02508907497536,1.89292465216244,1.14260393761521,1.10434270475807,1.34739879136449,1.82106394934649,0,12.1127469099328,14.5563565417114,19.8152427900554,1.18697658957174,2.01272815925301,1.04182674111352,3.62937898701795,5.06486349028512,15.4326230254578,14.142172102736,6.54909731675874,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03909497345377,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.705532242814229,1.38233250462643,0,0,0,0,0,0,0,8.19786231632332,6.91174132484402,0,0,0,0,13.7807388252437,8.23501085073528,7.66491547888473,10.6032835317289,31.708716708961,11.8439185398949,20.1179166204019,0.101839363850316,0,0,2.31486041475121,0.260240885925407,0,0,0.60281927134286,1.15662048557257,1.40925092313335,0.843315521037559,13.7112786491678,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,9.88362758251398,5.76265829323993,0.330418782983798,0,0.639864751605702,0.928946687441754,0.128867461322093,0.605050573870028,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,6.58257418949947,9.61135830056066,0.327869890753351,0,2.2085575359138,1.17131623288992,3.87762115919038,1.19484398976276,2.22798674082394,0.566153061577665,1.61924280669958,2.92255857911312,2.76701444562566,9.3183181762324,0,0,0,0,0,0.485561272309963,0.302323556964751,1.69744571780308,0.295301892880773,0.922305443831782,0,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,7.83011093233712,0.18006109403131,0,0,0.532020700926821,1.60531935841864,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0.164140899745061,0,12.6089205367147,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,26.5433366030021,16.5717085142584,28.6447756719698,19.5912627871804,13.0165678756422,16.6186657425734,10.1253375034771,11.7083512838297,17.672553950384,11.9084871702919,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.188626341386076,0.468207537349412,0.768301828858431,0.631790158511746,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.294397840268795,1.02860775715625,0.887379030796687,0.238436189947321,0.436039249896986,0.564656282491984,0.507687647350059,0.914639864363863,1.8414879800649,1.08643291076689,0.561142271657738,0.593175090620871,0.886540341380071,0.409231043169689,0.619747364743864,0.771626443924566,0.999242311751784,0.467863216890817,0.429742108096597,0,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,1.19840044207362,1.92109152660777,2.17748185847803,2.02508907497536,1.89292465216244,1.14260393761521,1.10434270475807,1.34739879136449,1.82106394934649,0,12.1127469099328,14.5563565417114,19.8152427900554,1.18697658957174,2.01272815925301,1.04182674111352,3.62937898701795,5.06486349028512,15.4326230254578,14.142172102736,6.54909731675874,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03909497345377,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.705532242814229,1.38233250462643,0,0,0,0,0,0,0,8.19786231632332,6.91174132484402,0,0,0,0,13.7807388252437,8.23501085073528,7.66491547888473,10.6032835317289,31.708716708961,11.8439185398949,20.1179166204019,0.101839363850316,0,0,2.31486041475121,0.260240885925407,0,0,0.60281927134286,1.15662048557257,1.40925092313335,0.843315521037559,13.7112786491678,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,9.88362758251398,5.76265829323993,0.330418782983798,0,0.639864751605702,0.928946687441754,0.128867461322093,0.605050573870028,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,6.58257418949947,9.61135830056066,0.327869890753351,0,2.2085575359138,1.17131623288992,3.87762115919038,1.19484398976276,2.22798674082394,0.566153061577665,1.61924280669958,2.92255857911312,2.76701444562566,9.3183181762324,0,0,0,0,0,0.485561272309963,0.302323556964751,1.69744571780308,0.295301892880773,0.922305443831782,0,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,7.83011093233712,0.18006109403131,0,0,0.532020700926821,1.60531935841864,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0.164140899745061,0,12.6089205367147,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,26.5433366030021,16.5717085142584,28.6447756719698,19.5912627871804,13.0165678756422,16.6186657425734,10.1253375034771,11.7083512838297,17.672553950384,11.9084871702919,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.188626341386076,0.468207537349412,0.768301828858431,0.631790158511746,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.294397840268795,1.02860775715625,0.887379030796687,0.238436189947321,0.436039249896986,0.564656282491984,0.507687647350059,0.914639864363863,1.8414879800649,1.08643291076689,0.561142271657738,0.593175090620871,0.886540341380071,0.409231043169689,0.619747364743864,0.771626443924566,0.999242311751784,0.467863216890817,0.429742108096597,0,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr1:161856364..161856383,+ | |short_description=p@chr1:161856364..161856383,+ | ||
}} | }} |
Revision as of 05:05, 14 November 2012
Short description: | p@chr1:161856364..161856383, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:161856364..161856383, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.39e-22 | 33 |
neuronal stem cell | 1.39e-22 | 33 |
neuroblast | 1.39e-22 | 33 |
electrically signaling cell | 1.39e-22 | 33 |
neural cell | 2.37e-18 | 43 |
electrically responsive cell | 6.50e-18 | 39 |
electrically active cell | 6.50e-18 | 39 |
ectodermal cell | 9.51e-18 | 44 |
neurectodermal cell | 9.51e-18 | 44 |
CNS neuron (sensu Vertebrata) | 1.16e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-16 | 23 |
embryonic cell | 2.66e-08 | 70 |
autonomic neuron | 6.72e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.