FFCP PHASE1:Hg19::chr10:99627478..99627480,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=401647|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31668|TSSclassifier=N|UniProt=Q6ZUQ1|association_with_transcript=-408bp_to_AK125454_5end|description=CAGE_peak_3_at_GOLGA7B_5end|id=chr10:99627478..99627480,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;9.76e-16;3!UBERON:0007297;7.60e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;7.60e-07;2|ontology_enrichment_disease_v019_2=DOID:3910,5.41e-07,2|ontology_enrichment_uberon=UBERON:0001049!8.54e-45!57;UBERON:0005068!8.54e-45!57;UBERON:0006241!8.54e-45!57;UBERON:0007135!8.54e-45!57;UBERON:0002616!4.62e-38!59;UBERON:0000955!3.20e-36!69;UBERON:0006238!3.20e-36!69;UBERON:0001017!9.13e-36!82;UBERON:0005743!3.38e-35!86;UBERON:0007023!1.65e-34!115;UBERON:0003075!8.66e-34!86;UBERON:0007284!8.66e-34!86;UBERON:0002780!6.15e-33!41;UBERON:0001890!6.15e-33!41;UBERON:0006240!6.15e-33!41;UBERON:0000073!5.05e-32!94;UBERON:0001016!5.05e-32!94;UBERON:0003080!6.04e-32!42;UBERON:0002346!1.14e-31!90;UBERON:0002020!1.16e-30!34;UBERON:0003528!1.16e-30!34;UBERON:0001893!4.31e-30!34;UBERON:0002791!1.27e-28!33;UBERON:0001869!9.95e-28!32;UBERON:0002619!1.43e-26!22;UBERON:0003056!4.95e-24!61;UBERON:0001950!3.85e-23!20;UBERON:0000956!8.24e-23!25;UBERON:0000203!8.24e-23!25;UBERON:0000153!6.06e-20!129;UBERON:0007811!6.06e-20!129;UBERON:0000033!2.83e-19!123;UBERON:0004121!6.71e-17!169;UBERON:0000924!3.55e-16!173;UBERON:0006601!3.55e-16!173;UBERON:0003076!1.13e-13!15;UBERON:0003057!1.13e-13!15;UBERON:0001871!6.68e-12!7;UBERON:0004733!9.09e-12!12;UBERON:0002028!9.09e-12!12;UBERON:0007277!9.09e-12!12;UBERON:0004732!1.06e-10!13;UBERON:0002298!1.34e-10!8;UBERON:0002021!1.35e-10!5;UBERON:0000025!2.18e-10!194;UBERON:0002308!3.05e-09!9;UBERON:0000125!3.05e-09!9;UBERON:0000200!8.57e-08!6;UBERON:0002680!1.55e-07!9;UBERON:0001895!1.55e-07!9;UBERON:0010092!1.55e-07!9;UBERON:0000064!3.19e-07!219;UBERON:0004111!5.45e-07!241;UBERON:0002420!8.50e-07!9;UBERON:0007245!8.50e-07!9;UBERON:0010009!8.50e-07!9;UBERON:0010011!8.50e-07!9;UBERON:0000454!8.50e-07!9|ontology_enrichment_uberon_v019=UBERON:0001950;3.95e-25;20!UBERON:0001905;4.35e-23;2!UBERON:0002757;4.35e-23;2!UBERON:0010134;4.35e-23;2!UBERON:0005408;4.35e-23;2!UBERON:0001899;4.35e-23;2!UBERON:0002619;6.71e-23;22!UBERON:0002021;1.62e-20;5!UBERON:0000956;3.40e-20;25!UBERON:0000203;3.40e-20;25!UBERON:0002780;2.54e-15;41!UBERON:0001890;2.54e-15;41!UBERON:0001871;7.70e-15;6!UBERON:0002791;2.40e-14;32!UBERON:0001869;2.40e-14;32!UBERON:0003528;3.24e-13;34!UBERON:0002020;3.24e-13;34!UBERON:0001301;1.96e-12;1!UBERON:0003296;4.82e-12;4!UBERON:0010133;4.82e-12;4!UBERON:0002784;4.82e-12;4!UBERON:0001893;6.13e-12;34!UBERON:0000073;7.40e-12;53!UBERON:0002616;7.40e-12;53!UBERON:0001017;4.05e-10;75!UBERON:0000955;9.43e-10;68!UBERON:0002037;2.51e-08;6!UBERON:0001894;2.95e-07;7!UBERON:0001016;5.29e-07;83!UBERON:0002771;7.60e-07;2!UBERON:0004903;7.60e-07;2!UBERON:0002173;7.60e-07;2!UBERON:0002186;7.60e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.56e-25,20;UBERON:0000073,3.28e-23,53;UBERON:0002616,3.28e-23,53;UBERON:0002619,6.11e-23,22;UBERON:0001905,2.08e-22,2;UBERON:0002757,2.08e-22,2;UBERON:0010134,2.08e-22,2;UBERON:0005408,2.08e-22,2;UBERON:0001899,2.08e-22,2;UBERON:0001049,6.50e-22,56;UBERON:0005068,6.50e-22,56;UBERON:0006241,6.50e-22,56;UBERON:0007135,6.50e-22,56;UBERON:0000955,4.32e-21,68;UBERON:0006238,4.32e-21,68;UBERON:0002021,2.13e-20,5;UBERON:0000956,3.13e-20,25;UBERON:0000203,3.13e-20,25;UBERON:0002780,4.48e-20,41;UBERON:0001890,4.48e-20,41;UBERON:0003080,4.48e-20,41;UBERON:0006240,4.48e-20,41;UBERON:0001017,1.56e-17,81;UBERON:0002791,8.11e-16,32;UBERON:0001869,8.11e-16,32;UBERON:0001016,1.18e-15,89;UBERON:0003528,7.03e-15,34;UBERON:0002020,7.03e-15,34;UBERON:0001893,7.03e-15,34;UBERON:0001871,7.03e-15,6;UBERON:0003075,1.37e-14,82;UBERON:0007284,1.37e-14,82;UBERON:0002346,7.53e-14,86;UBERON:0003056,2.96e-13,61;UBERON:0001301,4.31e-12,1;UBERON:0003296,1.05e-11,4;UBERON:0010133,1.05e-11,4;UBERON:0002784,1.05e-11,4;UBERON:0010371,3.25e-11,104;UBERON:0010314,1.58e-08,132;UBERON:0002037,1.74e-08,6;UBERON:0006215,1.74e-08,6;UBERON:0007023,2.32e-08,114;UBERON:0000025,8.18e-08,192;UBERON:0011216,1.30e-07,223;UBERON:0004121,1.84e-07,171;UBERON:0000924,1.84e-07,171;UBERON:0006601,1.84e-07,171;UBERON:0001894,4.57e-07,7;UBERON:0006222,4.57e-07,7;UBERON:0004903,5.41e-07,2;UBERON:0002173,5.41e-07,2;UBERON:0002186,5.41e-07,2;UBERON:0002771,7.61e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0.260118695119756,0,0.829050053357545,0,0.296573126324121,0,0,0,0.383220493601921,0,0.5060393840390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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=401647 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31668 | |||
|TSSclassifier=N | |||
|UniProt=Q6ZUQ1 | |||
|association_with_transcript=-408bp_to_AK125454_5end | |||
|description=CAGE_peak_3_at_GOLGA7B_5end | |||
|id=chr10:99627478..99627480,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.76e-16;3!UBERON:0007297;7.60e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.41e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.54e-45!57;UBERON:0005068!8.54e-45!57;UBERON:0006241!8.54e-45!57;UBERON:0007135!8.54e-45!57;UBERON:0002616!4.62e-38!59;UBERON:0000955!3.20e-36!69;UBERON:0006238!3.20e-36!69;UBERON:0001017!9.13e-36!82;UBERON:0005743!3.38e-35!86;UBERON:0007023!1.65e-34!115;UBERON:0003075!8.66e-34!86;UBERON:0007284!8.66e-34!86;UBERON:0002780!6.15e-33!41;UBERON:0001890!6.15e-33!41;UBERON:0006240!6.15e-33!41;UBERON:0000073!5.05e-32!94;UBERON:0001016!5.05e-32!94;UBERON:0003080!6.04e-32!42;UBERON:0002346!1.14e-31!90;UBERON:0002020!1.16e-30!34;UBERON:0003528!1.16e-30!34;UBERON:0001893!4.31e-30!34;UBERON:0002791!1.27e-28!33;UBERON:0001869!9.95e-28!32;UBERON:0002619!1.43e-26!22;UBERON:0003056!4.95e-24!61;UBERON:0001950!3.85e-23!20;UBERON:0000956!8.24e-23!25;UBERON:0000203!8.24e-23!25;UBERON:0000153!6.06e-20!129;UBERON:0007811!6.06e-20!129;UBERON:0000033!2.83e-19!123;UBERON:0004121!6.71e-17!169;UBERON:0000924!3.55e-16!173;UBERON:0006601!3.55e-16!173;UBERON:0003076!1.13e-13!15;UBERON:0003057!1.13e-13!15;UBERON:0001871!6.68e-12!7;UBERON:0004733!9.09e-12!12;UBERON:0002028!9.09e-12!12;UBERON:0007277!9.09e-12!12;UBERON:0004732!1.06e-10!13;UBERON:0002298!1.34e-10!8;UBERON:0002021!1.35e-10!5;UBERON:0000025!2.18e-10!194;UBERON:0002308!3.05e-09!9;UBERON:0000125!3.05e-09!9;UBERON:0000200!8.57e-08!6;UBERON:0002680!1.55e-07!9;UBERON:0001895!1.55e-07!9;UBERON:0010092!1.55e-07!9;UBERON:0000064!3.19e-07!219;UBERON:0004111!5.45e-07!241;UBERON:0002420!8.50e-07!9;UBERON:0007245!8.50e-07!9;UBERON:0010009!8.50e-07!9;UBERON:0010011!8.50e-07!9;UBERON:0000454!8.50e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.95e-25;20!UBERON:0001905;4.35e-23;2!UBERON:0002757;4.35e-23;2!UBERON:0010134;4.35e-23;2!UBERON:0005408;4.35e-23;2!UBERON:0001899;4.35e-23;2!UBERON:0002619;6.71e-23;22!UBERON:0002021;1.62e-20;5!UBERON:0000956;3.40e-20;25!UBERON:0000203;3.40e-20;25!UBERON:0002780;2.54e-15;41!UBERON:0001890;2.54e-15;41!UBERON:0001871;7.70e-15;6!UBERON:0002791;2.40e-14;32!UBERON:0001869;2.40e-14;32!UBERON:0003528;3.24e-13;34!UBERON:0002020;3.24e-13;34!UBERON:0001301;1.96e-12;1!UBERON:0003296;4.82e-12;4!UBERON:0010133;4.82e-12;4!UBERON:0002784;4.82e-12;4!UBERON:0001893;6.13e-12;34!UBERON:0000073;7.40e-12;53!UBERON:0002616;7.40e-12;53!UBERON:0001017;4.05e-10;75!UBERON:0000955;9.43e-10;68!UBERON:0002037;2.51e-08;6!UBERON:0001894;2.95e-07;7!UBERON:0001016;5.29e-07;83!UBERON:0002771;7.60e-07;2!UBERON:0004903;7.60e-07;2!UBERON:0002173;7.60e-07;2!UBERON:0002186;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.56e-25,20;UBERON:0000073,3.28e-23,53;UBERON:0002616,3.28e-23,53;UBERON:0002619,6.11e-23,22;UBERON:0001905,2.08e-22,2;UBERON:0002757,2.08e-22,2;UBERON:0010134,2.08e-22,2;UBERON:0005408,2.08e-22,2;UBERON:0001899,2.08e-22,2;UBERON:0001049,6.50e-22,56;UBERON:0005068,6.50e-22,56;UBERON:0006241,6.50e-22,56;UBERON:0007135,6.50e-22,56;UBERON:0000955,4.32e-21,68;UBERON:0006238,4.32e-21,68;UBERON:0002021,2.13e-20,5;UBERON:0000956,3.13e-20,25;UBERON:0000203,3.13e-20,25;UBERON:0002780,4.48e-20,41;UBERON:0001890,4.48e-20,41;UBERON:0003080,4.48e-20,41;UBERON:0006240,4.48e-20,41;UBERON:0001017,1.56e-17,81;UBERON:0002791,8.11e-16,32;UBERON:0001869,8.11e-16,32;UBERON:0001016,1.18e-15,89;UBERON:0003528,7.03e-15,34;UBERON:0002020,7.03e-15,34;UBERON:0001893,7.03e-15,34;UBERON:0001871,7.03e-15,6;UBERON:0003075,1.37e-14,82;UBERON:0007284,1.37e-14,82;UBERON:0002346,7.53e-14,86;UBERON:0003056,2.96e-13,61;UBERON:0001301,4.31e-12,1;UBERON:0003296,1.05e-11,4;UBERON:0010133,1.05e-11,4;UBERON:0002784,1.05e-11,4;UBERON:0010371,3.25e-11,104;UBERON:0010314,1.58e-08,132;UBERON:0002037,1.74e-08,6;UBERON:0006215,1.74e-08,6;UBERON:0007023,2.32e-08,114;UBERON:0000025,8.18e-08,192;UBERON:0011216,1.30e-07,223;UBERON:0004121,1.84e-07,171;UBERON:0000924,1.84e-07,171;UBERON:0006601,1.84e-07,171;UBERON:0001894,4.57e-07,7;UBERON:0006222,4.57e-07,7;UBERON:0004903,5.41e-07,2;UBERON:0002173,5.41e-07,2;UBERON:0002186,5.41e-07,2;UBERON:0002771,7.61e-07,2 | |||
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|short_description=p3@GOLGA7B | |||
}} |
Revision as of 15:16, 10 September 2013
Short description: | p3@GOLGA7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GOLGA7B_5end |
Coexpression cluster: | NA |
Association with transcript: | -408bp_to_AK125454_5end |
EntrezGene: | GOLGA7B |
HGNC: | 31668 |
UniProt: | Q6ZUQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.41e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.