FFCP PHASE1:Hg19::chr14:65438792..65438803,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=376267|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20150|TSSclassifier=S|UniProt=P59190|association_with_transcript=71bp_to_ENST00000267512,NM_198686,uc001xhz.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_13_at_RAB15_5end|id=chr14:65438792..65438803,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;1.41e-16;1!CL:0002625;1.41e-16;1!CL:0000216;1.41e-16;1|ontology_enrichment_celltype_v019_2=CL:0000511,7.57e-17,1;CL:0002625,7.57e-17,1;CL:0000216,7.57e-17,1|ontology_enrichment_development_v019=UBERON:0006215;2.95e-21;3!UBERON:0006601;2.79e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!1.83e-39!59;UBERON:0001049!1.67e-38!57;UBERON:0005068!1.67e-38!57;UBERON:0006241!1.67e-38!57;UBERON:0007135!1.67e-38!57;UBERON:0000955!1.78e-38!69;UBERON:0006238!1.78e-38!69;UBERON:0001893!2.20e-38!34;UBERON:0002780!1.69e-36!41;UBERON:0001890!1.69e-36!41;UBERON:0006240!1.69e-36!41;UBERON:0002791!3.48e-36!33;UBERON:0001950!1.22e-35!20;UBERON:0003080!1.86e-35!42;UBERON:0002020!4.36e-35!34;UBERON:0003528!4.36e-35!34;UBERON:0001869!5.93e-35!32;UBERON:0001017!8.45e-35!82;UBERON:0005743!1.09e-32!86;UBERON:0002619!4.60e-32!22;UBERON:0003075!6.16e-31!86;UBERON:0007284!6.16e-31!86;UBERON:0000073!1.96e-30!94;UBERON:0001016!1.96e-30!94;UBERON:0002346!4.39e-29!90;UBERON:0000956!9.76e-28!25;UBERON:0000203!9.76e-28!25;UBERON:0007023!1.91e-26!115;UBERON:0003056!9.18e-26!61;UBERON:0000033!7.19e-21!123;UBERON:0000153!1.17e-20!129;UBERON:0007811!1.17e-20!129;UBERON:0004121!5.97e-17!169;UBERON:0000924!2.73e-16!173;UBERON:0006601!2.73e-16!173;UBERON:0000200!3.11e-15!6;UBERON:0002021!4.12e-13!5;UBERON:0000025!1.46e-12!194;UBERON:0000483!1.56e-11!309;UBERON:0004111!2.61e-11!241;UBERON:0000119!2.75e-11!312;UBERON:0001871!1.54e-10!7;UBERON:0000477!4.35e-10!286;UBERON:0001872!6.70e-09!5;UBERON:0002420!8.57e-09!9;UBERON:0007245!8.57e-09!9;UBERON:0010009!8.57e-09!9;UBERON:0010011!8.57e-09!9;UBERON:0000454!8.57e-09!9;UBERON:0002308!8.82e-09!9;UBERON:0000125!8.82e-09!9;UBERON:0000064!2.41e-08!219;UBERON:0009663!2.98e-08!7;UBERON:0000475!4.43e-08!365;UBERON:0002771!6.51e-08!3;UBERON:0002298!1.78e-07!8;UBERON:0004733!3.87e-07!12;UBERON:0002028!3.87e-07!12;UBERON:0007277!3.87e-07!12;UBERON:0000481!7.25e-07!347|ontology_enrichment_uberon_v019=UBERON:0001950;3.16e-35;20!UBERON:0002619;3.84e-32;22!UBERON:0000956;2.11e-28;25!UBERON:0000203;2.11e-28;25!UBERON:0001893;2.47e-26;34!UBERON:0001869;3.89e-26;32!UBERON:0000200;1.19e-23;6!UBERON:0001870;1.51e-21;3!UBERON:0002791;4.61e-21;32!UBERON:0003528;7.51e-21;34!UBERON:0002020;7.51e-21;34!UBERON:0000073;1.02e-19;53!UBERON:0002616;1.02e-19;53!UBERON:0002780;2.56e-19;41!UBERON:0001890;2.56e-19;41!UBERON:0002581;1.41e-16;1!UBERON:0002902;1.41e-16;1!UBERON:0001136;1.41e-16;1!UBERON:0001343;1.41e-16;1!UBERON:0009899;1.41e-16;1!UBERON:0004910;1.41e-16;1!UBERON:0004813;1.41e-16;1!UBERON:0007190;1.41e-16;1!UBERON:0000955;3.78e-14;68!UBERON:0001872;2.44e-13;5!UBERON:0002021;3.65e-13;5!UBERON:0001017;3.75e-12;75!UBERON:0004733;4.69e-12;12!UBERON:0002028;4.69e-12;12!UBERON:0004732;3.56e-11;13!UBERON:0002037;3.95e-11;6!UBERON:0001016;1.06e-09;83!UBERON:0002702;3.57e-09;2!UBERON:0001897;5.93e-09;2!UBERON:0004909;5.93e-09;2!UBERON:0010225;5.93e-09;2!UBERON:0007023;2.38e-08;114!UBERON:0002680;1.02e-07;9!UBERON:0001895;1.02e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-39,53;UBERON:0002616,1.73e-39,53;UBERON:0001049,2.30e-37,56;UBERON:0005068,2.30e-37,56;UBERON:0006241,2.30e-37,56;UBERON:0007135,2.30e-37,56;UBERON:0001950,4.32e-35,20;UBERON:0002619,5.10e-32,22;UBERON:0000955,2.89e-30,68;UBERON:0006238,2.89e-30,68;UBERON:0001869,5.95e-29,32;UBERON:0002780,1.09e-28,41;UBERON:0001890,1.09e-28,41;UBERON:0003080,1.09e-28,41;UBERON:0006240,1.09e-28,41;UBERON:0000956,2.71e-28,25;UBERON:0000203,2.71e-28,25;UBERON:0001893,2.85e-27,34;UBERON:0001017,2.21e-25,81;UBERON:0003075,2.21e-25,82;UBERON:0007284,2.21e-25,82;UBERON:0002346,3.59e-24,86;UBERON:0000200,1.07e-23,6;UBERON:0001016,8.33e-23,89;UBERON:0002791,3.15e-22,32;UBERON:0001870,2.17e-21,3;UBERON:0003528,6.13e-21,34;UBERON:0002020,6.13e-21,34;UBERON:0010371,7.34e-20,104;UBERON:0003056,3.23e-19,61;UBERON:0007023,3.26e-18,114;UBERON:0001136,7.57e-17,1;UBERON:0001343,7.57e-17,1;UBERON:0004910,7.57e-17,1;UBERON:0005154,7.57e-17,1;UBERON:0005295,7.57e-17,1;UBERON:0004813,7.57e-17,1;UBERON:0005297,7.57e-17,1;UBERON:0005294,7.57e-17,1;UBERON:0010141,7.57e-17,1;UBERON:0005891,7.57e-17,1;UBERON:0007190,1.04e-16,1;UBERON:0002581,1.65e-16,1;UBERON:0002902,3.07e-16,1;UBERON:0009899,3.07e-16,1;UBERON:0010314,1.84e-15,132;UBERON:0001872,2.68e-13,5;UBERON:0002021,4.13e-13,5;UBERON:0004733,5.67e-12,12;UBERON:0002028,5.67e-12,12;UBERON:0007277,5.67e-12,12;UBERON:0004121,1.47e-11,171;UBERON:0000924,1.47e-11,171;UBERON:0006601,1.47e-11,171;UBERON:0004732,4.24e-11,13;UBERON:0002037,4.37e-11,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=376267 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20150 | |||
|TSSclassifier=S | |||
|UniProt=P59190 | |||
|association_with_transcript=71bp_to_ENST00000267512,NM_198686,uc001xhz.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_RAB15_5end | |||
|id=chr14:65438792..65438803,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.41e-16;1!CL:0002625;1.41e-16;1!CL:0000216;1.41e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,7.57e-17,1;CL:0002625,7.57e-17,1;CL:0000216,7.57e-17,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.95e-21;3!UBERON:0006601;2.79e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p13@RAB15 | |||
}} |
Revision as of 05:10, 11 September 2013
Short description: | p13@RAB15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_RAB15_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 71bp_to_ENST00000267512, NM_198686, uc001xhz.2_5end |
EntrezGene: | RAB15 |
HGNC: | 20150 |
UniProt: | P59190 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 7.57e-17 | 1 |
seminiferous tubule epithelial cell | 7.57e-17 | 1 |
Sertoli cell | 7.57e-17 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.