FFCP PHASE1:Hg19::chr19:8478159..8478220,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28038 | |||
|TSSclassifier=S | |||
|UniProt=Q9P0N8 | |||
|association_with_transcript=0bp_to_ENST00000215555,ENST00000381035,ENST00000393944,NM_001005415,NM_001005416,NM_016496,uc002mjv.2,uc002mjw.2,uc002mjx.2_5end | |||
|description=CAGE_peak_1_at_MARCH2_5end | |||
|id=chr19:8478159..8478220,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.76e-13!70;CL:0000766!3.31e-12!76;CL:0002009!3.53e-12!65;CL:0002194!3.80e-12!63;CL:0000576!3.80e-12!63;CL:0000040!3.80e-12!63;CL:0000559!3.80e-12!63;CL:0000557!3.87e-12!71;CL:0000115!3.81e-11!35;CL:0002057!4.88e-11!42;CL:0002078!1.62e-10!44;CL:0000860!1.93e-08!45;CL:0002139!6.72e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000115;9.51e-10;36!CL:0000473;5.57e-09;39!CL:0000234;5.57e-09;39!CL:0002078;3.65e-08;45!CL:0002139;7.08e-08;24!CL:0000576;9.55e-08;48!CL:0000860;2.81e-07;33!CL:0002057;2.81e-07;33!CL:1000449;7.16e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.36e-16,66;CL:0002194,1.16e-14,59;CL:0000576,1.16e-14,59;CL:0000040,1.16e-14,59;CL:0000559,1.16e-14,59;CL:0002009,1.21e-14,61;CL:0000557,1.86e-14,67;CL:0000766,1.98e-14,72;CL:0000473,2.23e-14,48;CL:0000234,2.23e-14,48;CL:0000115,1.22e-11,36;CL:0000860,4.88e-11,42;CL:0002057,4.88e-11,42;CL:0002078,5.55e-11,45;CL:0002139,6.72e-08,24;CL:1000449,7.12e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.94e-29!115;UBERON:0003081!9.56e-28!216;UBERON:0002193!2.55e-14!112;UBERON:0001009!4.40e-14!113;UBERON:0000025!1.28e-13!194;UBERON:0004535!8.29e-13!110;UBERON:0002390!2.61e-12!102;UBERON:0003061!2.61e-12!102;UBERON:0004111!7.52e-12!241;UBERON:0000055!5.56e-11!69;UBERON:0000468!6.42e-11!659;UBERON:0001049!9.33e-11!57;UBERON:0005068!9.33e-11!57;UBERON:0006241!9.33e-11!57;UBERON:0007135!9.33e-11!57;UBERON:0000467!1.46e-10!625;UBERON:0002405!1.53e-10!115;UBERON:0002049!1.73e-10!79;UBERON:0007798!1.73e-10!79;UBERON:0000480!2.47e-10!626;UBERON:0002371!2.71e-10!80;UBERON:0001981!8.58e-10!60;UBERON:0007500!8.58e-10!60;UBERON:0004537!8.58e-10!60;UBERON:0006965!8.58e-10!60;UBERON:0002204!8.81e-10!167;UBERON:0001893!9.66e-10!34;UBERON:0003075!1.10e-09!86;UBERON:0007284!1.10e-09!86;UBERON:0002020!1.26e-09!34;UBERON:0003528!1.26e-09!34;UBERON:0002616!1.72e-09!59;UBERON:0000477!1.73e-09!286;UBERON:0003080!2.10e-09!42;UBERON:0000923!2.44e-09!604;UBERON:0005291!2.44e-09!604;UBERON:0006598!2.44e-09!604;UBERON:0002532!2.44e-09!604;UBERON:0002791!2.89e-09!33;UBERON:0002050!2.92e-09!605;UBERON:0005423!2.92e-09!605;UBERON:0003914!3.75e-09!118;UBERON:0001869!3.93e-09!32;UBERON:0004872!5.16e-09!84;UBERON:0002780!5.64e-09!41;UBERON:0001890!5.64e-09!41;UBERON:0006240!5.64e-09!41;UBERON:0000922!7.12e-09!612;UBERON:0002346!2.85e-08!90;UBERON:0001474!9.27e-08!86;UBERON:0005743!1.38e-07!86;UBERON:0000483!1.74e-07!309;UBERON:0001017!2.10e-07!82;UBERON:0002619!2.11e-07!22;UBERON:0000119!2.30e-07!312;UBERON:0004765!2.43e-07!101;UBERON:0001434!2.43e-07!101;UBERON:0000955!2.60e-07!69;UBERON:0006238!2.60e-07!69;UBERON:0001950!4.64e-07!20;UBERON:0003056!6.20e-07!61;UBERON:0004876!7.53e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.36e-08;34!UBERON:0003528;3.06e-08;34!UBERON:0002020;3.06e-08;34!UBERON:0001869;3.08e-08;32!UBERON:0002791;4.68e-08;32!UBERON:0007023;4.98e-08;114!UBERON:0002619;2.33e-07;22!UBERON:0001950;4.90e-07;20!UBERON:0006555;7.16e-07;15!UBERON:0004819;7.16e-07;15!UBERON:0001285;7.16e-07;15!UBERON:0007684;7.16e-07;15!UBERON:0002780;8.93e-07;41!UBERON:0001890;8.93e-07;41 | |||
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| |||
|short_description=p1@MARCH2 | |||
}} |
Revision as of 23:01, 11 September 2013
Short description: | p1@MARCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MARCH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000215555, ENST00000381035, ENST00000393944, NM_001005415, NM_001005416, NM_016496, uc002mjv.2, uc002mjw.2, uc002mjx.2_5end |
EntrezGene: | MARCH2 |
HGNC: | 28038 |
UniProt: | Q9P0N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.36e-16 | 66 |
monopoietic cell | 1.16e-14 | 59 |
monocyte | 1.16e-14 | 59 |
monoblast | 1.16e-14 | 59 |
promonocyte | 1.16e-14 | 59 |
macrophage dendritic cell progenitor | 1.21e-14 | 61 |
granulocyte monocyte progenitor cell | 1.86e-14 | 67 |
myeloid leukocyte | 1.98e-14 | 72 |
defensive cell | 2.23e-14 | 48 |
phagocyte | 2.23e-14 | 48 |
endothelial cell | 1.22e-11 | 36 |
classical monocyte | 4.88e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-11 | 42 |
meso-epithelial cell | 5.55e-11 | 45 |
endothelial cell of vascular tree | 6.72e-08 | 24 |
epithelial cell of nephron | 7.12e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.