FFCP PHASE1:Hg19::chr22:43042678..43042692,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1727|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2873|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000466276_5end|coexpression_cluster_id=C357|description=CAGE_peak_3_at_CYB5R3_5end|id=chr22:43042678..43042692,-|ontology_enrichment_celltype=CL:0002078!8.62e-11!44;CL:0002139!6.72e-10!24;CL:0000115!2.74e-09!35|ontology_enrichment_celltype_v019=CL:0002139;2.64e-11;24!CL:0000115;6.86e-09;36!CL:0002078;7.72e-09;45!CL:0002138;3.54e-08;6|ontology_enrichment_celltype_v019_2=CL:0002078,9.22e-12,45;CL:0002139,2.48e-11,24;CL:0000115,1.31e-10,36;CL:0005020,3.25e-08,6;CL:0002138,3.25e-08,6;CL:0005022,3.25e-08,6|ontology_enrichment_development_v019=UBERON:0006601;4.17e-10;82!CL:0005022;3.54e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.34e-61!115;UBERON:0004111!2.23e-27!241;UBERON:0001049!1.14e-23!57;UBERON:0005068!1.14e-23!57;UBERON:0006241!1.14e-23!57;UBERON:0007135!1.14e-23!57;UBERON:0000025!1.21e-23!194;UBERON:0000477!1.08e-22!286;UBERON:0002616!1.93e-20!59;UBERON:0003080!9.70e-19!42;UBERON:0002780!5.60e-18!41;UBERON:0001890!5.60e-18!41;UBERON:0006240!5.60e-18!41;UBERON:0003075!7.49e-18!86;UBERON:0007284!7.49e-18!86;UBERON:0000955!7.54e-18!69;UBERON:0006238!7.54e-18!69;UBERON:0005743!1.92e-16!86;UBERON:0001017!5.57e-16!82;UBERON:0002346!6.03e-16!90;UBERON:0000073!1.34e-14!94;UBERON:0001016!1.34e-14!94;UBERON:0000483!2.27e-14!309;UBERON:0002020!2.72e-14!34;UBERON:0003528!2.72e-14!34;UBERON:0001893!2.79e-14!34;UBERON:0000119!4.94e-14!312;UBERON:0002791!8.93e-14!33;UBERON:0001869!5.04e-13!32;UBERON:0000468!2.82e-12!659;UBERON:0002619!3.25e-12!22;UBERON:0001950!2.56e-11!20;UBERON:0000467!3.21e-11!625;UBERON:0003056!3.28e-11!61;UBERON:0000480!4.54e-11!626;UBERON:0000064!4.90e-11!219;UBERON:0000475!9.02e-10!365;UBERON:0000956!1.03e-09!25;UBERON:0000203!1.03e-09!25;UBERON:0000153!2.58e-09!129;UBERON:0007811!2.58e-09!129;UBERON:0000033!1.33e-08!123;UBERON:0004121!3.75e-08!169;UBERON:0003914!4.21e-08!118;UBERON:0002465!6.39e-08!10;UBERON:0000481!8.38e-08!347;UBERON:0002417!8.72e-08!61;UBERON:0000916!8.72e-08!61;UBERON:0000924!2.07e-07!173;UBERON:0006601!2.07e-07!173;UBERON:0009569!2.23e-07!113;UBERON:0003103!3.09e-07!69;UBERON:0000062!4.01e-07!511;UBERON:0000479!5.78e-07!787;UBERON:0002298!7.23e-07!8;UBERON:0005172!8.22e-07!55;UBERON:0005173!8.22e-07!55|ontology_enrichment_uberon_v019=UBERON:0007023;4.62e-20;114!UBERON:0002780;1.52e-16;41!UBERON:0001890;1.52e-16;41!UBERON:0000073;1.30e-15;53!UBERON:0002616;1.30e-15;53!UBERON:0001893;4.32e-15;34!UBERON:0003528;8.40e-15;34!UBERON:0002020;8.40e-15;34!UBERON:0002791;1.44e-14;32!UBERON:0001869;2.29e-14;32!UBERON:0002619;1.31e-13;22!UBERON:0001950;2.25e-12;20!UBERON:0000956;2.62e-11;25!UBERON:0000203;2.62e-11;25!UBERON:0000955;1.37e-10;68!UBERON:0001017;4.87e-10;75!UBERON:0002465;2.78e-09;10!UBERON:0002420;2.14e-08;9!UBERON:0007245;2.14e-08;9!UBERON:0010009;2.14e-08;9!UBERON:0010011;2.14e-08;9!UBERON:0000454;2.14e-08;9!UBERON:0000125;3.34e-08;9!UBERON:0002308;3.34e-08;9!UBERON:0001016;6.28e-08;83!UBERON:0001473;1.63e-07;8!UBERON:0004536;1.63e-07;8!UBERON:0006558;1.63e-07;8!UBERON:0004732;5.71e-07;13!UBERON:0002298;6.36e-07;6!UBERON:0001894;7.86e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.17e-74,114;UBERON:0001049,7.02e-30,56;UBERON:0005068,7.02e-30,56;UBERON:0006241,7.02e-30,56;UBERON:0007135,7.02e-30,56;UBERON:0000073,8.41e-28,53;UBERON:0002616,8.41e-28,53;UBERON:0004111,1.93e-24,240;UBERON:0002780,5.59e-23,41;UBERON:0001890,5.59e-23,41;UBERON:0003080,5.59e-23,41;UBERON:0006240,5.59e-23,41;UBERON:0003075,2.40e-22,82;UBERON:0007284,2.40e-22,82;UBERON:0000955,3.49e-22,68;UBERON:0006238,3.49e-22,68;UBERON:0001017,2.21e-21,81;UBERON:0000025,6.00e-21,192;UBERON:0002346,1.71e-20,86;UBERON:0001016,9.63e-19,89;UBERON:0003528,9.36e-18,34;UBERON:0002020,9.36e-18,34;UBERON:0001893,9.66e-18,34;UBERON:0002791,3.28e-16,32;UBERON:0010314,4.54e-16,132;UBERON:0001869,5.55e-16,32;UBERON:0010371,1.78e-15,104;UBERON:0003056,7.68e-15,61;UBERON:0002619,1.21e-13,22;UBERON:0001950,2.28e-12,20;UBERON:0011216,2.02e-11,223;UBERON:0000956,2.44e-11,25;UBERON:0000203,2.44e-11,25;UBERON:0000483,5.27e-11,306;UBERON:0000119,1.23e-10,309;UBERON:0004121,1.59e-10,171;UBERON:0000924,1.59e-10,171;UBERON:0006601,1.59e-10,171;UBERON:0002465,2.75e-09,10;UBERON:0002420,1.90e-08,9;UBERON:0007245,1.90e-08,9;UBERON:0010009,1.90e-08,9;UBERON:0010011,1.90e-08,9;UBERON:0000454,1.90e-08,9;UBERON:0000125,2.53e-08,9;UBERON:0002308,2.53e-08,9;UBERON:0003076,4.77e-08,15;UBERON:0003057,4.77e-08,15;UBERON:0001473,1.51e-07,8;UBERON:0004536,1.51e-07,8;UBERON:0006558,1.51e-07,8;UBERON:0005423,2.58e-07,581;UBERON:0000922,3.35e-07,592;UBERON:0003103,3.37e-07,68;UBERON:0005631,3.61e-07,14;UBERON:0000158,3.61e-07,14;UBERON:0004732,4.47e-07,13;UBERON:0002298,5.20e-07,6;UBERON:0001894,6.93e-07,7;UBERON:0006222,6.93e-07,7|phase1_expression=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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2873 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000466276_5end | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_3_at_CYB5R3_5end | |||
|id=chr22:43042678..43042692,- | |||
|ontology_enrichment_celltype=CL:0002078!8.62e-11!44;CL:0002139!6.72e-10!24;CL:0000115!2.74e-09!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.64e-11;24!CL:0000115;6.86e-09;36!CL:0002078;7.72e-09;45!CL:0002138;3.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,9.22e-12,45;CL:0002139,2.48e-11,24;CL:0000115,1.31e-10,36;CL:0005020,3.25e-08,6;CL:0002138,3.25e-08,6;CL:0005022,3.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.17e-10;82!CL:0005022;3.54e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@CYB5R3 | |||
}} |
Revision as of 12:15, 12 September 2013
Short description: | p3@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CYB5R3_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 0bp_to_ENST00000466276_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 9.22e-12 | 45 |
endothelial cell of vascular tree | 2.48e-11 | 24 |
endothelial cell | 1.31e-10 | 36 |
lymphangioblast | 3.25e-08 | 6 |
endothelial cell of lymphatic vessel | 3.25e-08 | 6 |
vascular lymphangioblast | 3.25e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.