FFCP PHASE1:Mm9::chr11:4839712..4839727,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=602|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:4839712..4839727,-|id=chr11:4839712..4839727,-|ontology_enrichment_celltype=CL:0000117!3.99e-09!23;CL:0000337!3.99e-09!23;CL:0000540!9.42e-08!33;CL:0000047!9.42e-08!33;CL:0000031!9.42e-08!33;CL:0000404!9.42e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-12,23;CL:0000337,2.77e-12,23;CL:0002610,2.96e-08,3;CL:0002614,7.57e-08,3;CL:0000540,1.03e-07,33;CL:0000047,1.03e-07,33;CL:0000031,1.03e-07,33;CL:0000404,1.03e-07,33;CL:0002612,1.88e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.55e-18!75;UBERON:0001016!3.55e-18!75;UBERON:0001017!2.13e-17!73;UBERON:0005743!2.13e-17!73;UBERON:0002346!2.33e-16!71;UBERON:0003075!2.33e-16!71;UBERON:0007284!2.33e-16!71;UBERON:0007811!4.82e-16!86;UBERON:0001049!5.33e-16!52;UBERON:0005068!5.33e-16!52;UBERON:0006241!5.33e-16!52;UBERON:0007135!5.33e-16!52;UBERON:0000955!1.71e-14!50;UBERON:0006238!1.71e-14!50;UBERON:0004121!3.12e-14!102;UBERON:0000924!3.12e-14!102;UBERON:0006601!3.12e-14!102;UBERON:0002616!6.86e-14!49;UBERON:0000033!4.86e-13!63;UBERON:0000153!6.95e-13!94;UBERON:0002020!1.09e-12!34;UBERON:0003080!4.43e-10!40;UBERON:0003056!1.81e-09!49;UBERON:0002780!2.00e-09!39;UBERON:0001890!2.00e-09!39;UBERON:0006240!2.00e-09!39;UBERON:0002791!4.43e-09!29;UBERON:0003528!4.43e-09!29;UBERON:0001893!4.43e-09!29;UBERON:0002021!1.42e-08!10;UBERON:0000411!1.42e-08!10;UBERON:0001950!1.42e-08!10;UBERON:0003076!2.65e-07!12;UBERON:0003057!2.65e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-35,54;UBERON:0001049,1.13e-31,52;UBERON:0005068,1.13e-31,52;UBERON:0006241,1.13e-31,52;UBERON:0007135,1.13e-31,52;UBERON:0001017,5.09e-30,73;UBERON:0001016,5.27e-29,75;UBERON:0002346,2.24e-26,64;UBERON:0003075,2.24e-26,64;UBERON:0007284,2.24e-26,64;UBERON:0000955,7.28e-23,47;UBERON:0006238,7.28e-23,47;UBERON:0004121,8.32e-23,95;UBERON:0000924,8.32e-23,95;UBERON:0006601,8.32e-23,95;UBERON:0010371,3.34e-22,73;UBERON:0002616,1.54e-21,46;UBERON:0002020,6.70e-19,34;UBERON:0003076,1.30e-17,12;UBERON:0003057,1.30e-17,12;UBERON:0003080,8.96e-17,40;UBERON:0010314,4.44e-16,92;UBERON:0002021,8.15e-16,10;UBERON:0000411,8.15e-16,10;UBERON:0001950,8.15e-16,10;UBERON:0002780,2.46e-15,39;UBERON:0001890,2.46e-15,39;UBERON:0006240,2.46e-15,39;UBERON:0003056,2.16e-14,49;UBERON:0002240,7.67e-14,6;UBERON:0005174,7.67e-14,6;UBERON:0001137,7.67e-14,6;UBERON:0001948,1.25e-11,5;UBERON:0002315,1.25e-11,5;UBERON:0003528,2.04e-11,29;UBERON:0002791,2.04e-11,29;UBERON:0001893,2.04e-11,29;UBERON:0000025,1.64e-10,114;UBERON:0002619,1.68e-10,17;UBERON:0002950,7.73e-10,4;UBERON:0001891,7.73e-10,4;UBERON:0009616,7.73e-10,4;UBERON:0010286,7.73e-10,4;UBERON:0011216,1.01e-09,194;UBERON:0004111,2.33e-09,122;UBERON:0004684,2.96e-08,3;UBERON:0002275,2.96e-08,3;UBERON:0000956,4.01e-08,21;UBERON:0001869,4.01e-08,21;UBERON:0000203,4.01e-08,21;UBERON:0002038,7.57e-08,3;UBERON:0009663,7.57e-08,3;UBERON:0009661,7.57e-08,3;UBERON:0000125,7.57e-08,3;UBERON:0002308,7.57e-08,3;UBERON:0000483,1.57e-07,174;UBERON:0002257,1.88e-07,3;UBERON:0000119,2.35e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,1.40788722151667,1.17032263160997,1.02730780935303,1.11681022593471,0,0,0,0,0,0,0,0,0.595303031057488,0.794327609607082,0,0,0,0,0,0,0,0,0,1.90509202037889,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,15.996455126613,9.05561017901615,0,0.0958454710182364,0,15.4162233399144,35.369392649597,44.2386815777981,0.131886287730194,0.365950574409639,0.52091337055676,37.4105218661851,2.8138130501584,17.5717984943332,23.5702868378934,13.0981946335175,1.4911955666024,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0.484875253135222,0,2.92780797011547,2.09446706813455,0,0,0,0,5.69204429738326,1.37250180845588,0.251308704225729,0.695297280769106,1.79000820131231,7.2725815595846,5.51620294430376,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,10.9174401191699,14.7686725106176,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0.876767573733936,0,1.28528526568723,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,1.78368817602071,1.31639216481697,2.13125464380219,0,0,0,0,0,0,0,0,0,30.2243242277131,0.512612642393558,0,0,1.13021074202815,0,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.675824501963113,0.234714477291508,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0.381034033274999,0.604957110821043,0.194915761479505,0.577271049841977,0.701261413089414,0,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,3.43737308063638,2.749650917499,0.685082519770642,5.2877572817279,2.70009000092722,4.5032120322422,2.71885445390523,3.10656187051092,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.695305955669133,0.192909220463705,0,0.441596760403192,0.342869252385415,0.70990322463735,0,0.145346416632329,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0,0.382576664137687,0,0.231867835620421|short_description=p@chr11:4839712..4839727,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=602 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:4839712..4839727,- | |||
|id=chr11:4839712..4839727,- | |||
|ontology_enrichment_celltype=CL:0000117!3.99e-09!23;CL:0000337!3.99e-09!23;CL:0000540!9.42e-08!33;CL:0000047!9.42e-08!33;CL:0000031!9.42e-08!33;CL:0000404!9.42e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-12,23;CL:0000337,2.77e-12,23;CL:0002610,2.96e-08,3;CL:0002614,7.57e-08,3;CL:0000540,1.03e-07,33;CL:0000047,1.03e-07,33;CL:0000031,1.03e-07,33;CL:0000404,1.03e-07,33;CL:0002612,1.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.55e-18!75;UBERON:0001016!3.55e-18!75;UBERON:0001017!2.13e-17!73;UBERON:0005743!2.13e-17!73;UBERON:0002346!2.33e-16!71;UBERON:0003075!2.33e-16!71;UBERON:0007284!2.33e-16!71;UBERON:0007811!4.82e-16!86;UBERON:0001049!5.33e-16!52;UBERON:0005068!5.33e-16!52;UBERON:0006241!5.33e-16!52;UBERON:0007135!5.33e-16!52;UBERON:0000955!1.71e-14!50;UBERON:0006238!1.71e-14!50;UBERON:0004121!3.12e-14!102;UBERON:0000924!3.12e-14!102;UBERON:0006601!3.12e-14!102;UBERON:0002616!6.86e-14!49;UBERON:0000033!4.86e-13!63;UBERON:0000153!6.95e-13!94;UBERON:0002020!1.09e-12!34;UBERON:0003080!4.43e-10!40;UBERON:0003056!1.81e-09!49;UBERON:0002780!2.00e-09!39;UBERON:0001890!2.00e-09!39;UBERON:0006240!2.00e-09!39;UBERON:0002791!4.43e-09!29;UBERON:0003528!4.43e-09!29;UBERON:0001893!4.43e-09!29;UBERON:0002021!1.42e-08!10;UBERON:0000411!1.42e-08!10;UBERON:0001950!1.42e-08!10;UBERON:0003076!2.65e-07!12;UBERON:0003057!2.65e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-35,54;UBERON:0001049,1.13e-31,52;UBERON:0005068,1.13e-31,52;UBERON:0006241,1.13e-31,52;UBERON:0007135,1.13e-31,52;UBERON:0001017,5.09e-30,73;UBERON:0001016,5.27e-29,75;UBERON:0002346,2.24e-26,64;UBERON:0003075,2.24e-26,64;UBERON:0007284,2.24e-26,64;UBERON:0000955,7.28e-23,47;UBERON:0006238,7.28e-23,47;UBERON:0004121,8.32e-23,95;UBERON:0000924,8.32e-23,95;UBERON:0006601,8.32e-23,95;UBERON:0010371,3.34e-22,73;UBERON:0002616,1.54e-21,46;UBERON:0002020,6.70e-19,34;UBERON:0003076,1.30e-17,12;UBERON:0003057,1.30e-17,12;UBERON:0003080,8.96e-17,40;UBERON:0010314,4.44e-16,92;UBERON:0002021,8.15e-16,10;UBERON:0000411,8.15e-16,10;UBERON:0001950,8.15e-16,10;UBERON:0002780,2.46e-15,39;UBERON:0001890,2.46e-15,39;UBERON:0006240,2.46e-15,39;UBERON:0003056,2.16e-14,49;UBERON:0002240,7.67e-14,6;UBERON:0005174,7.67e-14,6;UBERON:0001137,7.67e-14,6;UBERON:0001948,1.25e-11,5;UBERON:0002315,1.25e-11,5;UBERON:0003528,2.04e-11,29;UBERON:0002791,2.04e-11,29;UBERON:0001893,2.04e-11,29;UBERON:0000025,1.64e-10,114;UBERON:0002619,1.68e-10,17;UBERON:0002950,7.73e-10,4;UBERON:0001891,7.73e-10,4;UBERON:0009616,7.73e-10,4;UBERON:0010286,7.73e-10,4;UBERON:0011216,1.01e-09,194;UBERON:0004111,2.33e-09,122;UBERON:0004684,2.96e-08,3;UBERON:0002275,2.96e-08,3;UBERON:0000956,4.01e-08,21;UBERON:0001869,4.01e-08,21;UBERON:0000203,4.01e-08,21;UBERON:0002038,7.57e-08,3;UBERON:0009663,7.57e-08,3;UBERON:0009661,7.57e-08,3;UBERON:0000125,7.57e-08,3;UBERON:0002308,7.57e-08,3;UBERON:0000483,1.57e-07,174;UBERON:0002257,1.88e-07,3;UBERON:0000119,2.35e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,1.40788722151667,1.17032263160997,1.02730780935303,1.11681022593471,0,0,0,0,0,0,0,0,0.595303031057488,0.794327609607082,0,0,0,0,0,0,0,0,0,1.90509202037889,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,15.996455126613,9.05561017901615,0,0.0958454710182364,0,15.4162233399144,35.369392649597,44.2386815777981,0.131886287730194,0.365950574409639,0.52091337055676,37.4105218661851,2.8138130501584,17.5717984943332,23.5702868378934,13.0981946335175,1.4911955666024,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0.484875253135222,0,2.92780797011547,2.09446706813455,0,0,0,0,5.69204429738326,1.37250180845588,0.251308704225729,0.695297280769106,1.79000820131231,7.2725815595846,5.51620294430376,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,10.9174401191699,14.7686725106176,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0.876767573733936,0,1.28528526568723,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,1.78368817602071,1.31639216481697,2.13125464380219,0,0,0,0,0,0,0,0,0,30.2243242277131,0.512612642393558,0,0,1.13021074202815,0,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.675824501963113,0.234714477291508,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0.381034033274999,0.604957110821043,0.194915761479505,0.577271049841977,0.701261413089414,0,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,3.43737308063638,2.749650917499,0.685082519770642,5.2877572817279,2.70009000092722,4.5032120322422,2.71885445390523,3.10656187051092,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.695305955669133,0.192909220463705,0,0.441596760403192,0.342869252385415,0.70990322463735,0,0.145346416632329,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr11:4839712..4839727,- | |||
}} |
Revision as of 19:45, 12 September 2013
Short description: | p@chr11:4839712..4839727, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:4839712..4839727, - |
Coexpression cluster: | MCL_coexpression_mm9:602 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.77e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.77e-12 | 23 |
raphe nuclei neuron | 2.96e-08 | 3 |
neuron of the substantia nigra | 7.57e-08 | 3 |
neuron | 1.03e-07 | 33 |
neuronal stem cell | 1.03e-07 | 33 |
neuroblast | 1.03e-07 | 33 |
electrically signaling cell | 1.03e-07 | 33 |
neuron of the ventral spinal cord | 1.88e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.