FFCP PHASE1:Hg19::chr3:131753848..131753897,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=131034|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2317|TSSclassifier=S|UniProt=Q96A23|association_with_transcript=-4bp_to_ENST00000429747,NM_130808_5end|description=CAGE_peak_1_at_CPNE4_5end|id=chr3:131753848..131753897,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,8.87e-08,8|ontology_enrichment_development_v019=UBERON:0006601;4.48e-10;82|ontology_enrichment_disease=DOID:3095!3.12e-07!22;DOID:2994!3.12e-07!22|ontology_enrichment_disease_v019=DOID:171;4.89e-08;10!DOID:3095;3.15e-07;22!DOID:2994;3.15e-07;22|ontology_enrichment_disease_v019_2=DOID:171,3.98e-08,10;DOID:3095,2.98e-07,22;DOID:2994,2.98e-07,22|ontology_enrichment_uberon=UBERON:0002346!2.35e-36!90;UBERON:0001049!3.47e-35!57;UBERON:0005068!3.47e-35!57;UBERON:0006241!3.47e-35!57;UBERON:0007135!3.47e-35!57;UBERON:0001017!8.61e-34!82;UBERON:0003075!5.43e-33!86;UBERON:0007284!5.43e-33!86;UBERON:0005743!6.25e-33!86;UBERON:0002780!5.27e-32!41;UBERON:0001890!5.27e-32!41;UBERON:0006240!5.27e-32!41;UBERON:0000073!1.71e-31!94;UBERON:0001016!1.71e-31!94;UBERON:0003080!9.76e-31!42;UBERON:0003056!5.09e-29!61;UBERON:0002616!3.43e-28!59;UBERON:0007023!5.04e-28!115;UBERON:0001893!4.12e-27!34;UBERON:0002020!5.59e-27!34;UBERON:0003528!5.59e-27!34;UBERON:0000955!1.95e-26!69;UBERON:0006238!1.95e-26!69;UBERON:0001869!2.00e-26!32;UBERON:0002791!2.82e-26!33;UBERON:0000924!2.79e-23!173;UBERON:0006601!2.79e-23!173;UBERON:0000956!1.49e-21!25;UBERON:0000203!1.49e-21!25;UBERON:0004121!7.49e-21!169;UBERON:0002619!5.33e-20!22;UBERON:0001950!1.92e-18!20;UBERON:0000153!3.73e-18!129;UBERON:0007811!3.73e-18!129;UBERON:0000033!6.56e-18!123;UBERON:0000064!3.15e-11!219;UBERON:0000922!1.75e-10!612;UBERON:0000483!9.40e-10!309;UBERON:0000481!1.03e-09!347;UBERON:0000119!1.63e-09!312;UBERON:0002050!6.45e-09!605;UBERON:0005423!6.45e-09!605;UBERON:0000923!1.10e-08!604;UBERON:0005291!1.10e-08!604;UBERON:0006598!1.10e-08!604;UBERON:0002532!1.10e-08!604;UBERON:0000475!1.13e-08!365;UBERON:0000025!2.83e-08!194;UBERON:0001871!9.80e-08!7;UBERON:0002420!4.36e-07!9;UBERON:0007245!4.36e-07!9;UBERON:0010009!4.36e-07!9;UBERON:0010011!4.36e-07!9;UBERON:0000454!4.36e-07!9;UBERON:0004111!4.70e-07!241;UBERON:0002308!6.49e-07!9;UBERON:0000125!6.49e-07!9|ontology_enrichment_uberon_v019=UBERON:0001869;3.29e-36;32!UBERON:0001893;1.58e-34;34!UBERON:0003528;2.51e-34;34!UBERON:0002020;2.51e-34;34!UBERON:0002791;6.52e-34;32!UBERON:0002780;2.12e-33;41!UBERON:0001890;2.12e-33;41!UBERON:0000956;2.18e-32;25!UBERON:0000203;2.18e-32;25!UBERON:0002619;5.11e-30;22!UBERON:0001950;1.31e-27;20!UBERON:0000073;8.40e-27;53!UBERON:0002616;8.40e-27;53!UBERON:0001017;1.41e-19;75!UBERON:0000955;5.63e-18;68!UBERON:0001016;1.23e-15;83!UBERON:0000922;1.70e-11;49!UBERON:0001871;8.33e-10;6!UBERON:0000200;2.37e-09;6!UBERON:0001894;7.97e-09;7!UBERON:0002420;1.09e-08;9!UBERON:0007245;1.09e-08;9!UBERON:0010009;1.09e-08;9!UBERON:0010011;1.09e-08;9!UBERON:0000454;1.09e-08;9!UBERON:0000125;1.97e-08;9!UBERON:0002308;1.97e-08;9!UBERON:0002021;5.30e-08;5!UBERON:0007023;5.60e-08;114!UBERON:0001872;7.24e-08;5!UBERON:0000349;1.73e-07;5!UBERON:0002050;1.94e-07;5!UBERON:0005423;1.94e-07;5!UBERON:0011216;2.65e-07;132!UBERON:0002346;5.24e-07;4!UBERON:0000923;5.24e-07;4!UBERON:0010316;5.24e-07;4!UBERON:0005291;5.24e-07;4!UBERON:0002298;9.33e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.81e-51,56;UBERON:0005068,1.81e-51,56;UBERON:0006241,1.81e-51,56;UBERON:0007135,1.81e-51,56;UBERON:0001017,1.51e-50,81;UBERON:0002346,3.86e-49,86;UBERON:0001016,2.66e-48,89;UBERON:0000073,2.72e-48,53;UBERON:0002616,2.72e-48,53;UBERON:0002780,5.41e-47,41;UBERON:0001890,5.41e-47,41;UBERON:0003080,5.41e-47,41;UBERON:0006240,5.41e-47,41;UBERON:0003075,4.38e-44,82;UBERON:0007284,4.38e-44,82;UBERON:0003056,3.41e-43,61;UBERON:0000955,1.50e-40,68;UBERON:0006238,1.50e-40,68;UBERON:0001869,5.93e-40,32;UBERON:0001893,2.04e-39,34;UBERON:0003528,3.25e-39,34;UBERON:0002020,3.25e-39,34;UBERON:0002791,4.25e-37,32;UBERON:0010371,1.25e-32,104;UBERON:0000956,2.06e-32,25;UBERON:0000203,2.06e-32,25;UBERON:0004121,2.32e-32,171;UBERON:0000924,2.32e-32,171;UBERON:0006601,2.32e-32,171;UBERON:0002619,5.24e-30,22;UBERON:0001950,1.34e-27,20;UBERON:0007023,2.48e-25,114;UBERON:0011216,2.84e-25,223;UBERON:0010314,9.38e-25,132;UBERON:0000025,3.06e-13,192;UBERON:0004111,6.49e-11,240;UBERON:0001871,8.43e-10,6;UBERON:0000200,2.35e-09,6;UBERON:0001894,7.82e-09,7;UBERON:0006222,7.82e-09,7;UBERON:0002420,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9;UBERON:0000483,1.15e-08,306;UBERON:0000125,1.97e-08,9;UBERON:0002308,1.97e-08,9;UBERON:0000922,2.08e-08,592;UBERON:0000119,2.27e-08,309;UBERON:0002021,5.32e-08,5;UBERON:0001872,7.27e-08,5;UBERON:0005423,9.88e-08,581;UBERON:0000349,1.75e-07,5;UBERON:0003076,3.17e-07,15;UBERON:0003057,3.17e-07,15;UBERON:0002298,8.95e-07,6|phase1_expression=0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=131034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2317 | |||
|TSSclassifier=S | |||
|UniProt=Q96A23 | |||
|association_with_transcript=-4bp_to_ENST00000429747,NM_130808_5end | |||
|description=CAGE_peak_1_at_CPNE4_5end | |||
|id=chr3:131753848..131753897,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.87e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.48e-10;82 | |||
|ontology_enrichment_disease=DOID:3095!3.12e-07!22;DOID:2994!3.12e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;4.89e-08;10!DOID:3095;3.15e-07;22!DOID:2994;3.15e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.98e-08,10;DOID:3095,2.98e-07,22;DOID:2994,2.98e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.35e-36!90;UBERON:0001049!3.47e-35!57;UBERON:0005068!3.47e-35!57;UBERON:0006241!3.47e-35!57;UBERON:0007135!3.47e-35!57;UBERON:0001017!8.61e-34!82;UBERON:0003075!5.43e-33!86;UBERON:0007284!5.43e-33!86;UBERON:0005743!6.25e-33!86;UBERON:0002780!5.27e-32!41;UBERON:0001890!5.27e-32!41;UBERON:0006240!5.27e-32!41;UBERON:0000073!1.71e-31!94;UBERON:0001016!1.71e-31!94;UBERON:0003080!9.76e-31!42;UBERON:0003056!5.09e-29!61;UBERON:0002616!3.43e-28!59;UBERON:0007023!5.04e-28!115;UBERON:0001893!4.12e-27!34;UBERON:0002020!5.59e-27!34;UBERON:0003528!5.59e-27!34;UBERON:0000955!1.95e-26!69;UBERON:0006238!1.95e-26!69;UBERON:0001869!2.00e-26!32;UBERON:0002791!2.82e-26!33;UBERON:0000924!2.79e-23!173;UBERON:0006601!2.79e-23!173;UBERON:0000956!1.49e-21!25;UBERON:0000203!1.49e-21!25;UBERON:0004121!7.49e-21!169;UBERON:0002619!5.33e-20!22;UBERON:0001950!1.92e-18!20;UBERON:0000153!3.73e-18!129;UBERON:0007811!3.73e-18!129;UBERON:0000033!6.56e-18!123;UBERON:0000064!3.15e-11!219;UBERON:0000922!1.75e-10!612;UBERON:0000483!9.40e-10!309;UBERON:0000481!1.03e-09!347;UBERON:0000119!1.63e-09!312;UBERON:0002050!6.45e-09!605;UBERON:0005423!6.45e-09!605;UBERON:0000923!1.10e-08!604;UBERON:0005291!1.10e-08!604;UBERON:0006598!1.10e-08!604;UBERON:0002532!1.10e-08!604;UBERON:0000475!1.13e-08!365;UBERON:0000025!2.83e-08!194;UBERON:0001871!9.80e-08!7;UBERON:0002420!4.36e-07!9;UBERON:0007245!4.36e-07!9;UBERON:0010009!4.36e-07!9;UBERON:0010011!4.36e-07!9;UBERON:0000454!4.36e-07!9;UBERON:0004111!4.70e-07!241;UBERON:0002308!6.49e-07!9;UBERON:0000125!6.49e-07!9 | |||
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| |||
|short_description=p1@CPNE4 | |||
}} |
Revision as of 21:34, 12 September 2013
Short description: | p1@CPNE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CPNE4_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000429747, NM_130808_5end |
EntrezGene: | CPNE4 |
HGNC: | 2317 |
UniProt: | Q96A23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.87e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.98e-08 | 10 |
germ cell and embryonal cancer | 2.98e-07 | 22 |
germ cell cancer | 2.98e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.