FFCP PHASE1:Mm9::chr12:73313270..73313283,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1329|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:73313270..73313283,+|id=chr12:73313270..73313283,+|ontology_enrichment_celltype=CL:0000117!9.75e-19!23;CL:0000337!9.75e-19!23;CL:0000540!2.39e-12!33;CL:0000047!2.39e-12!33;CL:0000031!2.39e-12!33;CL:0000404!2.39e-12!33;CL:0000221!3.81e-11!44;CL:0000133!3.81e-11!44;CL:0002319!1.47e-10!43;CL:0000393!4.93e-09!39;CL:0000211!4.93e-09!39;CL:0000055!1.04e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.66e-35,23;CL:0000337,3.66e-35,23;CL:0000540,6.39e-23,33;CL:0000047,6.39e-23,33;CL:0000031,6.39e-23,33;CL:0000404,6.39e-23,33;CL:0000221,2.44e-19,44;CL:0000133,2.44e-19,44;CL:0000393,1.34e-18,39;CL:0000211,1.34e-18,39;CL:0002319,4.35e-18,43;CL:0002321,4.00e-10,70;CL:0002614,5.55e-08,3;CL:0002612,1.08e-07,3;CL:0000120,1.70e-07,3;CL:0002613,2.80e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.40e-31!71;UBERON:0003075!7.40e-31!71;UBERON:0007284!7.40e-31!71;UBERON:0001049!3.36e-27!52;UBERON:0005068!3.36e-27!52;UBERON:0006241!3.36e-27!52;UBERON:0007135!3.36e-27!52;UBERON:0000033!1.06e-26!63;UBERON:0004121!1.74e-26!102;UBERON:0000924!1.74e-26!102;UBERON:0006601!1.74e-26!102;UBERON:0000073!9.50e-26!75;UBERON:0001016!9.50e-26!75;UBERON:0001017!3.80e-25!73;UBERON:0005743!3.80e-25!73;UBERON:0002020!3.83e-25!34;UBERON:0000955!1.17e-23!50;UBERON:0006238!1.17e-23!50;UBERON:0002616!6.24e-23!49;UBERON:0003056!6.82e-23!49;UBERON:0002791!2.51e-20!29;UBERON:0003528!2.51e-20!29;UBERON:0001893!2.51e-20!29;UBERON:0003080!5.83e-20!40;UBERON:0002780!3.10e-19!39;UBERON:0001890!3.10e-19!39;UBERON:0006240!3.10e-19!39;UBERON:0007811!5.38e-15!86;UBERON:0000956!1.54e-13!21;UBERON:0001869!1.54e-13!21;UBERON:0000203!1.54e-13!21;UBERON:0000153!3.49e-12!94;UBERON:0002619!2.77e-10!17;UBERON:0002021!2.03e-09!10;UBERON:0000411!2.03e-09!10;UBERON:0001950!2.03e-09!10;UBERON:0002420!4.45e-08!8;UBERON:0007245!4.45e-08!8;UBERON:0010009!4.45e-08!8;UBERON:0010011!4.45e-08!8;UBERON:0000454!4.45e-08!8;UBERON:0003076!1.02e-07!12;UBERON:0003057!1.02e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.06e-42,34;UBERON:0000073,1.50e-37,54;UBERON:0001017,6.81e-36,73;UBERON:0001016,1.03e-34,75;UBERON:0001049,2.81e-34,52;UBERON:0005068,2.81e-34,52;UBERON:0006241,2.81e-34,52;UBERON:0007135,2.81e-34,52;UBERON:0003528,4.88e-32,29;UBERON:0002791,4.88e-32,29;UBERON:0001893,4.88e-32,29;UBERON:0004121,7.25e-29,95;UBERON:0000924,7.25e-29,95;UBERON:0006601,7.25e-29,95;UBERON:0003080,1.30e-28,40;UBERON:0002346,2.68e-28,64;UBERON:0003075,2.68e-28,64;UBERON:0007284,2.68e-28,64;UBERON:0000955,1.71e-27,47;UBERON:0006238,1.71e-27,47;UBERON:0002780,3.94e-27,39;UBERON:0001890,3.94e-27,39;UBERON:0006240,3.94e-27,39;UBERON:0002616,4.14e-26,46;UBERON:0010371,1.46e-25,73;UBERON:0003056,4.31e-24,49;UBERON:0010314,5.26e-20,92;UBERON:0000956,8.01e-20,21;UBERON:0001869,8.01e-20,21;UBERON:0000203,8.01e-20,21;UBERON:0002021,2.36e-16,10;UBERON:0000411,2.36e-16,10;UBERON:0001950,2.36e-16,10;UBERON:0002420,1.42e-13,8;UBERON:0007245,1.42e-13,8;UBERON:0010009,1.42e-13,8;UBERON:0010011,1.42e-13,8;UBERON:0000454,1.42e-13,8;UBERON:0002619,3.97e-13,17;UBERON:0001948,7.15e-12,5;UBERON:0002315,7.15e-12,5;UBERON:0000025,1.38e-11,114;UBERON:0004111,2.98e-11,122;UBERON:0002240,8.21e-10,6;UBERON:0005174,8.21e-10,6;UBERON:0001137,8.21e-10,6;UBERON:0002950,1.82e-09,4;UBERON:0001891,1.82e-09,4;UBERON:0009616,1.82e-09,4;UBERON:0010286,1.82e-09,4;UBERON:0011216,5.67e-09,194;UBERON:0002038,5.55e-08,3;UBERON:0009663,5.55e-08,3;UBERON:0009661,5.55e-08,3;UBERON:0000125,5.55e-08,3;UBERON:0002308,5.55e-08,3;UBERON:0002257,1.08e-07,3;UBERON:0000369,1.94e-07,5;UBERON:0002435,1.94e-07,5;UBERON:0000204,1.94e-07,5;UBERON:0010082,1.94e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,7.40587370980846,3.1691570175309,0,0,0,0,0,0,1.15265491596466,1.97010263386108,4.99521971827255,2.73422449756797,3.99911378165325,4.41737081903227,2.08234358665422,0.766763768145891,0.919218786610021,0,2.42605942361857,1.68967186581868,2.50583946687368,2.47016637726506,4.16730696445408,4.74611098302348,6.19038871034848,3.36156145108982,5.30331453852602,2.27794689278565,4.84638559145781,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0,1.04091196059682,0.913396434936424,0.691846491768175,0.904335843315735,0.23517741427141,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.49790639404823,0.457500602818626,3.8952849154988,2.43354048269187,2.81287003063364,1.66230435647648,3.56930778749067,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.753524089178575,0.408218994907967,1.15302348256365,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1329 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:73313270..73313283,+ | |||
|id=chr12:73313270..73313283,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.75e-19!23;CL:0000337!9.75e-19!23;CL:0000540!2.39e-12!33;CL:0000047!2.39e-12!33;CL:0000031!2.39e-12!33;CL:0000404!2.39e-12!33;CL:0000221!3.81e-11!44;CL:0000133!3.81e-11!44;CL:0002319!1.47e-10!43;CL:0000393!4.93e-09!39;CL:0000211!4.93e-09!39;CL:0000055!1.04e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.66e-35,23;CL:0000337,3.66e-35,23;CL:0000540,6.39e-23,33;CL:0000047,6.39e-23,33;CL:0000031,6.39e-23,33;CL:0000404,6.39e-23,33;CL:0000221,2.44e-19,44;CL:0000133,2.44e-19,44;CL:0000393,1.34e-18,39;CL:0000211,1.34e-18,39;CL:0002319,4.35e-18,43;CL:0002321,4.00e-10,70;CL:0002614,5.55e-08,3;CL:0002612,1.08e-07,3;CL:0000120,1.70e-07,3;CL:0002613,2.80e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.40e-31!71;UBERON:0003075!7.40e-31!71;UBERON:0007284!7.40e-31!71;UBERON:0001049!3.36e-27!52;UBERON:0005068!3.36e-27!52;UBERON:0006241!3.36e-27!52;UBERON:0007135!3.36e-27!52;UBERON:0000033!1.06e-26!63;UBERON:0004121!1.74e-26!102;UBERON:0000924!1.74e-26!102;UBERON:0006601!1.74e-26!102;UBERON:0000073!9.50e-26!75;UBERON:0001016!9.50e-26!75;UBERON:0001017!3.80e-25!73;UBERON:0005743!3.80e-25!73;UBERON:0002020!3.83e-25!34;UBERON:0000955!1.17e-23!50;UBERON:0006238!1.17e-23!50;UBERON:0002616!6.24e-23!49;UBERON:0003056!6.82e-23!49;UBERON:0002791!2.51e-20!29;UBERON:0003528!2.51e-20!29;UBERON:0001893!2.51e-20!29;UBERON:0003080!5.83e-20!40;UBERON:0002780!3.10e-19!39;UBERON:0001890!3.10e-19!39;UBERON:0006240!3.10e-19!39;UBERON:0007811!5.38e-15!86;UBERON:0000956!1.54e-13!21;UBERON:0001869!1.54e-13!21;UBERON:0000203!1.54e-13!21;UBERON:0000153!3.49e-12!94;UBERON:0002619!2.77e-10!17;UBERON:0002021!2.03e-09!10;UBERON:0000411!2.03e-09!10;UBERON:0001950!2.03e-09!10;UBERON:0002420!4.45e-08!8;UBERON:0007245!4.45e-08!8;UBERON:0010009!4.45e-08!8;UBERON:0010011!4.45e-08!8;UBERON:0000454!4.45e-08!8;UBERON:0003076!1.02e-07!12;UBERON:0003057!1.02e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.06e-42,34;UBERON:0000073,1.50e-37,54;UBERON:0001017,6.81e-36,73;UBERON:0001016,1.03e-34,75;UBERON:0001049,2.81e-34,52;UBERON:0005068,2.81e-34,52;UBERON:0006241,2.81e-34,52;UBERON:0007135,2.81e-34,52;UBERON:0003528,4.88e-32,29;UBERON:0002791,4.88e-32,29;UBERON:0001893,4.88e-32,29;UBERON:0004121,7.25e-29,95;UBERON:0000924,7.25e-29,95;UBERON:0006601,7.25e-29,95;UBERON:0003080,1.30e-28,40;UBERON:0002346,2.68e-28,64;UBERON:0003075,2.68e-28,64;UBERON:0007284,2.68e-28,64;UBERON:0000955,1.71e-27,47;UBERON:0006238,1.71e-27,47;UBERON:0002780,3.94e-27,39;UBERON:0001890,3.94e-27,39;UBERON:0006240,3.94e-27,39;UBERON:0002616,4.14e-26,46;UBERON:0010371,1.46e-25,73;UBERON:0003056,4.31e-24,49;UBERON:0010314,5.26e-20,92;UBERON:0000956,8.01e-20,21;UBERON:0001869,8.01e-20,21;UBERON:0000203,8.01e-20,21;UBERON:0002021,2.36e-16,10;UBERON:0000411,2.36e-16,10;UBERON:0001950,2.36e-16,10;UBERON:0002420,1.42e-13,8;UBERON:0007245,1.42e-13,8;UBERON:0010009,1.42e-13,8;UBERON:0010011,1.42e-13,8;UBERON:0000454,1.42e-13,8;UBERON:0002619,3.97e-13,17;UBERON:0001948,7.15e-12,5;UBERON:0002315,7.15e-12,5;UBERON:0000025,1.38e-11,114;UBERON:0004111,2.98e-11,122;UBERON:0002240,8.21e-10,6;UBERON:0005174,8.21e-10,6;UBERON:0001137,8.21e-10,6;UBERON:0002950,1.82e-09,4;UBERON:0001891,1.82e-09,4;UBERON:0009616,1.82e-09,4;UBERON:0010286,1.82e-09,4;UBERON:0011216,5.67e-09,194;UBERON:0002038,5.55e-08,3;UBERON:0009663,5.55e-08,3;UBERON:0009661,5.55e-08,3;UBERON:0000125,5.55e-08,3;UBERON:0002308,5.55e-08,3;UBERON:0002257,1.08e-07,3;UBERON:0000369,1.94e-07,5;UBERON:0002435,1.94e-07,5;UBERON:0000204,1.94e-07,5;UBERON:0010082,1.94e-07,5 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,7.40587370980846,3.1691570175309,0,0,0,0,0,0,1.15265491596466,1.97010263386108,4.99521971827255,2.73422449756797,3.99911378165325,4.41737081903227,2.08234358665422,0.766763768145891,0.919218786610021,0,2.42605942361857,1.68967186581868,2.50583946687368,2.47016637726506,4.16730696445408,4.74611098302348,6.19038871034848,3.36156145108982,5.30331453852602,2.27794689278565,4.84638559145781,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0,1.04091196059682,0.913396434936424,0.691846491768175,0.904335843315735,0.23517741427141,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.49790639404823,0.457500602818626,3.8952849154988,2.43354048269187,2.81287003063364,1.66230435647648,3.56930778749067,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.753524089178575,0.408218994907967,1.15302348256365,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.54356918568927,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.963303539926752,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.76195141904306,2.86447756719698,11.6860163993708,2.74033007908257,0.755393897389701,4.05013500139084,2.70192721934532,2.26571204492102,1.55328093525546,0.31136204275253,0,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0,0,0.468207537349412,0.128050304809739,0.114870937911227,0,0.115884325944855,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0,0.476872379894642,0.872078499793971,0.376437521661322,0.676916863133412,0.182927972872773,0.263069711437843,0.814824683075171,0.561142271657738,0.118635018124174,0.689531376628944,0.818462086339379,0.154936841185966,0.385813221962283,2.74791635731741,0.701794825336225,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr12:73313270..73313283,+ | |||
}} |
Revision as of 23:07, 12 September 2013
Short description: | p@chr12:73313270..73313283, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:73313270..73313283, + |
Coexpression cluster: | MCL_coexpression_mm9:1329 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.66e-35 | 23 |
neuroblast (sensu Vertebrata) | 3.66e-35 | 23 |
neuron | 6.39e-23 | 33 |
neuronal stem cell | 6.39e-23 | 33 |
neuroblast | 6.39e-23 | 33 |
electrically signaling cell | 6.39e-23 | 33 |
ectodermal cell | 2.44e-19 | 44 |
neurectodermal cell | 2.44e-19 | 44 |
electrically responsive cell | 1.34e-18 | 39 |
electrically active cell | 1.34e-18 | 39 |
neural cell | 4.35e-18 | 43 |
embryonic cell | 4.00e-10 | 70 |
neuron of the substantia nigra | 5.55e-08 | 3 |
neuron of the ventral spinal cord | 1.08e-07 | 3 |
granule cell | 1.70e-07 | 3 |
striatum neuron | 2.80e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.