FFCP PHASE1:Mm9::chr18:64424692..64424721,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=90|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:64424692..64424721,+|id=chr18:64424692..64424721,+|ontology_enrichment_celltype=CL:0000117!4.10e-15!23;CL:0000337!4.10e-15!23;CL:0000540!1.16e-13!33;CL:0000047!1.16e-13!33;CL:0000031!1.16e-13!33;CL:0000404!1.16e-13!33;CL:0000393!5.64e-10!39;CL:0000211!5.64e-10!39;CL:0000221!6.27e-10!44;CL:0000133!6.27e-10!44;CL:0002319!1.93e-09!43;CL:0000055!8.93e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.38e-23,23;CL:0000337,4.38e-23,23;CL:0000540,1.82e-16,33;CL:0000047,1.82e-16,33;CL:0000031,1.82e-16,33;CL:0000404,1.82e-16,33;CL:0000393,3.65e-13,39;CL:0000211,3.65e-13,39;CL:0002319,1.75e-11,43;CL:0000221,4.11e-11,44;CL:0000133,4.11e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.63e-26!75;UBERON:0001016!1.63e-26!75;UBERON:0001017!5.64e-26!73;UBERON:0005743!5.64e-26!73;UBERON:0000033!8.72e-24!63;UBERON:0001049!8.82e-24!52;UBERON:0005068!8.82e-24!52;UBERON:0006241!8.82e-24!52;UBERON:0007135!8.82e-24!52;UBERON:0000955!2.43e-22!50;UBERON:0006238!2.43e-22!50;UBERON:0004121!4.06e-22!102;UBERON:0000924!4.06e-22!102;UBERON:0006601!4.06e-22!102;UBERON:0002346!5.29e-22!71;UBERON:0003075!5.29e-22!71;UBERON:0007284!5.29e-22!71;UBERON:0002020!1.81e-21!34;UBERON:0002616!1.91e-21!49;UBERON:0003056!4.87e-19!49;UBERON:0003080!1.07e-17!40;UBERON:0002791!1.43e-17!29;UBERON:0003528!1.43e-17!29;UBERON:0001893!1.43e-17!29;UBERON:0002780!4.87e-17!39;UBERON:0001890!4.87e-17!39;UBERON:0006240!4.87e-17!39;UBERON:0000956!1.74e-13!21;UBERON:0001869!1.74e-13!21;UBERON:0000203!1.74e-13!21;UBERON:0007811!2.59e-12!86;UBERON:0002619!1.34e-10!17;UBERON:0000153!8.38e-10!94;UBERON:0002021!2.92e-09!10;UBERON:0000411!2.92e-09!10;UBERON:0001950!2.92e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-45,54;UBERON:0001017,7.54e-44,73;UBERON:0001016,2.08e-42,75;UBERON:0001049,2.65e-42,52;UBERON:0005068,2.65e-42,52;UBERON:0006241,2.65e-42,52;UBERON:0007135,2.65e-42,52;UBERON:0002020,1.88e-37,34;UBERON:0000955,1.24e-34,47;UBERON:0006238,1.24e-34,47;UBERON:0002346,1.32e-34,64;UBERON:0003075,1.32e-34,64;UBERON:0007284,1.32e-34,64;UBERON:0004121,5.38e-33,95;UBERON:0000924,5.38e-33,95;UBERON:0006601,5.38e-33,95;UBERON:0002616,6.81e-33,46;UBERON:0010371,4.77e-31,73;UBERON:0003528,1.63e-29,29;UBERON:0002791,1.63e-29,29;UBERON:0001893,1.63e-29,29;UBERON:0003080,8.42e-29,40;UBERON:0002780,1.70e-27,39;UBERON:0001890,1.70e-27,39;UBERON:0006240,1.70e-27,39;UBERON:0003056,5.54e-24,49;UBERON:0000956,1.06e-22,21;UBERON:0001869,1.06e-22,21;UBERON:0000203,1.06e-22,21;UBERON:0010314,1.17e-22,92;UBERON:0002021,1.29e-17,10;UBERON:0000411,1.29e-17,10;UBERON:0001950,1.29e-17,10;UBERON:0002619,7.55e-17,17;UBERON:0000025,2.91e-14,114;UBERON:0004111,9.69e-14,122;UBERON:0003076,1.77e-13,12;UBERON:0003057,1.77e-13,12;UBERON:0011216,8.97e-11,194;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0001948,4.07e-09,5;UBERON:0002315,4.07e-09,5;UBERON:0002420,7.25e-08,8;UBERON:0007245,7.25e-08,8;UBERON:0010009,7.25e-08,8;UBERON:0010011,7.25e-08,8;UBERON:0000454,7.25e-08,8;UBERON:0000483,1.57e-07,174;UBERON:0000119,2.44e-07,176|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.319984845586813,0,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,1.89008313664367,1.89292465216244,3.14216082844184,1.32521124570968,2.44981598429908,0.862609239164127,0.919218786610021,3.30347642998166,2.042997409363,2.15049146558741,0.791317726381163,1.28082701043374,1.56274011167028,1.3959149950069,0,2.75036845998258,4.12480019663135,2.84743361598206,1.67759501242771,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.693941307064543,0.913396434936424,0,0,0,0,0,0,0,0,0,0,0,5.27005434620785,1.8850203613211,0,0,0,0,1.49790639404823,62.6775825861518,12.3141265070607,8.51739168942155,8.43861009190091,7.06479351502504,23.6872244078926,0,0,0,0.420883711772948,0,0,0.540186389416048,0.452114453507145,0.136072998302656,0.512454881139399,0.468508622798644,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8276868624118,8.33527360272204,0.660837565967596,0,0.639864751605702,0.928946687441754,1.03093969057675,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0,0.575392274901621,0.648540907100142,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.28932855251423,0,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.395287777946524,4.81981974632711,0,0,0,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:64424692..64424721,+ | |||
|id=chr18:64424692..64424721,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.10e-15!23;CL:0000337!4.10e-15!23;CL:0000540!1.16e-13!33;CL:0000047!1.16e-13!33;CL:0000031!1.16e-13!33;CL:0000404!1.16e-13!33;CL:0000393!5.64e-10!39;CL:0000211!5.64e-10!39;CL:0000221!6.27e-10!44;CL:0000133!6.27e-10!44;CL:0002319!1.93e-09!43;CL:0000055!8.93e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.38e-23,23;CL:0000337,4.38e-23,23;CL:0000540,1.82e-16,33;CL:0000047,1.82e-16,33;CL:0000031,1.82e-16,33;CL:0000404,1.82e-16,33;CL:0000393,3.65e-13,39;CL:0000211,3.65e-13,39;CL:0002319,1.75e-11,43;CL:0000221,4.11e-11,44;CL:0000133,4.11e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.63e-26!75;UBERON:0001016!1.63e-26!75;UBERON:0001017!5.64e-26!73;UBERON:0005743!5.64e-26!73;UBERON:0000033!8.72e-24!63;UBERON:0001049!8.82e-24!52;UBERON:0005068!8.82e-24!52;UBERON:0006241!8.82e-24!52;UBERON:0007135!8.82e-24!52;UBERON:0000955!2.43e-22!50;UBERON:0006238!2.43e-22!50;UBERON:0004121!4.06e-22!102;UBERON:0000924!4.06e-22!102;UBERON:0006601!4.06e-22!102;UBERON:0002346!5.29e-22!71;UBERON:0003075!5.29e-22!71;UBERON:0007284!5.29e-22!71;UBERON:0002020!1.81e-21!34;UBERON:0002616!1.91e-21!49;UBERON:0003056!4.87e-19!49;UBERON:0003080!1.07e-17!40;UBERON:0002791!1.43e-17!29;UBERON:0003528!1.43e-17!29;UBERON:0001893!1.43e-17!29;UBERON:0002780!4.87e-17!39;UBERON:0001890!4.87e-17!39;UBERON:0006240!4.87e-17!39;UBERON:0000956!1.74e-13!21;UBERON:0001869!1.74e-13!21;UBERON:0000203!1.74e-13!21;UBERON:0007811!2.59e-12!86;UBERON:0002619!1.34e-10!17;UBERON:0000153!8.38e-10!94;UBERON:0002021!2.92e-09!10;UBERON:0000411!2.92e-09!10;UBERON:0001950!2.92e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-45,54;UBERON:0001017,7.54e-44,73;UBERON:0001016,2.08e-42,75;UBERON:0001049,2.65e-42,52;UBERON:0005068,2.65e-42,52;UBERON:0006241,2.65e-42,52;UBERON:0007135,2.65e-42,52;UBERON:0002020,1.88e-37,34;UBERON:0000955,1.24e-34,47;UBERON:0006238,1.24e-34,47;UBERON:0002346,1.32e-34,64;UBERON:0003075,1.32e-34,64;UBERON:0007284,1.32e-34,64;UBERON:0004121,5.38e-33,95;UBERON:0000924,5.38e-33,95;UBERON:0006601,5.38e-33,95;UBERON:0002616,6.81e-33,46;UBERON:0010371,4.77e-31,73;UBERON:0003528,1.63e-29,29;UBERON:0002791,1.63e-29,29;UBERON:0001893,1.63e-29,29;UBERON:0003080,8.42e-29,40;UBERON:0002780,1.70e-27,39;UBERON:0001890,1.70e-27,39;UBERON:0006240,1.70e-27,39;UBERON:0003056,5.54e-24,49;UBERON:0000956,1.06e-22,21;UBERON:0001869,1.06e-22,21;UBERON:0000203,1.06e-22,21;UBERON:0010314,1.17e-22,92;UBERON:0002021,1.29e-17,10;UBERON:0000411,1.29e-17,10;UBERON:0001950,1.29e-17,10;UBERON:0002619,7.55e-17,17;UBERON:0000025,2.91e-14,114;UBERON:0004111,9.69e-14,122;UBERON:0003076,1.77e-13,12;UBERON:0003057,1.77e-13,12;UBERON:0011216,8.97e-11,194;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0001948,4.07e-09,5;UBERON:0002315,4.07e-09,5;UBERON:0002420,7.25e-08,8;UBERON:0007245,7.25e-08,8;UBERON:0010009,7.25e-08,8;UBERON:0010011,7.25e-08,8;UBERON:0000454,7.25e-08,8;UBERON:0000483,1.57e-07,174;UBERON:0000119,2.44e-07,176 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.319984845586813,0,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,1.89008313664367,1.89292465216244,3.14216082844184,1.32521124570968,2.44981598429908,0.862609239164127,0.919218786610021,3.30347642998166,2.042997409363,2.15049146558741,0.791317726381163,1.28082701043374,1.56274011167028,1.3959149950069,0,2.75036845998258,4.12480019663135,2.84743361598206,1.67759501242771,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.693941307064543,0.913396434936424,0,0,0,0,0,0,0,0,0,0,0,5.27005434620785,1.8850203613211,0,0,0,0,1.49790639404823,62.6775825861518,12.3141265070607,8.51739168942155,8.43861009190091,7.06479351502504,23.6872244078926,0,0,0,0.420883711772948,0,0,0.540186389416048,0.452114453507145,0.136072998302656,0.512454881139399,0.468508622798644,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8276868624118,8.33527360272204,0.660837565967596,0,0.639864751605702,0.928946687441754,1.03093969057675,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0,0.575392274901621,0.648540907100142,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.28932855251423,0,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.395287777946524,4.81981974632711,0,0,0,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,3.40439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.38097570952153,4.58316410751517,2.57779773515531,4.11049511862385,3.7769694869485,1.35004500046361,2.70192721934532,4.53142408984205,4.14208249401456,0.103787347584177,0.399024873401031,0,0,0.419226325255965,0,0.888986911206461,0.206035057238894,1.60459604795908,0,0.25347929989024,0.565879024158229,0.187283014939765,0.448176066834085,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0.824171801606613,0.883193520806384,0.342869252385415,0.354951612318675,0.715308569841963,0.436039249896986,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0,0.29551344712669,0,0.464810523557898,0.385813221962283,0.749431733813838,0.935726433781634,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr18:64424692..64424721,+ | |||
}} |
Revision as of 16:33, 13 September 2013
Short description: | p@chr18:64424692..64424721, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:64424692..64424721, + |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.38e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.38e-23 | 23 |
neuron | 1.82e-16 | 33 |
neuronal stem cell | 1.82e-16 | 33 |
neuroblast | 1.82e-16 | 33 |
electrically signaling cell | 1.82e-16 | 33 |
electrically responsive cell | 3.65e-13 | 39 |
electrically active cell | 3.65e-13 | 39 |
neural cell | 1.75e-11 | 43 |
ectodermal cell | 4.11e-11 | 44 |
neurectodermal cell | 4.11e-11 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.