FFCP PHASE1:Hg19::chr6:117002413..117002420,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3841|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6398|TSSclassifier=S|UniProt=O15131|association_with_transcript=46bp_to_ENST00000356348,NM_002269,uc003pxh.2_5end|description=CAGE_peak_2_at_KPNA5_5end|id=chr6:117002413..117002420,+|ontology_enrichment_celltype=CL:0000791!1.22e-08!18;CL:0000789!1.22e-08!18;CL:0002420!1.22e-08!18;CL:0002419!1.22e-08!18;CL:0000790!1.22e-08!18;CL:0000084!7.52e-07!25;CL:0000827!7.52e-07!25|ontology_enrichment_celltype_v019=CL:0000791;6.62e-13;18!CL:0000789;6.62e-13;18!CL:0002419;6.62e-13;18!CL:0000084;2.81e-11;25!CL:0000815;2.77e-09;2!CL:0000792;2.77e-09;2!CL:0002677;2.77e-09;2!CL:0000625;9.52e-09;11|ontology_enrichment_celltype_v019_2=CL:0000791,3.30e-13,18;CL:0000789,3.30e-13,18;CL:0002420,3.30e-13,18;CL:0002419,3.30e-13,18;CL:0000790,3.30e-13,18;CL:0000084,2.06e-11,25;CL:0000827,2.06e-11,25;CL:0000815,2.33e-09,2;CL:0000792,2.33e-09,2;CL:0002677,2.33e-09,2;CL:0000625,6.61e-09,11;CL:0000838,4.31e-07,52;CL:0000542,6.42e-07,53;CL:0000051,6.42e-07,53;CL:0000624,8.35e-07,6|ontology_enrichment_development_v019=CL:0000790;6.62e-13;18!UBERON:0006601;3.07e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.73e-18!57;UBERON:0005068!4.73e-18!57;UBERON:0006241!4.73e-18!57;UBERON:0007135!4.73e-18!57;UBERON:0000073!8.39e-18!94;UBERON:0001016!8.39e-18!94;UBERON:0001017!1.45e-17!82;UBERON:0005743!4.99e-17!86;UBERON:0002616!7.34e-16!59;UBERON:0002780!1.16e-15!41;UBERON:0001890!1.16e-15!41;UBERON:0006240!1.16e-15!41;UBERON:0003080!6.84e-15!42;UBERON:0002346!1.06e-14!90;UBERON:0001869!4.57e-14!32;UBERON:0003075!1.13e-13!86;UBERON:0007284!1.13e-13!86;UBERON:0000955!1.46e-13!69;UBERON:0006238!1.46e-13!69;UBERON:0002020!1.71e-13!34;UBERON:0003528!1.71e-13!34;UBERON:0001893!2.91e-13!34;UBERON:0002791!1.36e-12!33;UBERON:0002619!1.49e-12!22;UBERON:0007023!2.60e-12!115;UBERON:0000956!7.77e-12!25;UBERON:0000203!7.77e-12!25;UBERON:0003056!2.42e-11!61;UBERON:0001950!4.11e-11!20;UBERON:0000924!2.96e-09!173;UBERON:0006601!2.96e-09!173;UBERON:0004121!1.69e-08!169;UBERON:0000153!4.56e-08!129;UBERON:0007811!4.56e-08!129;UBERON:0000033!3.45e-07!123|ontology_enrichment_uberon_v019=UBERON:0002619;2.93e-19;22!UBERON:0000200;5.78e-17;6!UBERON:0000956;9.13e-17;25!UBERON:0000203;9.13e-17;25!UBERON:0001869;2.58e-15;32!UBERON:0001950;4.06e-14;20!UBERON:0002780;7.86e-14;41!UBERON:0001890;7.86e-14;41!UBERON:0002791;8.41e-14;32!UBERON:0001893;9.70e-14;34!UBERON:0003528;3.42e-13;34!UBERON:0002020;3.42e-13;34!UBERON:0001870;7.35e-13;3!UBERON:0000073;8.64e-13;53!UBERON:0002616;8.64e-13;53!UBERON:0000955;1.15e-09;68!UBERON:0003296;1.93e-09;4!UBERON:0010133;1.93e-09;4!UBERON:0001954;2.30e-09;2!UBERON:0003022;2.30e-09;2!UBERON:0002421;2.30e-09;2!UBERON:0002600;2.30e-09;2!UBERON:0002771;2.77e-09;2!UBERON:0002702;2.77e-09;2!UBERON:0001017;3.91e-09;75!UBERON:0000007;7.46e-09;2!UBERON:0001016;1.54e-08;83|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.59e-22,53;UBERON:0002616,1.59e-22,53;UBERON:0001016,2.40e-21,89;UBERON:0002780,4.09e-21,41;UBERON:0001890,4.09e-21,41;UBERON:0003080,4.09e-21,41;UBERON:0006240,4.09e-21,41;UBERON:0001049,4.30e-21,56;UBERON:0005068,4.30e-21,56;UBERON:0006241,4.30e-21,56;UBERON:0007135,4.30e-21,56;UBERON:0000955,1.99e-20,68;UBERON:0006238,1.99e-20,68;UBERON:0001017,3.93e-20,81;UBERON:0002619,1.09e-19,22;UBERON:0001869,2.29e-18,32;UBERON:0000200,2.39e-17,6;UBERON:0001893,3.82e-17,34;UBERON:0000956,3.83e-17,25;UBERON:0000203,3.83e-17,25;UBERON:0002791,1.46e-15,32;UBERON:0003056,6.77e-15,61;UBERON:0003075,1.25e-14,82;UBERON:0007284,1.25e-14,82;UBERON:0001950,1.52e-14,20;UBERON:0003528,1.61e-14,34;UBERON:0002020,1.61e-14,34;UBERON:0002346,9.78e-14,86;UBERON:0001870,6.75e-13,3;UBERON:0010371,8.50e-12,104;UBERON:0004121,2.37e-10,171;UBERON:0000924,2.37e-10,171;UBERON:0006601,2.37e-10,171;UBERON:0002771,1.15e-09,2;UBERON:0007023,2.14e-09,114;UBERON:0001954,2.98e-09,2;UBERON:0003022,2.98e-09,2;UBERON:0002421,2.98e-09,2;UBERON:0002600,2.98e-09,2;UBERON:0003296,3.19e-09,4;UBERON:0010133,3.19e-09,4;UBERON:0002702,3.23e-09,2;UBERON:0000007,1.59e-08,2;UBERON:0010314,2.44e-08,132|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,1.15148819429164,0.154816123316076,0,0,0,0.309868802321207,0.426507697462265,0.587200878669695,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0.242584061187816,0,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.637812899895131,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0,0.39783335439818,0,0,0.546138611262131,0,0,0.800791974072025,0,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3841 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6398 | |||
|TSSclassifier=S | |||
|UniProt=O15131 | |||
|association_with_transcript=46bp_to_ENST00000356348,NM_002269,uc003pxh.2_5end | |||
|description=CAGE_peak_2_at_KPNA5_5end | |||
|id=chr6:117002413..117002420,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.22e-08!18;CL:0000789!1.22e-08!18;CL:0002420!1.22e-08!18;CL:0002419!1.22e-08!18;CL:0000790!1.22e-08!18;CL:0000084!7.52e-07!25;CL:0000827!7.52e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.62e-13;18!CL:0000789;6.62e-13;18!CL:0002419;6.62e-13;18!CL:0000084;2.81e-11;25!CL:0000815;2.77e-09;2!CL:0000792;2.77e-09;2!CL:0002677;2.77e-09;2!CL:0000625;9.52e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.30e-13,18;CL:0000789,3.30e-13,18;CL:0002420,3.30e-13,18;CL:0002419,3.30e-13,18;CL:0000790,3.30e-13,18;CL:0000084,2.06e-11,25;CL:0000827,2.06e-11,25;CL:0000815,2.33e-09,2;CL:0000792,2.33e-09,2;CL:0002677,2.33e-09,2;CL:0000625,6.61e-09,11;CL:0000838,4.31e-07,52;CL:0000542,6.42e-07,53;CL:0000051,6.42e-07,53;CL:0000624,8.35e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.62e-13;18!UBERON:0006601;3.07e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@KPNA5 | |||
}} |
Revision as of 17:35, 13 September 2013
Short description: | p2@KPNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KPNA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000356348, NM_002269, uc003pxh.2_5end |
EntrezGene: | KPNA5 |
HGNC: | 6398 |
UniProt: | O15131 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.30e-13 | 18 |
alpha-beta T cell | 3.30e-13 | 18 |
immature T cell | 3.30e-13 | 18 |
mature T cell | 3.30e-13 | 18 |
immature alpha-beta T cell | 3.30e-13 | 18 |
T cell | 2.06e-11 | 25 |
pro-T cell | 2.06e-11 | 25 |
regulatory T cell | 2.33e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.33e-09 | 2 |
naive regulatory T cell | 2.33e-09 | 2 |
CD8-positive, alpha-beta T cell | 6.61e-09 | 11 |
lymphoid lineage restricted progenitor cell | 4.31e-07 | 52 |
lymphocyte | 6.42e-07 | 53 |
common lymphoid progenitor | 6.42e-07 | 53 |
CD4-positive, alpha-beta T cell | 8.35e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.