FFCP PHASE1:Mm9::chr1:174259392..174259438,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16524|HGNC=|MCL_coexpression_id=2|UniProt=P48543,Q544N3|association_with_transcript=0bp_to_ENSMUST00000062387,NM_008429,uc007dqg.1,uc007dqh.1_5end|description=CAGE_peak_1_at_Kcnj9_5end|id=chr1:174259392..174259438,-|ontology_enrichment_celltype=CL:0000117!6.66e-17!23;CL:0000337!6.66e-17!23;CL:0000540!5.07e-12!33;CL:0000047!5.07e-12!33;CL:0000031!5.07e-12!33;CL:0000404!5.07e-12!33;CL:0002319!1.81e-10!43;CL:0000221!5.15e-10!44;CL:0000133!5.15e-10!44;CL:0000393!7.43e-09!39;CL:0000211!7.43e-09!39;CL:0000055!1.03e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.79e-20,23;CL:0000337,9.79e-20,23;CL:0000540,4.26e-12,33;CL:0000047,4.26e-12,33;CL:0000031,4.26e-12,33;CL:0000404,4.26e-12,33;CL:0002319,5.23e-10,43;CL:0000221,1.18e-09,44;CL:0000133,1.18e-09,44;CL:0000393,1.94e-09,39;CL:0000211,1.94e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.52e-31!73;UBERON:0005743!2.52e-31!73;UBERON:0000073!7.09e-31!75;UBERON:0001016!7.09e-31!75;UBERON:0000033!2.75e-30!63;UBERON:0002346!6.17e-30!71;UBERON:0003075!6.17e-30!71;UBERON:0007284!6.17e-30!71;UBERON:0001049!6.77e-30!52;UBERON:0005068!6.77e-30!52;UBERON:0006241!6.77e-30!52;UBERON:0007135!6.77e-30!52;UBERON:0000955!4.33e-29!50;UBERON:0006238!4.33e-29!50;UBERON:0002616!3.72e-28!49;UBERON:0004121!6.07e-27!102;UBERON:0000924!6.07e-27!102;UBERON:0006601!6.07e-27!102;UBERON:0003056!2.60e-26!49;UBERON:0002020!3.68e-24!34;UBERON:0003080!5.68e-22!40;UBERON:0002780!4.10e-21!39;UBERON:0001890!4.10e-21!39;UBERON:0006240!4.10e-21!39;UBERON:0002791!1.53e-20!29;UBERON:0003528!1.53e-20!29;UBERON:0001893!1.53e-20!29;UBERON:0007811!5.33e-17!86;UBERON:0000956!2.95e-14!21;UBERON:0001869!2.95e-14!21;UBERON:0000203!2.95e-14!21;UBERON:0000153!5.21e-14!94;UBERON:0002619!4.89e-12!17;UBERON:0002021!1.43e-11!10;UBERON:0000411!1.43e-11!10;UBERON:0001950!1.43e-11!10;UBERON:0003076!2.77e-08!12;UBERON:0003057!2.77e-08!12;UBERON:0002420!1.72e-07!8;UBERON:0007245!1.72e-07!8;UBERON:0010009!1.72e-07!8;UBERON:0010011!1.72e-07!8;UBERON:0000454!1.72e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.15e-37,54;UBERON:0001017,2.93e-36,73;UBERON:0002346,3.15e-36,64;UBERON:0003075,3.15e-36,64;UBERON:0007284,3.15e-36,64;UBERON:0001016,6.00e-35,75;UBERON:0001049,1.43e-34,52;UBERON:0005068,1.43e-34,52;UBERON:0006241,1.43e-34,52;UBERON:0007135,1.43e-34,52;UBERON:0004121,2.07e-33,95;UBERON:0000924,2.07e-33,95;UBERON:0006601,2.07e-33,95;UBERON:0002020,1.34e-31,34;UBERON:0010371,3.04e-30,73;UBERON:0000955,4.19e-29,47;UBERON:0006238,4.19e-29,47;UBERON:0003056,5.60e-28,49;UBERON:0002616,8.39e-28,46;UBERON:0003528,5.00e-26,29;UBERON:0002791,5.00e-26,29;UBERON:0001893,5.00e-26,29;UBERON:0003080,3.01e-24,40;UBERON:0002780,5.09e-23,39;UBERON:0001890,5.09e-23,39;UBERON:0006240,5.09e-23,39;UBERON:0010314,1.77e-21,92;UBERON:0002619,1.19e-18,17;UBERON:0002021,3.11e-17,10;UBERON:0000411,3.11e-17,10;UBERON:0001950,3.11e-17,10;UBERON:0000956,1.62e-16,21;UBERON:0001869,1.62e-16,21;UBERON:0000203,1.62e-16,21;UBERON:0002420,7.52e-11,8;UBERON:0007245,7.52e-11,8;UBERON:0010009,7.52e-11,8;UBERON:0010011,7.52e-11,8;UBERON:0000454,7.52e-11,8;UBERON:0003076,1.53e-10,12;UBERON:0003057,1.53e-10,12;UBERON:0000025,5.94e-10,114;UBERON:0004111,1.19e-08,122;UBERON:0002240,8.29e-08,6;UBERON:0005174,8.29e-08,6;UBERON:0001137,8.29e-08,6;UBERON:0000369,6.11e-07,5;UBERON:0002435,6.11e-07,5;UBERON:0000204,6.11e-07,5;UBERON:0010082,6.11e-07,5;UBERON:0002950,9.36e-07,4;UBERON:0001891,9.36e-07,4;UBERON:0009616,9.36e-07,4;UBERON:0010286,9.36e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2403030559546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,4.65327859977075,1.5869729378161,6.33831403506179,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,0.725827286159344,0.675029691658453,0.841299845405528,2.85650984403804,8.1721360152097,1.34739879136449,1.0543001812006,1.83843757322004,55.0579404996944,63.8436690425939,60.3673675697037,5.80299666012853,4.48289453651807,3.12548022334056,34.3395088771699,43.3327209724394,36.213184723104,4.41942878210502,5.26775218956681,2.60959224155421,0.151452386666368,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,77.0013496140369,82.9408958981282,0,0,0,0,33.1037313084658,22.4175295381127,5.6544458450789,63.2720525499886,77.7374990284205,42.8043371792694,43.6428997652268,0,0,0,6.31325567659422,0,0.919608417733892,0.540186389416048,1.20563854268572,2.04109497453984,2.8185018462667,1.78033276663485,15.0047955028629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.380161101594,2.46971069710283,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2293743384618,22.9734905720718,0,0,0,0,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,36.3093087556642,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,2.7235168460303,0.18006109403131,0.129358683782755,0,0,0,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,11.1255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,0,0,0,29.8757257502621,0,0,0,0,0,0,0,0,9.42178071221424,14.4015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,107.86760193986,103.573178214115,101.975401392213,101.221524400432,119.204358440092,135.215507632756,124.879162542884,130.593148935024,122.348450425735,106.658624220875,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0,0.754505365544305,0.468207537349412,0.448176066834085,1.20614484806788,1.42888107384922,0.231768651889711,0,1.23625770240992,0.441596760403192,0.342869252385415,0.887379030796687,0.715308569841963,0,0.564656282491984,0.338458431566706,0,0.526139422875686,0.543216455383447,0,0.355905054372522,0.689531376628944,0.409231043169689,0.154936841185966,0.771626443924566,1.49886346762768,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p1@Kcnj9}} | ||
|EntrezGene=16524 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P48543,Q544N3 | |||
|association_with_transcript=0bp_to_ENSMUST00000062387,NM_008429,uc007dqg.1,uc007dqh.1_5end | |||
|description=CAGE_peak_1_at_Kcnj9_5end | |||
|id=chr1:174259392..174259438,- | |||
|ontology_enrichment_celltype=CL:0000117!6.66e-17!23;CL:0000337!6.66e-17!23;CL:0000540!5.07e-12!33;CL:0000047!5.07e-12!33;CL:0000031!5.07e-12!33;CL:0000404!5.07e-12!33;CL:0002319!1.81e-10!43;CL:0000221!5.15e-10!44;CL:0000133!5.15e-10!44;CL:0000393!7.43e-09!39;CL:0000211!7.43e-09!39;CL:0000055!1.03e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.79e-20,23;CL:0000337,9.79e-20,23;CL:0000540,4.26e-12,33;CL:0000047,4.26e-12,33;CL:0000031,4.26e-12,33;CL:0000404,4.26e-12,33;CL:0002319,5.23e-10,43;CL:0000221,1.18e-09,44;CL:0000133,1.18e-09,44;CL:0000393,1.94e-09,39;CL:0000211,1.94e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.52e-31!73;UBERON:0005743!2.52e-31!73;UBERON:0000073!7.09e-31!75;UBERON:0001016!7.09e-31!75;UBERON:0000033!2.75e-30!63;UBERON:0002346!6.17e-30!71;UBERON:0003075!6.17e-30!71;UBERON:0007284!6.17e-30!71;UBERON:0001049!6.77e-30!52;UBERON:0005068!6.77e-30!52;UBERON:0006241!6.77e-30!52;UBERON:0007135!6.77e-30!52;UBERON:0000955!4.33e-29!50;UBERON:0006238!4.33e-29!50;UBERON:0002616!3.72e-28!49;UBERON:0004121!6.07e-27!102;UBERON:0000924!6.07e-27!102;UBERON:0006601!6.07e-27!102;UBERON:0003056!2.60e-26!49;UBERON:0002020!3.68e-24!34;UBERON:0003080!5.68e-22!40;UBERON:0002780!4.10e-21!39;UBERON:0001890!4.10e-21!39;UBERON:0006240!4.10e-21!39;UBERON:0002791!1.53e-20!29;UBERON:0003528!1.53e-20!29;UBERON:0001893!1.53e-20!29;UBERON:0007811!5.33e-17!86;UBERON:0000956!2.95e-14!21;UBERON:0001869!2.95e-14!21;UBERON:0000203!2.95e-14!21;UBERON:0000153!5.21e-14!94;UBERON:0002619!4.89e-12!17;UBERON:0002021!1.43e-11!10;UBERON:0000411!1.43e-11!10;UBERON:0001950!1.43e-11!10;UBERON:0003076!2.77e-08!12;UBERON:0003057!2.77e-08!12;UBERON:0002420!1.72e-07!8;UBERON:0007245!1.72e-07!8;UBERON:0010009!1.72e-07!8;UBERON:0010011!1.72e-07!8;UBERON:0000454!1.72e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.15e-37,54;UBERON:0001017,2.93e-36,73;UBERON:0002346,3.15e-36,64;UBERON:0003075,3.15e-36,64;UBERON:0007284,3.15e-36,64;UBERON:0001016,6.00e-35,75;UBERON:0001049,1.43e-34,52;UBERON:0005068,1.43e-34,52;UBERON:0006241,1.43e-34,52;UBERON:0007135,1.43e-34,52;UBERON:0004121,2.07e-33,95;UBERON:0000924,2.07e-33,95;UBERON:0006601,2.07e-33,95;UBERON:0002020,1.34e-31,34;UBERON:0010371,3.04e-30,73;UBERON:0000955,4.19e-29,47;UBERON:0006238,4.19e-29,47;UBERON:0003056,5.60e-28,49;UBERON:0002616,8.39e-28,46;UBERON:0003528,5.00e-26,29;UBERON:0002791,5.00e-26,29;UBERON:0001893,5.00e-26,29;UBERON:0003080,3.01e-24,40;UBERON:0002780,5.09e-23,39;UBERON:0001890,5.09e-23,39;UBERON:0006240,5.09e-23,39;UBERON:0010314,1.77e-21,92;UBERON:0002619,1.19e-18,17;UBERON:0002021,3.11e-17,10;UBERON:0000411,3.11e-17,10;UBERON:0001950,3.11e-17,10;UBERON:0000956,1.62e-16,21;UBERON:0001869,1.62e-16,21;UBERON:0000203,1.62e-16,21;UBERON:0002420,7.52e-11,8;UBERON:0007245,7.52e-11,8;UBERON:0010009,7.52e-11,8;UBERON:0010011,7.52e-11,8;UBERON:0000454,7.52e-11,8;UBERON:0003076,1.53e-10,12;UBERON:0003057,1.53e-10,12;UBERON:0000025,5.94e-10,114;UBERON:0004111,1.19e-08,122;UBERON:0002240,8.29e-08,6;UBERON:0005174,8.29e-08,6;UBERON:0001137,8.29e-08,6;UBERON:0000369,6.11e-07,5;UBERON:0002435,6.11e-07,5;UBERON:0000204,6.11e-07,5;UBERON:0010082,6.11e-07,5;UBERON:0002950,9.36e-07,4;UBERON:0001891,9.36e-07,4;UBERON:0009616,9.36e-07,4;UBERON:0010286,9.36e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2403030559546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,4.65327859977075,1.5869729378161,6.33831403506179,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,0.725827286159344,0.675029691658453,0.841299845405528,2.85650984403804,8.1721360152097,1.34739879136449,1.0543001812006,1.83843757322004,55.0579404996944,63.8436690425939,60.3673675697037,5.80299666012853,4.48289453651807,3.12548022334056,34.3395088771699,43.3327209724394,36.213184723104,4.41942878210502,5.26775218956681,2.60959224155421,0.151452386666368,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,77.0013496140369,82.9408958981282,0,0,0,0,33.1037313084658,22.4175295381127,5.6544458450789,63.2720525499886,77.7374990284205,42.8043371792694,43.6428997652268,0,0,0,6.31325567659422,0,0.919608417733892,0.540186389416048,1.20563854268572,2.04109497453984,2.8185018462667,1.78033276663485,15.0047955028629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.380161101594,2.46971069710283,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2293743384618,22.9734905720718,0,0,0,0,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,36.3093087556642,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,2.7235168460303,0.18006109403131,0.129358683782755,0,0,0,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,11.1255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,0,0,0,29.8757257502621,0,0,0,0,0,0,0,0,9.42178071221424,14.4015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,107.86760193986,103.573178214115,101.975401392213,101.221524400432,119.204358440092,135.215507632756,124.879162542884,130.593148935024,122.348450425735,106.658624220875,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0,0.754505365544305,0.468207537349412,0.448176066834085,1.20614484806788,1.42888107384922,0.231768651889711,0,1.23625770240992,0.441596760403192,0.342869252385415,0.887379030796687,0.715308569841963,0,0.564656282491984,0.338458431566706,0,0.526139422875686,0.543216455383447,0,0.355905054372522,0.689531376628944,0.409231043169689,0.154936841185966,0.771626443924566,1.49886346762768,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Kcnj9 | |||
}} |
Revision as of 19:46, 13 September 2013
Short description: | p1@Kcnj9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnj9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000062387, NM_008429, uc007dqg.1, uc007dqh.1_5end |
EntrezGene: | Kcnj9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.79e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.79e-20 | 23 |
neuron | 4.26e-12 | 33 |
neuronal stem cell | 4.26e-12 | 33 |
neuroblast | 4.26e-12 | 33 |
electrically signaling cell | 4.26e-12 | 33 |
neural cell | 5.23e-10 | 43 |
ectodermal cell | 1.18e-09 | 44 |
neurectodermal cell | 1.18e-09 | 44 |
electrically responsive cell | 1.94e-09 | 39 |
electrically active cell | 1.94e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.