FFCP PHASE1:Hg19::chr7:119913374..119913397,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3751|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6238|TSSclassifier=W|UniProt=Q9NZV8,A4D0V9|association_with_transcript=-324bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end|coexpression_cluster_id=C710|description=CAGE_peak_3_at_KCND2_5end|id=chr7:119913374..119913397,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;1.83e-08;1!CL:0002625;1.83e-08;1!CL:0000216;1.83e-08;1|ontology_enrichment_celltype_v019_2=CL:0000511,1.18e-08,1;CL:0002625,1.18e-08,1;CL:0000216,1.18e-08,1|ontology_enrichment_development_v019=UBERON:0006215;2.47e-23;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.14e-44!57;UBERON:0005068!9.14e-44!57;UBERON:0006241!9.14e-44!57;UBERON:0007135!9.14e-44!57;UBERON:0001017!4.57e-43!82;UBERON:0005743!2.69e-40!86;UBERON:0002616!3.62e-37!59;UBERON:0000073!6.43e-35!94;UBERON:0001016!6.43e-35!94;UBERON:0000955!4.83e-33!69;UBERON:0006238!4.83e-33!69;UBERON:0002020!1.54e-29!34;UBERON:0003528!1.54e-29!34;UBERON:0001893!1.99e-29!34;UBERON:0007023!3.85e-29!115;UBERON:0002780!8.41e-29!41;UBERON:0001890!8.41e-29!41;UBERON:0006240!8.41e-29!41;UBERON:0003075!1.75e-28!86;UBERON:0007284!1.75e-28!86;UBERON:0002791!4.54e-28!33;UBERON:0003080!6.80e-28!42;UBERON:0001869!3.08e-27!32;UBERON:0002346!1.43e-26!90;UBERON:0002619!5.82e-24!22;UBERON:0001950!7.63e-21!20;UBERON:0000956!1.87e-20!25;UBERON:0000203!1.87e-20!25;UBERON:0003056!1.62e-17!61;UBERON:0003076!2.80e-17!15;UBERON:0003057!2.80e-17!15;UBERON:0004121!1.66e-16!169;UBERON:0000033!1.85e-16!123;UBERON:0000153!6.47e-16!129;UBERON:0007811!6.47e-16!129;UBERON:0000924!9.43e-16!173;UBERON:0006601!9.43e-16!173;UBERON:0004733!2.76e-13!12;UBERON:0002028!2.76e-13!12;UBERON:0007277!2.76e-13!12;UBERON:0004732!4.70e-12!13;UBERON:0000025!1.22e-10!194;UBERON:0002308!1.25e-10!9;UBERON:0000125!1.25e-10!9;UBERON:0002298!8.34e-10!8;UBERON:0002021!2.45e-09!5;UBERON:0002680!4.47e-09!9;UBERON:0001895!4.47e-09!9;UBERON:0010092!4.47e-09!9;UBERON:0002420!3.69e-08!9;UBERON:0007245!3.69e-08!9;UBERON:0010009!3.69e-08!9;UBERON:0010011!3.69e-08!9;UBERON:0000454!3.69e-08!9;UBERON:0009663!6.21e-08!7;UBERON:0004111!8.48e-08!241;UBERON:0001871!2.32e-07!7;UBERON:0000475!4.08e-07!365;UBERON:0000200!5.81e-07!6|ontology_enrichment_uberon_v019=UBERON:0002619;3.85e-29;22!UBERON:0000956;1.36e-25;25!UBERON:0000203;1.36e-25;25!UBERON:0002791;1.41e-22;32!UBERON:0001869;1.57e-22;32!UBERON:0001950;1.56e-20;20!UBERON:0003528;3.20e-19;34!UBERON:0002020;3.20e-19;34!UBERON:0001893;1.05e-18;34!UBERON:0000073;3.11e-18;53!UBERON:0002616;3.11e-18;53!UBERON:0002780;3.22e-17;41!UBERON:0001890;3.22e-17;41!UBERON:0004733;3.03e-15;12!UBERON:0002028;3.03e-15;12!UBERON:0001954;3.20e-15;2!UBERON:0003022;3.20e-15;2!UBERON:0002421;3.20e-15;2!UBERON:0002600;3.20e-15;2!UBERON:0004732;4.65e-14;13!UBERON:0002680;1.81e-13;9!UBERON:0001895;1.81e-13;9!UBERON:0002021;2.11e-13;5!UBERON:0000349;2.11e-13;5!UBERON:0001017;5.20e-13;75!UBERON:0000955;5.57e-13;68!UBERON:0001016;2.49e-12;83!UBERON:0002037;6.07e-12;6!UBERON:0001882;1.83e-08;1!UBERON:0002022;1.83e-08;1!UBERON:0003112;1.83e-08;1!UBERON:0001136;1.83e-08;1!UBERON:0001343;1.83e-08;1!UBERON:0011158;1.83e-08;1!UBERON:0004910;1.83e-08;1!UBERON:0004813;1.83e-08;1!UBERON:0003128;1.83e-08;1!UBERON:0005403;1.83e-08;1!UBERON:0001703;1.83e-08;1!UBERON:0002241;1.83e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.12e-34,81;UBERON:0001049,5.67e-33,56;UBERON:0005068,5.67e-33,56;UBERON:0006241,5.67e-33,56;UBERON:0007135,5.67e-33,56;UBERON:0000073,1.01e-30,53;UBERON:0002616,1.01e-30,53;UBERON:0001016,2.13e-30,89;UBERON:0002619,5.13e-29,22;UBERON:0000955,3.04e-26,68;UBERON:0006238,3.04e-26,68;UBERON:0000956,1.74e-25,25;UBERON:0000203,1.74e-25,25;UBERON:0002791,7.09e-24,32;UBERON:0001869,7.09e-24,32;UBERON:0003528,2.10e-22,34;UBERON:0002020,2.10e-22,34;UBERON:0001893,2.10e-22,34;UBERON:0003075,1.24e-21,82;UBERON:0007284,1.24e-21,82;UBERON:0002346,1.73e-20,86;UBERON:0001950,2.46e-20,20;UBERON:0002780,2.34e-18,41;UBERON:0001890,2.34e-18,41;UBERON:0003080,2.34e-18,41;UBERON:0006240,2.34e-18,41;UBERON:0003076,2.85e-17,15;UBERON:0003057,2.85e-17,15;UBERON:0010371,2.04e-16,104;UBERON:0001954,1.80e-15,2;UBERON:0003022,1.80e-15,2;UBERON:0002421,1.80e-15,2;UBERON:0002600,1.80e-15,2;UBERON:0004733,3.05e-15,12;UBERON:0002028,3.05e-15,12;UBERON:0007277,3.05e-15,12;UBERON:0004121,3.15e-14,171;UBERON:0000924,3.15e-14,171;UBERON:0006601,3.15e-14,171;UBERON:0004732,4.68e-14,13;UBERON:0010314,5.30e-14,132;UBERON:0002680,1.32e-13,9;UBERON:0001895,1.32e-13,9;UBERON:0010092,1.32e-13,9;UBERON:0000349,2.12e-13,5;UBERON:0002021,3.68e-13,5;UBERON:0011216,1.51e-12,223;UBERON:0002037,6.09e-12,6;UBERON:0006215,6.09e-12,6;UBERON:0003056,7.94e-12,61;UBERON:0007023,2.72e-11,114;UBERON:0003112,9.46e-09,1;UBERON:0011158,9.46e-09,1;UBERON:0003128,9.46e-09,1;UBERON:0001703,9.46e-09,1;UBERON:0002241,9.46e-09,1;UBERON:0004761,9.46e-0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3751 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6238 | |||
|TSSclassifier=W | |||
|UniProt=Q9NZV8,A4D0V9 | |||
|association_with_transcript=-324bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | |||
|coexpression_cluster_id=C710 | |||
|description=CAGE_peak_3_at_KCND2_5end | |||
|id=chr7:119913374..119913397,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.83e-08;1!CL:0002625;1.83e-08;1!CL:0000216;1.83e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.18e-08,1;CL:0002625,1.18e-08,1;CL:0000216,1.18e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.47e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.14e-44!57;UBERON:0005068!9.14e-44!57;UBERON:0006241!9.14e-44!57;UBERON:0007135!9.14e-44!57;UBERON:0001017!4.57e-43!82;UBERON:0005743!2.69e-40!86;UBERON:0002616!3.62e-37!59;UBERON:0000073!6.43e-35!94;UBERON:0001016!6.43e-35!94;UBERON:0000955!4.83e-33!69;UBERON:0006238!4.83e-33!69;UBERON:0002020!1.54e-29!34;UBERON:0003528!1.54e-29!34;UBERON:0001893!1.99e-29!34;UBERON:0007023!3.85e-29!115;UBERON:0002780!8.41e-29!41;UBERON:0001890!8.41e-29!41;UBERON:0006240!8.41e-29!41;UBERON:0003075!1.75e-28!86;UBERON:0007284!1.75e-28!86;UBERON:0002791!4.54e-28!33;UBERON:0003080!6.80e-28!42;UBERON:0001869!3.08e-27!32;UBERON:0002346!1.43e-26!90;UBERON:0002619!5.82e-24!22;UBERON:0001950!7.63e-21!20;UBERON:0000956!1.87e-20!25;UBERON:0000203!1.87e-20!25;UBERON:0003056!1.62e-17!61;UBERON:0003076!2.80e-17!15;UBERON:0003057!2.80e-17!15;UBERON:0004121!1.66e-16!169;UBERON:0000033!1.85e-16!123;UBERON:0000153!6.47e-16!129;UBERON:0007811!6.47e-16!129;UBERON:0000924!9.43e-16!173;UBERON:0006601!9.43e-16!173;UBERON:0004733!2.76e-13!12;UBERON:0002028!2.76e-13!12;UBERON:0007277!2.76e-13!12;UBERON:0004732!4.70e-12!13;UBERON:0000025!1.22e-10!194;UBERON:0002308!1.25e-10!9;UBERON:0000125!1.25e-10!9;UBERON:0002298!8.34e-10!8;UBERON:0002021!2.45e-09!5;UBERON:0002680!4.47e-09!9;UBERON:0001895!4.47e-09!9;UBERON:0010092!4.47e-09!9;UBERON:0002420!3.69e-08!9;UBERON:0007245!3.69e-08!9;UBERON:0010009!3.69e-08!9;UBERON:0010011!3.69e-08!9;UBERON:0000454!3.69e-08!9;UBERON:0009663!6.21e-08!7;UBERON:0004111!8.48e-08!241;UBERON:0001871!2.32e-07!7;UBERON:0000475!4.08e-07!365;UBERON:0000200!5.81e-07!6 | |||
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|short_description=p3@KCND2 | |||
}} |
Revision as of 22:55, 13 September 2013
Short description: | p3@KCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCND2_5end |
Coexpression cluster: | C710_anaplastic_cerebellum_xeroderma_B_carcinoid_merkel_occipital |
Association with transcript: | -324bp_to_ENST00000331113, NM_012281, uc003vjj.1_5end |
EntrezGene: | KCND2 |
HGNC: | 6238 |
UniProt: | Q9NZV8A4D0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.18e-08 | 1 |
seminiferous tubule epithelial cell | 1.18e-08 | 1 |
Sertoli cell | 1.18e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.