FFCP PHASE1:Mm9::chr2:35835357..35835379,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74410|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=53bp_to_ENSMUST00000127742_5end|description=CAGE_peak_3_at_Ttll11_5end|id=chr2:35835357..35835379,-|ontology_enrichment_celltype=CL:0000117!6.48e-13!23;CL:0000337!6.48e-13!23;CL:0000540!5.78e-11!33;CL:0000047!5.78e-11!33;CL:0000031!5.78e-11!33;CL:0000404!5.78e-11!33;CL:0000393!5.98e-10!39;CL:0000211!5.98e-10!39;CL:0000221!6.67e-09!44;CL:0000133!6.67e-09!44;CL:0002319!1.16e-08!43;CL:0000055!1.18e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.81e-18,23;CL:0000337,7.81e-18,23;CL:0000540,8.27e-13,33;CL:0000047,8.27e-13,33;CL:0000031,8.27e-13,33;CL:0000404,8.27e-13,33;CL:0000393,3.76e-10,39;CL:0000211,3.76e-10,39;CL:0002319,8.39e-09,43;CL:0000221,1.66e-08,44;CL:0000133,1.66e-08,44;CL:0002612,2.89e-07,3;CL:0002609,3.02e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.84e-21!73;UBERON:0005743!5.84e-21!73;UBERON:0000073!6.43e-21!75;UBERON:0001016!6.43e-21!75;UBERON:0002020!1.06e-19!34;UBERON:0001049!1.63e-19!52;UBERON:0005068!1.63e-19!52;UBERON:0006241!1.63e-19!52;UBERON:0007135!1.63e-19!52;UBERON:0002346!1.75e-18!71;UBERON:0003075!1.75e-18!71;UBERON:0007284!1.75e-18!71;UBERON:0000955!4.26e-17!50;UBERON:0006238!4.26e-17!50;UBERON:0004121!1.08e-16!102;UBERON:0000924!1.08e-16!102;UBERON:0006601!1.08e-16!102;UBERON:0002616!1.62e-16!49;UBERON:0000033!4.57e-16!63;UBERON:0002791!4.80e-16!29;UBERON:0003528!4.80e-16!29;UBERON:0001893!4.80e-16!29;UBERON:0003080!4.10e-15!40;UBERON:0003056!5.82e-15!49;UBERON:0002780!1.58e-14!39;UBERON:0001890!1.58e-14!39;UBERON:0006240!1.58e-14!39;UBERON:0000956!3.74e-12!21;UBERON:0001869!3.74e-12!21;UBERON:0000203!3.74e-12!21;UBERON:0007811!2.81e-11!86;UBERON:0002619!5.49e-10!17;UBERON:0000153!1.25e-09!94;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.65e-38,52;UBERON:0005068,1.65e-38,52;UBERON:0006241,1.65e-38,52;UBERON:0007135,1.65e-38,52;UBERON:0002020,4.24e-38,34;UBERON:0000073,5.33e-37,54;UBERON:0001017,2.65e-34,73;UBERON:0001016,4.08e-33,75;UBERON:0000955,2.72e-30,47;UBERON:0006238,2.72e-30,47;UBERON:0002346,1.61e-29,64;UBERON:0003075,1.61e-29,64;UBERON:0007284,1.61e-29,64;UBERON:0003528,4.33e-29,29;UBERON:0002791,4.33e-29,29;UBERON:0001893,4.33e-29,29;UBERON:0002616,6.56e-29,46;UBERON:0003080,2.03e-25,40;UBERON:0000956,3.34e-25,21;UBERON:0001869,3.34e-25,21;UBERON:0000203,3.34e-25,21;UBERON:0010371,1.01e-24,73;UBERON:0002780,4.78e-24,39;UBERON:0001890,4.78e-24,39;UBERON:0006240,4.78e-24,39;UBERON:0004121,5.47e-24,95;UBERON:0000924,5.47e-24,95;UBERON:0006601,5.47e-24,95;UBERON:0002619,7.54e-22,17;UBERON:0003056,1.96e-19,49;UBERON:0010314,1.09e-17,92;UBERON:0002021,2.44e-17,10;UBERON:0000411,2.44e-17,10;UBERON:0001950,2.44e-17,10;UBERON:0003076,2.13e-13,12;UBERON:0003057,2.13e-13,12;UBERON:0000025,1.67e-12,114;UBERON:0002240,1.91e-11,6;UBERON:0005174,1.91e-11,6;UBERON:0001137,1.91e-11,6;UBERON:0004111,4.34e-11,122;UBERON:0001948,1.96e-10,5;UBERON:0002315,1.96e-10,5;UBERON:0000369,3.11e-09,5;UBERON:0002435,3.11e-09,5;UBERON:0000204,3.11e-09,5;UBERON:0010082,3.11e-09,5;UBERON:0011216,7.03e-08,194;UBERON:0002257,2.89e-07,3;UBERON:0000483,6.90e-07,174|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.985521055061667,1.17032263160997,0.513653904676515,0.398860794976682,0.171200729931206,0.262261207256992,0,0,0,0.315462165358238,0,0,0.935476191661768,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,1.25559489221072,0.7813353445238,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0.167782606057736,1.45072428402269,0,0,0,0.515672092277442,4.65327859977075,2.64495489636016,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,1.14058573539325,0.675029691658453,3.78584930432488,3.14216082844184,2.42955395046775,1.83736198822431,1.62937300731002,2.75765635983006,2.20231761998777,0.510749352340751,0.46081959976873,2.76961204233407,3.11057988248193,2.6045668527838,0.558365998002762,0.56276261003168,0.916789486660861,4.71405736757868,4.12877874317399,5.59198337475902,0.454357159999104,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0.563373679106722,0,2.54805239706646,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0.376999773989026,0,0,0,0.161766849947409,0,0,0,2.63502717310392,1.46612694769419,0,0.11981512450592,0,0,2.39665023047716,1.37250180845588,2.63874139437015,3.99795936442236,3.58001640262463,1.66230435647648,2.43361894601636,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.816437989815934,0.640568601424249,0.749613796477831,0.517406741478031,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0,0,0,0.15426711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| ||
|EntrezGene=74410 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENSMUST00000127742_5end | |||
|description=CAGE_peak_3_at_Ttll11_5end | |||
|id=chr2:35835357..35835379,- | |||
|ontology_enrichment_celltype=CL:0000117!6.48e-13!23;CL:0000337!6.48e-13!23;CL:0000540!5.78e-11!33;CL:0000047!5.78e-11!33;CL:0000031!5.78e-11!33;CL:0000404!5.78e-11!33;CL:0000393!5.98e-10!39;CL:0000211!5.98e-10!39;CL:0000221!6.67e-09!44;CL:0000133!6.67e-09!44;CL:0002319!1.16e-08!43;CL:0000055!1.18e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.81e-18,23;CL:0000337,7.81e-18,23;CL:0000540,8.27e-13,33;CL:0000047,8.27e-13,33;CL:0000031,8.27e-13,33;CL:0000404,8.27e-13,33;CL:0000393,3.76e-10,39;CL:0000211,3.76e-10,39;CL:0002319,8.39e-09,43;CL:0000221,1.66e-08,44;CL:0000133,1.66e-08,44;CL:0002612,2.89e-07,3;CL:0002609,3.02e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.84e-21!73;UBERON:0005743!5.84e-21!73;UBERON:0000073!6.43e-21!75;UBERON:0001016!6.43e-21!75;UBERON:0002020!1.06e-19!34;UBERON:0001049!1.63e-19!52;UBERON:0005068!1.63e-19!52;UBERON:0006241!1.63e-19!52;UBERON:0007135!1.63e-19!52;UBERON:0002346!1.75e-18!71;UBERON:0003075!1.75e-18!71;UBERON:0007284!1.75e-18!71;UBERON:0000955!4.26e-17!50;UBERON:0006238!4.26e-17!50;UBERON:0004121!1.08e-16!102;UBERON:0000924!1.08e-16!102;UBERON:0006601!1.08e-16!102;UBERON:0002616!1.62e-16!49;UBERON:0000033!4.57e-16!63;UBERON:0002791!4.80e-16!29;UBERON:0003528!4.80e-16!29;UBERON:0001893!4.80e-16!29;UBERON:0003080!4.10e-15!40;UBERON:0003056!5.82e-15!49;UBERON:0002780!1.58e-14!39;UBERON:0001890!1.58e-14!39;UBERON:0006240!1.58e-14!39;UBERON:0000956!3.74e-12!21;UBERON:0001869!3.74e-12!21;UBERON:0000203!3.74e-12!21;UBERON:0007811!2.81e-11!86;UBERON:0002619!5.49e-10!17;UBERON:0000153!1.25e-09!94;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.65e-38,52;UBERON:0005068,1.65e-38,52;UBERON:0006241,1.65e-38,52;UBERON:0007135,1.65e-38,52;UBERON:0002020,4.24e-38,34;UBERON:0000073,5.33e-37,54;UBERON:0001017,2.65e-34,73;UBERON:0001016,4.08e-33,75;UBERON:0000955,2.72e-30,47;UBERON:0006238,2.72e-30,47;UBERON:0002346,1.61e-29,64;UBERON:0003075,1.61e-29,64;UBERON:0007284,1.61e-29,64;UBERON:0003528,4.33e-29,29;UBERON:0002791,4.33e-29,29;UBERON:0001893,4.33e-29,29;UBERON:0002616,6.56e-29,46;UBERON:0003080,2.03e-25,40;UBERON:0000956,3.34e-25,21;UBERON:0001869,3.34e-25,21;UBERON:0000203,3.34e-25,21;UBERON:0010371,1.01e-24,73;UBERON:0002780,4.78e-24,39;UBERON:0001890,4.78e-24,39;UBERON:0006240,4.78e-24,39;UBERON:0004121,5.47e-24,95;UBERON:0000924,5.47e-24,95;UBERON:0006601,5.47e-24,95;UBERON:0002619,7.54e-22,17;UBERON:0003056,1.96e-19,49;UBERON:0010314,1.09e-17,92;UBERON:0002021,2.44e-17,10;UBERON:0000411,2.44e-17,10;UBERON:0001950,2.44e-17,10;UBERON:0003076,2.13e-13,12;UBERON:0003057,2.13e-13,12;UBERON:0000025,1.67e-12,114;UBERON:0002240,1.91e-11,6;UBERON:0005174,1.91e-11,6;UBERON:0001137,1.91e-11,6;UBERON:0004111,4.34e-11,122;UBERON:0001948,1.96e-10,5;UBERON:0002315,1.96e-10,5;UBERON:0000369,3.11e-09,5;UBERON:0002435,3.11e-09,5;UBERON:0000204,3.11e-09,5;UBERON:0010082,3.11e-09,5;UBERON:0011216,7.03e-08,194;UBERON:0002257,2.89e-07,3;UBERON:0000483,6.90e-07,174 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.985521055061667,1.17032263160997,0.513653904676515,0.398860794976682,0.171200729931206,0.262261207256992,0,0,0,0.315462165358238,0,0,0.935476191661768,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,1.25559489221072,0.7813353445238,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0.167782606057736,1.45072428402269,0,0,0,0.515672092277442,4.65327859977075,2.64495489636016,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,1.14058573539325,0.675029691658453,3.78584930432488,3.14216082844184,2.42955395046775,1.83736198822431,1.62937300731002,2.75765635983006,2.20231761998777,0.510749352340751,0.46081959976873,2.76961204233407,3.11057988248193,2.6045668527838,0.558365998002762,0.56276261003168,0.916789486660861,4.71405736757868,4.12877874317399,5.59198337475902,0.454357159999104,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0.563373679106722,0,2.54805239706646,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0.376999773989026,0,0,0,0.161766849947409,0,0,0,2.63502717310392,1.46612694769419,0,0.11981512450592,0,0,2.39665023047716,1.37250180845588,2.63874139437015,3.99795936442236,3.58001640262463,1.66230435647648,2.43361894601636,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.816437989815934,0.640568601424249,0.749613796477831,0.517406741478031,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0,0.536546802799238,0.817357396570186,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,3.57492912559016,3.70456604565424,0,0,0.213288250535234,0,0.128867461322093,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0.387904974335251,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.493588655687202,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,1.12385412991454,1.17211686592203,0,0.757412781613119,0.94652465824877,0,0.861693590931196,0.477937595905104,0,0,2.83367491172426,0.584511715822624,0,1.92792789853084,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0.713475270408282,0.329098041204242,0.913394847343798,0,0,0,0,0,0.180938774784468,0,0.164140899745061,0,1.11255181206306,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0.279902904647316,0.276399947608848,0,0.158167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0,0.269728692769641,0.247960367176008,0.26175594198403,0,0,1.12738587736838,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0.810900861160657,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.643105137237198,0,5.0827665835536,1.84130094602871,2.86447756719698,2.40594455281163,5.48066015816514,1.5107877947794,2.02506750069542,3.15224842256954,1.81256963593682,3.10656187051092,0.31136204275253,0.399024873401031,1.02440163452481,0,0.419226325255965,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.960377286073039,0.574354689556133,0,0.811190281613988,0.77163688185482,0.824171801606613,0.147198920134397,1.37147700954166,0.177475806159338,0.715308569841963,0.726732083161643,0.752875043322645,0.507687647350059,0.914639864363863,0.263069711437843,0.271608227691724,1.12228454331548,1.18635018124174,0.591026894253381,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0 | |||
|short_description=p3@Ttll11 | |||
}} |
Revision as of 23:56, 13 September 2013
Short description: | p3@Ttll11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ttll11_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 53bp_to_ENSMUST00000127742_5end |
EntrezGene: | Ttll11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.81e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.81e-18 | 23 |
neuron | 8.27e-13 | 33 |
neuronal stem cell | 8.27e-13 | 33 |
neuroblast | 8.27e-13 | 33 |
electrically signaling cell | 8.27e-13 | 33 |
electrically responsive cell | 3.76e-10 | 39 |
electrically active cell | 3.76e-10 | 39 |
neural cell | 8.39e-09 | 43 |
ectodermal cell | 1.66e-08 | 44 |
neurectodermal cell | 1.66e-08 | 44 |
neuron of the ventral spinal cord | 2.89e-07 | 3 |
neuron of cerebral cortex | 3.02e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.