FFCP PHASE1:Mm9::chr4:128799308..128799339,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15444|HGNC=|MCL_coexpression_id=935|UniProt=P84075|association_with_transcript=-28bp_to_ENSMUST00000116444_5end|description=CAGE_peak_3_at_Hpca_5end|id=chr4:128799308..128799339,-|ontology_enrichment_celltype=CL:0000117!2.98e-17!23;CL:0000337!2.98e-17!23;CL:0000540!5.21e-10!33;CL:0000047!5.21e-10!33;CL:0000031!5.21e-10!33;CL:0000404!5.21e-10!33;CL:0000393!1.55e-07!39;CL:0000211!1.55e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-11,23;CL:0000337,1.07e-11,23;CL:0002610,2.75e-09,3;CL:0002614,7.35e-09,3;CL:0000540,1.72e-07,33;CL:0000047,1.72e-07,33;CL:0000031,1.72e-07,33;CL:0000404,1.72e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.12e-26!52;UBERON:0005068!3.12e-26!52;UBERON:0006241!3.12e-26!52;UBERON:0007135!3.12e-26!52;UBERON:0002020!3.76e-25!34;UBERON:0000955!7.19e-25!50;UBERON:0006238!7.19e-25!50;UBERON:0000033!1.89e-24!63;UBERON:0001017!4.20e-24!73;UBERON:0005743!4.20e-24!73;UBERON:0002616!5.53e-24!49;UBERON:0000073!4.75e-23!75;UBERON:0001016!4.75e-23!75;UBERON:0002346!3.14e-21!71;UBERON:0003075!3.14e-21!71;UBERON:0007284!3.14e-21!71;UBERON:0003056!1.25e-20!49;UBERON:0002791!1.51e-20!29;UBERON:0003528!1.51e-20!29;UBERON:0001893!1.51e-20!29;UBERON:0003080!6.70e-20!40;UBERON:0002780!9.29e-19!39;UBERON:0001890!9.29e-19!39;UBERON:0006240!9.29e-19!39;UBERON:0004121!2.74e-18!102;UBERON:0000924!2.74e-18!102;UBERON:0006601!2.74e-18!102;UBERON:0007811!6.27e-15!86;UBERON:0000956!7.43e-15!21;UBERON:0001869!7.43e-15!21;UBERON:0000203!7.43e-15!21;UBERON:0000153!1.65e-12!94;UBERON:0002021!4.62e-12!10;UBERON:0000411!4.62e-12!10;UBERON:0001950!4.62e-12!10;UBERON:0002619!7.62e-12!17;UBERON:0002298!3.09e-08!6;UBERON:0000025!5.44e-07!114;UBERON:0002240!5.82e-07!6;UBERON:0005174!5.82e-07!6;UBERON:0001137!5.82e-07!6;UBERON:0002420!7.36e-07!8;UBERON:0007245!7.36e-07!8;UBERON:0010009!7.36e-07!8;UBERON:0010011!7.36e-07!8;UBERON:0000454!7.36e-07!8;UBERON:0003076!7.41e-07!12;UBERON:0003057!7.41e-07!12;UBERON:0004111!9.74e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-41,54;UBERON:0001049,1.52e-36,52;UBERON:0005068,1.52e-36,52;UBERON:0006241,1.52e-36,52;UBERON:0007135,1.52e-36,52;UBERON:0001017,3.01e-33,73;UBERON:0001016,3.42e-32,75;UBERON:0002020,3.57e-32,34;UBERON:0002346,1.46e-28,64;UBERON:0003075,1.46e-28,64;UBERON:0007284,1.46e-28,64;UBERON:0002616,7.54e-28,46;UBERON:0000955,3.84e-27,47;UBERON:0006238,3.84e-27,47;UBERON:0003528,1.98e-25,29;UBERON:0002791,1.98e-25,29;UBERON:0001893,1.98e-25,29;UBERON:0003080,1.20e-24,40;UBERON:0002021,2.60e-24,10;UBERON:0000411,2.60e-24,10;UBERON:0001950,2.60e-24,10;UBERON:0010371,2.71e-24,73;UBERON:0004121,4.51e-24,95;UBERON:0000924,4.51e-24,95;UBERON:0006601,4.51e-24,95;UBERON:0002780,1.33e-22,39;UBERON:0001890,1.33e-22,39;UBERON:0006240,1.33e-22,39;UBERON:0002619,9.68e-20,17;UBERON:0003056,3.09e-19,49;UBERON:0000956,2.42e-18,21;UBERON:0001869,2.42e-18,21;UBERON:0000203,2.42e-18,21;UBERON:0010314,5.13e-18,92;UBERON:0000025,2.36e-13,114;UBERON:0003076,3.59e-12,12;UBERON:0003057,3.59e-12,12;UBERON:0004111,4.49e-12,122;UBERON:0002950,1.46e-11,4;UBERON:0001891,1.46e-11,4;UBERON:0009616,1.46e-11,4;UBERON:0010286,1.46e-11,4;UBERON:0002240,2.57e-10,6;UBERON:0005174,2.57e-10,6;UBERON:0001137,2.57e-10,6;UBERON:0004684,2.75e-09,3;UBERON:0002275,2.75e-09,3;UBERON:0002038,7.35e-09,3;UBERON:0009663,7.35e-09,3;UBERON:0009661,7.35e-09,3;UBERON:0000125,7.35e-09,3;UBERON:0002308,7.35e-09,3;UBERON:0011216,2.02e-08,194;UBERON:0002420,3.79e-08,8;UBERON:0007245,3.79e-08,8;UBERON:0010009,3.79e-08,8;UBERON:0010011,3.79e-08,8;UBERON:0000454,3.79e-08,8;UBERON:0001948,5.57e-08,5;UBERON:0002315,5.57e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.420649922702764,2.57085885963423,2.65042249141936,0.367472397644862,0.191690942036473,0,7.70811166995721,4.21368215681119,6.75868746327471,0.131886287730194,0.914876436024097,0,4.18774498502071,6.19038871034848,4.27835093775068,1.17851434189467,2.27794689278565,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,8.38827580667007,5.49000723382352,1.00523481690292,4.17178368461463,6.39288643325826,4.77912502486988,3.73154905055843,0,0,0,0.210441855886474,0,0,0,0,0.340182495756639,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5010244963616,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.81651769963376,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,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| ||
|EntrezGene=15444 | |||
|HGNC= | |||
|MCL_coexpression_id=935 | |||
|UniProt=P84075 | |||
|association_with_transcript=-28bp_to_ENSMUST00000116444_5end | |||
|description=CAGE_peak_3_at_Hpca_5end | |||
|id=chr4:128799308..128799339,- | |||
|ontology_enrichment_celltype=CL:0000117!2.98e-17!23;CL:0000337!2.98e-17!23;CL:0000540!5.21e-10!33;CL:0000047!5.21e-10!33;CL:0000031!5.21e-10!33;CL:0000404!5.21e-10!33;CL:0000393!1.55e-07!39;CL:0000211!1.55e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-11,23;CL:0000337,1.07e-11,23;CL:0002610,2.75e-09,3;CL:0002614,7.35e-09,3;CL:0000540,1.72e-07,33;CL:0000047,1.72e-07,33;CL:0000031,1.72e-07,33;CL:0000404,1.72e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.12e-26!52;UBERON:0005068!3.12e-26!52;UBERON:0006241!3.12e-26!52;UBERON:0007135!3.12e-26!52;UBERON:0002020!3.76e-25!34;UBERON:0000955!7.19e-25!50;UBERON:0006238!7.19e-25!50;UBERON:0000033!1.89e-24!63;UBERON:0001017!4.20e-24!73;UBERON:0005743!4.20e-24!73;UBERON:0002616!5.53e-24!49;UBERON:0000073!4.75e-23!75;UBERON:0001016!4.75e-23!75;UBERON:0002346!3.14e-21!71;UBERON:0003075!3.14e-21!71;UBERON:0007284!3.14e-21!71;UBERON:0003056!1.25e-20!49;UBERON:0002791!1.51e-20!29;UBERON:0003528!1.51e-20!29;UBERON:0001893!1.51e-20!29;UBERON:0003080!6.70e-20!40;UBERON:0002780!9.29e-19!39;UBERON:0001890!9.29e-19!39;UBERON:0006240!9.29e-19!39;UBERON:0004121!2.74e-18!102;UBERON:0000924!2.74e-18!102;UBERON:0006601!2.74e-18!102;UBERON:0007811!6.27e-15!86;UBERON:0000956!7.43e-15!21;UBERON:0001869!7.43e-15!21;UBERON:0000203!7.43e-15!21;UBERON:0000153!1.65e-12!94;UBERON:0002021!4.62e-12!10;UBERON:0000411!4.62e-12!10;UBERON:0001950!4.62e-12!10;UBERON:0002619!7.62e-12!17;UBERON:0002298!3.09e-08!6;UBERON:0000025!5.44e-07!114;UBERON:0002240!5.82e-07!6;UBERON:0005174!5.82e-07!6;UBERON:0001137!5.82e-07!6;UBERON:0002420!7.36e-07!8;UBERON:0007245!7.36e-07!8;UBERON:0010009!7.36e-07!8;UBERON:0010011!7.36e-07!8;UBERON:0000454!7.36e-07!8;UBERON:0003076!7.41e-07!12;UBERON:0003057!7.41e-07!12;UBERON:0004111!9.74e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-41,54;UBERON:0001049,1.52e-36,52;UBERON:0005068,1.52e-36,52;UBERON:0006241,1.52e-36,52;UBERON:0007135,1.52e-36,52;UBERON:0001017,3.01e-33,73;UBERON:0001016,3.42e-32,75;UBERON:0002020,3.57e-32,34;UBERON:0002346,1.46e-28,64;UBERON:0003075,1.46e-28,64;UBERON:0007284,1.46e-28,64;UBERON:0002616,7.54e-28,46;UBERON:0000955,3.84e-27,47;UBERON:0006238,3.84e-27,47;UBERON:0003528,1.98e-25,29;UBERON:0002791,1.98e-25,29;UBERON:0001893,1.98e-25,29;UBERON:0003080,1.20e-24,40;UBERON:0002021,2.60e-24,10;UBERON:0000411,2.60e-24,10;UBERON:0001950,2.60e-24,10;UBERON:0010371,2.71e-24,73;UBERON:0004121,4.51e-24,95;UBERON:0000924,4.51e-24,95;UBERON:0006601,4.51e-24,95;UBERON:0002780,1.33e-22,39;UBERON:0001890,1.33e-22,39;UBERON:0006240,1.33e-22,39;UBERON:0002619,9.68e-20,17;UBERON:0003056,3.09e-19,49;UBERON:0000956,2.42e-18,21;UBERON:0001869,2.42e-18,21;UBERON:0000203,2.42e-18,21;UBERON:0010314,5.13e-18,92;UBERON:0000025,2.36e-13,114;UBERON:0003076,3.59e-12,12;UBERON:0003057,3.59e-12,12;UBERON:0004111,4.49e-12,122;UBERON:0002950,1.46e-11,4;UBERON:0001891,1.46e-11,4;UBERON:0009616,1.46e-11,4;UBERON:0010286,1.46e-11,4;UBERON:0002240,2.57e-10,6;UBERON:0005174,2.57e-10,6;UBERON:0001137,2.57e-10,6;UBERON:0004684,2.75e-09,3;UBERON:0002275,2.75e-09,3;UBERON:0002038,7.35e-09,3;UBERON:0009663,7.35e-09,3;UBERON:0009661,7.35e-09,3;UBERON:0000125,7.35e-09,3;UBERON:0002308,7.35e-09,3;UBERON:0011216,2.02e-08,194;UBERON:0002420,3.79e-08,8;UBERON:0007245,3.79e-08,8;UBERON:0010009,3.79e-08,8;UBERON:0010011,3.79e-08,8;UBERON:0000454,3.79e-08,8;UBERON:0001948,5.57e-08,5;UBERON:0002315,5.57e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.420649922702764,2.57085885963423,2.65042249141936,0.367472397644862,0.191690942036473,0,7.70811166995721,4.21368215681119,6.75868746327471,0.131886287730194,0.914876436024097,0,4.18774498502071,6.19038871034848,4.27835093775068,1.17851434189467,2.27794689278565,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,8.38827580667007,5.49000723382352,1.00523481690292,4.17178368461463,6.39288643325826,4.77912502486988,3.73154905055843,0,0,0,0.210441855886474,0,0,0,0,0.340182495756639,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5010244963616,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.81651769963376,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,5.37733375830478,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,3.22227665555024,1.71868654031819,1.03111909406213,2.74033007908257,3.7769694869485,5.40018000185445,4.5032120322422,4.98456649882625,6.21312374102184,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.229741875822453,0,0,0,0,0.294397840268795,0,0,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0,1.49886346762768,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Hpca | |||
}} |
Revision as of 03:50, 14 September 2013
Short description: | p3@Hpca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hpca_5end |
Coexpression cluster: | MCL_coexpression_mm9:935 |
Association with transcript: | -28bp_to_ENSMUST00000116444_5end |
EntrezGene: | Hpca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.07e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-11 | 23 |
raphe nuclei neuron | 2.75e-09 | 3 |
neuron of the substantia nigra | 7.35e-09 | 3 |
neuron | 1.72e-07 | 33 |
neuronal stem cell | 1.72e-07 | 33 |
neuroblast | 1.72e-07 | 33 |
electrically signaling cell | 1.72e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.