FFCP PHASE1:Mm9::chr4:58512249..58512260,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14745|HGNC=|MCL_coexpression_id=20|UniProt=P61793|association_with_transcript=-9bp_to_uc008szb.2_5end|description=CAGE_peak_5_at_Lpar1_5end|id=chr4:58512249..58512260,-|ontology_enrichment_celltype=CL:0002610!9.85e-08!3;CL:0002614!1.33e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,1.25e-11,3;CL:0002614,2.02e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.11e-27!50;UBERON:0006238!1.11e-27!50;UBERON:0001017!1.96e-26!73;UBERON:0005743!1.96e-26!73;UBERON:0002616!4.26e-26!49;UBERON:0001049!9.76e-26!52;UBERON:0005068!9.76e-26!52;UBERON:0006241!9.76e-26!52;UBERON:0007135!9.76e-26!52;UBERON:0000073!1.65e-25!75;UBERON:0001016!1.65e-25!75;UBERON:0000033!8.23e-24!63;UBERON:0002346!2.25e-18!71;UBERON:0003075!2.25e-18!71;UBERON:0007284!2.25e-18!71;UBERON:0004121!8.16e-18!102;UBERON:0000924!8.16e-18!102;UBERON:0006601!8.16e-18!102;UBERON:0003080!2.67e-16!40;UBERON:0007811!1.94e-15!86;UBERON:0002780!7.38e-15!39;UBERON:0001890!7.38e-15!39;UBERON:0006240!7.38e-15!39;UBERON:0002298!5.77e-14!6;UBERON:0003056!8.75e-14!49;UBERON:0002020!1.07e-13!34;UBERON:0000153!1.71e-13!94;UBERON:0002791!3.53e-11!29;UBERON:0003528!3.53e-11!29;UBERON:0001893!3.53e-11!29;UBERON:0003076!1.74e-10!12;UBERON:0003057!1.74e-10!12;UBERON:0002950!1.20e-09!4;UBERON:0001891!1.20e-09!4;UBERON:0009616!1.20e-09!4;UBERON:0002021!3.27e-09!10;UBERON:0000411!3.27e-09!10;UBERON:0001950!3.27e-09!10;UBERON:0000025!9.80e-09!114;UBERON:0004111!1.87e-08!122;UBERON:0002619!4.08e-08!17;UBERON:0000956!7.64e-08!21;UBERON:0001869!7.64e-08!21;UBERON:0000203!7.64e-08!21;UBERON:0004684!9.85e-08!3;UBERON:0002275!9.85e-08!3;UBERON:0002038!1.33e-07!3;UBERON:0002308!1.33e-07!3;UBERON:0009663!1.33e-07!3;UBERON:0009661!1.33e-07!3;UBERON:0006331!1.33e-07!3;UBERON:0000125!1.33e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.75e-27,54;UBERON:0000955,8.46e-26,47;UBERON:0006238,8.46e-26,47;UBERON:0001017,1.11e-23,73;UBERON:0002616,1.11e-23,46;UBERON:0001049,3.49e-23,52;UBERON:0005068,3.49e-23,52;UBERON:0006241,3.49e-23,52;UBERON:0007135,3.49e-23,52;UBERON:0001016,6.10e-23,75;UBERON:0002346,3.94e-18,64;UBERON:0003075,3.94e-18,64;UBERON:0007284,3.94e-18,64;UBERON:0004121,3.11e-17,95;UBERON:0000924,3.11e-17,95;UBERON:0006601,3.11e-17,95;UBERON:0003080,2.16e-16,40;UBERON:0010371,1.99e-15,73;UBERON:0002950,9.58e-15,4;UBERON:0001891,9.58e-15,4;UBERON:0009616,9.58e-15,4;UBERON:0010286,9.58e-15,4;UBERON:0002780,1.83e-14,39;UBERON:0001890,1.83e-14,39;UBERON:0006240,1.83e-14,39;UBERON:0003528,1.89e-14,29;UBERON:0002791,1.89e-14,29;UBERON:0001893,1.89e-14,29;UBERON:0003056,7.51e-13,49;UBERON:0002020,5.26e-12,34;UBERON:0004684,1.25e-11,3;UBERON:0002275,1.25e-11,3;UBERON:0010314,1.89e-11,92;UBERON:0002038,2.02e-11,3;UBERON:0009663,2.02e-11,3;UBERON:0009661,2.02e-11,3;UBERON:0000125,2.02e-11,3;UBERON:0002308,2.02e-11,3;UBERON:0002021,5.47e-11,10;UBERON:0000411,5.47e-11,10;UBERON:0001950,5.47e-11,10;UBERON:0004733,6.61e-10,6;UBERON:0004732,6.61e-10,6;UBERON:0002028,6.61e-10,6;UBERON:0007277,6.61e-10,6;UBERON:0000956,8.77e-09,21;UBERON:0001869,8.77e-09,21;UBERON:0000203,8.77e-09,21;UBERON:0001896,1.07e-08,2;UBERON:0002298,1.07e-08,2;UBERON:0005290,1.07e-08,2;UBERON:0010096,1.07e-08,2;UBERON:0002619,1.69e-08,17;UBERON:0000025,1.71e-08,114;UBERON:0004111,1.11e-07,122;UBERON:0007023,1.27e-07,51;UBERON:0003076,1.70e-07,12;UBERON:0003057,1.70e-07,12;UBERON:0002420,2.44e-07,8;UBERON:0007245,2.44e-07,8;UBERON:0010009,2.44e-07,8;UBERON:0010011,2.44e-07,8;UBERON:0000454,2.44e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.883474163806454,0,0,0,11.0115880999389,14.8117312178818,11.366883460962,0,0,0,12.8424179540635,8.4414391504752,9.47349136216223,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,5.65506108396329,0,0,0,0,11.9832511523858,9.15001205637253,0,3.99795936442236,1.53429274398198,18.4931359658008,12.1680947300818,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,30.0229603277171,28.7168632150898,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,33.7474049659128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,1.37016503954128,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,2.5888015587591,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.695603506861264|short_description=p5@Lpar1}} | ||
|EntrezGene=14745 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=P61793 | |||
|association_with_transcript=-9bp_to_uc008szb.2_5end | |||
|description=CAGE_peak_5_at_Lpar1_5end | |||
|id=chr4:58512249..58512260,- | |||
|ontology_enrichment_celltype=CL:0002610!9.85e-08!3;CL:0002614!1.33e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.25e-11,3;CL:0002614,2.02e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.11e-27!50;UBERON:0006238!1.11e-27!50;UBERON:0001017!1.96e-26!73;UBERON:0005743!1.96e-26!73;UBERON:0002616!4.26e-26!49;UBERON:0001049!9.76e-26!52;UBERON:0005068!9.76e-26!52;UBERON:0006241!9.76e-26!52;UBERON:0007135!9.76e-26!52;UBERON:0000073!1.65e-25!75;UBERON:0001016!1.65e-25!75;UBERON:0000033!8.23e-24!63;UBERON:0002346!2.25e-18!71;UBERON:0003075!2.25e-18!71;UBERON:0007284!2.25e-18!71;UBERON:0004121!8.16e-18!102;UBERON:0000924!8.16e-18!102;UBERON:0006601!8.16e-18!102;UBERON:0003080!2.67e-16!40;UBERON:0007811!1.94e-15!86;UBERON:0002780!7.38e-15!39;UBERON:0001890!7.38e-15!39;UBERON:0006240!7.38e-15!39;UBERON:0002298!5.77e-14!6;UBERON:0003056!8.75e-14!49;UBERON:0002020!1.07e-13!34;UBERON:0000153!1.71e-13!94;UBERON:0002791!3.53e-11!29;UBERON:0003528!3.53e-11!29;UBERON:0001893!3.53e-11!29;UBERON:0003076!1.74e-10!12;UBERON:0003057!1.74e-10!12;UBERON:0002950!1.20e-09!4;UBERON:0001891!1.20e-09!4;UBERON:0009616!1.20e-09!4;UBERON:0002021!3.27e-09!10;UBERON:0000411!3.27e-09!10;UBERON:0001950!3.27e-09!10;UBERON:0000025!9.80e-09!114;UBERON:0004111!1.87e-08!122;UBERON:0002619!4.08e-08!17;UBERON:0000956!7.64e-08!21;UBERON:0001869!7.64e-08!21;UBERON:0000203!7.64e-08!21;UBERON:0004684!9.85e-08!3;UBERON:0002275!9.85e-08!3;UBERON:0002038!1.33e-07!3;UBERON:0002308!1.33e-07!3;UBERON:0009663!1.33e-07!3;UBERON:0009661!1.33e-07!3;UBERON:0006331!1.33e-07!3;UBERON:0000125!1.33e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.75e-27,54;UBERON:0000955,8.46e-26,47;UBERON:0006238,8.46e-26,47;UBERON:0001017,1.11e-23,73;UBERON:0002616,1.11e-23,46;UBERON:0001049,3.49e-23,52;UBERON:0005068,3.49e-23,52;UBERON:0006241,3.49e-23,52;UBERON:0007135,3.49e-23,52;UBERON:0001016,6.10e-23,75;UBERON:0002346,3.94e-18,64;UBERON:0003075,3.94e-18,64;UBERON:0007284,3.94e-18,64;UBERON:0004121,3.11e-17,95;UBERON:0000924,3.11e-17,95;UBERON:0006601,3.11e-17,95;UBERON:0003080,2.16e-16,40;UBERON:0010371,1.99e-15,73;UBERON:0002950,9.58e-15,4;UBERON:0001891,9.58e-15,4;UBERON:0009616,9.58e-15,4;UBERON:0010286,9.58e-15,4;UBERON:0002780,1.83e-14,39;UBERON:0001890,1.83e-14,39;UBERON:0006240,1.83e-14,39;UBERON:0003528,1.89e-14,29;UBERON:0002791,1.89e-14,29;UBERON:0001893,1.89e-14,29;UBERON:0003056,7.51e-13,49;UBERON:0002020,5.26e-12,34;UBERON:0004684,1.25e-11,3;UBERON:0002275,1.25e-11,3;UBERON:0010314,1.89e-11,92;UBERON:0002038,2.02e-11,3;UBERON:0009663,2.02e-11,3;UBERON:0009661,2.02e-11,3;UBERON:0000125,2.02e-11,3;UBERON:0002308,2.02e-11,3;UBERON:0002021,5.47e-11,10;UBERON:0000411,5.47e-11,10;UBERON:0001950,5.47e-11,10;UBERON:0004733,6.61e-10,6;UBERON:0004732,6.61e-10,6;UBERON:0002028,6.61e-10,6;UBERON:0007277,6.61e-10,6;UBERON:0000956,8.77e-09,21;UBERON:0001869,8.77e-09,21;UBERON:0000203,8.77e-09,21;UBERON:0001896,1.07e-08,2;UBERON:0002298,1.07e-08,2;UBERON:0005290,1.07e-08,2;UBERON:0010096,1.07e-08,2;UBERON:0002619,1.69e-08,17;UBERON:0000025,1.71e-08,114;UBERON:0004111,1.11e-07,122;UBERON:0007023,1.27e-07,51;UBERON:0003076,1.70e-07,12;UBERON:0003057,1.70e-07,12;UBERON:0002420,2.44e-07,8;UBERON:0007245,2.44e-07,8;UBERON:0010009,2.44e-07,8;UBERON:0010011,2.44e-07,8;UBERON:0000454,2.44e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.883474163806454,0,0,0,11.0115880999389,14.8117312178818,11.366883460962,0,0,0,12.8424179540635,8.4414391504752,9.47349136216223,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,5.65506108396329,0,0,0,0,11.9832511523858,9.15001205637253,0,3.99795936442236,1.53429274398198,18.4931359658008,12.1680947300818,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,30.0229603277171,28.7168632150898,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,33.7474049659128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,1.37016503954128,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,2.5888015587591,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.695603506861264 | |||
|short_description=p5@Lpar1 | |||
}} |
Revision as of 05:17, 14 September 2013
Short description: | p5@Lpar1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lpar1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -9bp_to_uc008szb.2_5end |
EntrezGene: | Lpar1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.25e-11 | 3 |
neuron of the substantia nigra | 2.02e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.