FFCP PHASE1:Hg19::chrX:110187546..110187557,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5063|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8592|TSSclassifier=S|UniProt=B2RCU6,O75914|association_with_transcript=33bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_10_at_PAK3_5end|id=chrX:110187546..110187557,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;1.12e-11;5!CL:0000540;6.74e-10;6!CL:0000404;6.74e-10;6|ontology_enrichment_celltype_v019_2=CL:0000540,6.85e-10,6;CL:0000031,6.85e-10,6;CL:0000404,6.85e-10,6;CL:0000047,1.58e-07,8|ontology_enrichment_development_v019=CL:0000031;6.74e-10;6!UBERON:0006601;2.11e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;8.20e-10;6|ontology_enrichment_disease_v019_2=DOID:169,7.27e-10,6|ontology_enrichment_uberon=UBERON:0001049!1.58e-62!57;UBERON:0005068!1.58e-62!57;UBERON:0006241!1.58e-62!57;UBERON:0007135!1.58e-62!57;UBERON:0001017!2.02e-58!82;UBERON:0000073!3.02e-57!94;UBERON:0001016!3.02e-57!94;UBERON:0005743!3.59e-57!86;UBERON:0007023!2.52e-54!115;UBERON:0002780!1.28e-52!41;UBERON:0001890!1.28e-52!41;UBERON:0006240!1.28e-52!41;UBERON:0002616!4.88e-52!59;UBERON:0002020!3.89e-51!34;UBERON:0003528!3.89e-51!34;UBERON:0003080!4.13e-51!42;UBERON:0001893!1.64e-50!34;UBERON:0003075!5.04e-50!86;UBERON:0007284!5.04e-50!86;UBERON:0002791!5.95e-49!33;UBERON:0000955!2.00e-48!69;UBERON:0006238!2.00e-48!69;UBERON:0001869!1.04e-47!32;UBERON:0002346!4.48e-47!90;UBERON:0000956!8.75e-40!25;UBERON:0000203!8.75e-40!25;UBERON:0002619!1.06e-38!22;UBERON:0003056!1.82e-37!61;UBERON:0001950!6.13e-35!20;UBERON:0004121!9.99e-35!169;UBERON:0000924!1.76e-33!173;UBERON:0006601!1.76e-33!173;UBERON:0000153!1.90e-31!129;UBERON:0007811!1.90e-31!129;UBERON:0000033!9.66e-30!123;UBERON:0000025!9.64e-16!194;UBERON:0004111!2.45e-14!241;UBERON:0000477!3.68e-13!286;UBERON:0002308!1.27e-12!9;UBERON:0000125!1.27e-12!9;UBERON:0002420!1.69e-12!9;UBERON:0007245!1.69e-12!9;UBERON:0010009!1.69e-12!9;UBERON:0010011!1.69e-12!9;UBERON:0000454!1.69e-12!9;UBERON:0003076!1.89e-12!15;UBERON:0003057!1.89e-12!15;UBERON:0000922!5.16e-12!612;UBERON:0001871!7.02e-12!7;UBERON:0000200!1.18e-11!6;UBERON:0000483!2.23e-11!309;UBERON:0000119!4.22e-11!312;UBERON:0000475!8.44e-11!365;UBERON:0002021!8.96e-11!5;UBERON:0002298!1.38e-10!8;UBERON:0001872!1.77e-10!5;UBERON:0000349!1.87e-10!5;UBERON:0000468!2.09e-10!659;UBERON:0002050!1.35e-09!605;UBERON:0005423!1.35e-09!605;UBERON:0000062!1.37e-09!511;UBERON:0000064!2.48e-09!219;UBERON:0009663!3.72e-09!7;UBERON:0000481!4.06e-09!347;UBERON:0000923!4.23e-09!604;UBERON:0005291!4.23e-09!604;UBERON:0006598!4.23e-09!604;UBERON:0002532!4.23e-09!604;UBERON:0004733!1.18e-08!12;UBERON:0002028!1.18e-08!12;UBERON:0007277!1.18e-08!12;UBERON:0000467!1.90e-08!625;UBERON:0000480!2.16e-08!626;UBERON:0004732!7.20e-08!13;UBERON:0002771!6.20e-07!3;UBERON:0000988!7.82e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;3.01e-72;22!UBERON:0000956;2.71e-71;25!UBERON:0000203;2.71e-71;25!UBERON:0001950;1.79e-61;20!UBERON:0003528;7.80e-53;34!UBERON:0002020;7.80e-53;34!UBERON:0002791;1.24e-49;32!UBERON:0001869;1.55e-49;32!UBERON:0001893;4.27e-44;34!UBERON:0002780;1.40e-40;41!UBERON:0001890;1.40e-40;41!UBERON:0000073;1.63e-28;53!UBERON:0002616;1.63e-28;53!UBERON:0002021;7.18e-20;5!UBERON:0001872;8.12e-20;5!UBERON:0001016;2.90e-14;83!UBERON:0001017;3.22e-14;75!UBERON:0001871;4.94e-14;6!UBERON:0000007;8.57e-14;2!UBERON:0000955;2.00e-13;68!UBERON:0001954;2.90e-13;2!UBERON:0003022;2.90e-13;2!UBERON:0002421;2.90e-13;2!UBERON:0002600;2.90e-13;2!UBERON:0002148;4.06e-13;2!UBERON:0006331;4.06e-13;2!UBERON:0009662;4.06e-13;2!UBERON:0002771;8.45e-13;2!UBERON:0000013;1.12e-11;5!UBERON:0002410;1.12e-11;5!UBERON:0000349;1.73e-11;5!UBERON:0000200;1.97e-09;6!UBERON:0000988;4.87e-09;3!UBERON:0001870;7.90e-09;3!UBERON:0007023;1.41e-07;114!UBERON:0003112;1.47e-07;1!UBERON:0011158;1.47e-07;1!UBERON:0003128;1.47e-07;1!UBERON:0001703;1.47e-07;1!UBERON:0002241;1.47e-07;1!UBERON:0011216;1.74e-07;132!UBERON:0003296;2.58e-07;4!UBERON:0010133;2.58e-07;4!UBERON:0002022;3.10e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.91e-72,22;UBERON:0000956,2.92e-71,25;UBERON:0000203,2.92e-71,25;UBERON:0003528,1.27e-64,34;UBERON:0002020,1.27e-64,34;UBERON:0001950,2.11e-61,20;UBERON:0002791,2.27e-55,32;UBERON:0001869,2.27e-55,32;UBERON:0002780,1.53e-53,41;UBERON:0001890,1.53e-53,41;UBERON:0003080,1.53e-53,41;UBERON:0006240,1.53e-53,41;UBERON:0001893,5.37e-52,34;UBERON:0001016,2.84e-50,89;UBERON:0000073,9.43e-50,53;UBERON:0002616,9.43e-50,53;UBERON:0001049,6.70e-47,56;UBERON:0005068,6.70e-47,56;UBERON:0006241,6.70e-47,56;UBERON:0007135,6.70e-47,56;UBERON:0001017,2.20e-44,81;UBERON:0000955,2.31e-37,68;UBERON:0006238,2.31e-37,68;UBERON:0003056,6.02e-35,61;UBERON:0003075,8.24e-31,82;UBERON:0007284,8.24e-31,82;UBERON:0002346,3.46e-29,86;UBERON:0004121,4.54e-24,171;UBERON:0000924,4.54e-24,171;UBERON:0006601,4.54e-24,171;UBERON:001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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8592 | |||
|TSSclassifier=S | |||
|UniProt=B2RCU6,O75914 | |||
|association_with_transcript=33bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_PAK3_5end | |||
|id=chrX:110187546..110187557,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.12e-11;5!CL:0000540;6.74e-10;6!CL:0000404;6.74e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.85e-10,6;CL:0000031,6.85e-10,6;CL:0000404,6.85e-10,6;CL:0000047,1.58e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;6.74e-10;6!UBERON:0006601;2.11e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.20e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.27e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.58e-62!57;UBERON:0005068!1.58e-62!57;UBERON:0006241!1.58e-62!57;UBERON:0007135!1.58e-62!57;UBERON:0001017!2.02e-58!82;UBERON:0000073!3.02e-57!94;UBERON:0001016!3.02e-57!94;UBERON:0005743!3.59e-57!86;UBERON:0007023!2.52e-54!115;UBERON:0002780!1.28e-52!41;UBERON:0001890!1.28e-52!41;UBERON:0006240!1.28e-52!41;UBERON:0002616!4.88e-52!59;UBERON:0002020!3.89e-51!34;UBERON:0003528!3.89e-51!34;UBERON:0003080!4.13e-51!42;UBERON:0001893!1.64e-50!34;UBERON:0003075!5.04e-50!86;UBERON:0007284!5.04e-50!86;UBERON:0002791!5.95e-49!33;UBERON:0000955!2.00e-48!69;UBERON:0006238!2.00e-48!69;UBERON:0001869!1.04e-47!32;UBERON:0002346!4.48e-47!90;UBERON:0000956!8.75e-40!25;UBERON:0000203!8.75e-40!25;UBERON:0002619!1.06e-38!22;UBERON:0003056!1.82e-37!61;UBERON:0001950!6.13e-35!20;UBERON:0004121!9.99e-35!169;UBERON:0000924!1.76e-33!173;UBERON:0006601!1.76e-33!173;UBERON:0000153!1.90e-31!129;UBERON:0007811!1.90e-31!129;UBERON:0000033!9.66e-30!123;UBERON:0000025!9.64e-16!194;UBERON:0004111!2.45e-14!241;UBERON:0000477!3.68e-13!286;UBERON:0002308!1.27e-12!9;UBERON:0000125!1.27e-12!9;UBERON:0002420!1.69e-12!9;UBERON:0007245!1.69e-12!9;UBERON:0010009!1.69e-12!9;UBERON:0010011!1.69e-12!9;UBERON:0000454!1.69e-12!9;UBERON:0003076!1.89e-12!15;UBERON:0003057!1.89e-12!15;UBERON:0000922!5.16e-12!612;UBERON:0001871!7.02e-12!7;UBERON:0000200!1.18e-11!6;UBERON:0000483!2.23e-11!309;UBERON:0000119!4.22e-11!312;UBERON:0000475!8.44e-11!365;UBERON:0002021!8.96e-11!5;UBERON:0002298!1.38e-10!8;UBERON:0001872!1.77e-10!5;UBERON:0000349!1.87e-10!5;UBERON:0000468!2.09e-10!659;UBERON:0002050!1.35e-09!605;UBERON:0005423!1.35e-09!605;UBERON:0000062!1.37e-09!511;UBERON:0000064!2.48e-09!219;UBERON:0009663!3.72e-09!7;UBERON:0000481!4.06e-09!347;UBERON:0000923!4.23e-09!604;UBERON:0005291!4.23e-09!604;UBERON:0006598!4.23e-09!604;UBERON:0002532!4.23e-09!604;UBERON:0004733!1.18e-08!12;UBERON:0002028!1.18e-08!12;UBERON:0007277!1.18e-08!12;UBERON:0000467!1.90e-08!625;UBERON:0000480!2.16e-08!626;UBERON:0004732!7.20e-08!13;UBERON:0002771!6.20e-07!3;UBERON:0000988!7.82e-07!3 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,2.51274398001523,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.221158519862449,0.295547618953547,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0.789168805698781,0,9.1821828489147,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,1.32952671507345,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,1.77064427945048,0,0.275078873194468,0,0,0,1.33649024647654,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58565912723101,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.83039397352945,1.001527445652,0.573409195690071,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19735928259129,1.83302179374359,0,2.07498312564826,0,0,0,0,0,0,0,0,0,0.770750701157514,2.8339315265117,1.27707087245721,1.64093091392604,10.3349395450904,0.96820153449905,2.42213468447777,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0.472763092328763,2.34323429584154,1.03343398250592,1.07806877329642,9.84554656232795,0,0,0,0,0,0,4.24875922965642,3.64259506162076,0,0,0,0.679697329768317,0.657727735628491,0,0,0.235479278551542,0.942693539496011,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,10.5272758557948,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0.735444965261716,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.339957450954573,9.16336449714793,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0.310298987585686,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,1.0820016907288,0.606351566874658,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p10@PAK3 | |||
}} |
Revision as of 10:25, 14 September 2013
Short description: | p10@PAK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PAK3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 33bp_to_ENST00000425146, ENST00000446737, NM_001128166, NM_001128167, uc010npt.1, uc010npu.1_5end |
EntrezGene: | PAK3 |
HGNC: | 8592 |
UniProt: | B2RCU6O75914 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.85e-10 | 6 |
neuroblast | 6.85e-10 | 6 |
electrically signaling cell | 6.85e-10 | 6 |
neuronal stem cell | 1.58e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.27e-10 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.