FFCP PHASE1:Mm9::chrX:58438692..58438738,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=39|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:58438692..58438738,+|id=chrX:58438692..58438738,+|ontology_enrichment_celltype=CL:0000117!1.26e-14!23;CL:0000337!1.26e-14!23;CL:0000540!1.50e-08!33;CL:0000047!1.50e-08!33;CL:0000031!1.50e-08!33;CL:0000404!1.50e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.46e-10,23;CL:0000337,9.46e-10,23;CL:0002610,7.73e-08,3;CL:0002612,1.12e-07,3;CL:0002614,3.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.61e-30!52;UBERON:0005068!3.61e-30!52;UBERON:0006241!3.61e-30!52;UBERON:0007135!3.61e-30!52;UBERON:0000955!3.44e-28!50;UBERON:0006238!3.44e-28!50;UBERON:0002616!4.91e-27!49;UBERON:0000033!1.22e-26!63;UBERON:0001017!2.88e-26!73;UBERON:0005743!2.88e-26!73;UBERON:0002020!4.19e-26!34;UBERON:0000073!3.48e-25!75;UBERON:0001016!3.48e-25!75;UBERON:0002346!5.88e-25!71;UBERON:0003075!5.88e-25!71;UBERON:0007284!5.88e-25!71;UBERON:0003056!1.51e-21!49;UBERON:0002791!9.49e-21!29;UBERON:0003528!9.49e-21!29;UBERON:0001893!9.49e-21!29;UBERON:0003080!2.06e-20!40;UBERON:0004121!1.16e-19!102;UBERON:0000924!1.16e-19!102;UBERON:0006601!1.16e-19!102;UBERON:0002780!2.74e-19!39;UBERON:0001890!2.74e-19!39;UBERON:0006240!2.74e-19!39;UBERON:0007811!5.18e-16!86;UBERON:0000956!6.88e-15!21;UBERON:0001869!6.88e-15!21;UBERON:0000203!6.88e-15!21;UBERON:0002021!2.37e-14!10;UBERON:0000411!2.37e-14!10;UBERON:0001950!2.37e-14!10;UBERON:0000153!1.40e-13!94;UBERON:0002619!6.80e-12!17;UBERON:0003076!2.71e-10!12;UBERON:0003057!2.71e-10!12;UBERON:0002298!3.92e-08!6;UBERON:0002240!6.03e-08!6;UBERON:0005174!6.03e-08!6;UBERON:0001137!6.03e-08!6;UBERON:0000025!6.98e-08!114;UBERON:0002420!5.00e-07!8;UBERON:0007245!5.00e-07!8;UBERON:0010009!5.00e-07!8;UBERON:0010011!5.00e-07!8;UBERON:0000454!5.00e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.74e-39,54;UBERON:0001049,1.33e-35,52;UBERON:0005068,1.33e-35,52;UBERON:0006241,1.33e-35,52;UBERON:0007135,1.33e-35,52;UBERON:0001017,1.35e-31,73;UBERON:0001016,1.46e-30,75;UBERON:0002346,1.06e-29,64;UBERON:0003075,1.06e-29,64;UBERON:0007284,1.06e-29,64;UBERON:0000955,3.60e-29,47;UBERON:0006238,3.60e-29,47;UBERON:0002020,4.42e-29,34;UBERON:0002616,2.03e-27,46;UBERON:0010371,3.49e-25,73;UBERON:0002021,1.41e-24,10;UBERON:0000411,1.41e-24,10;UBERON:0001950,1.41e-24,10;UBERON:0004121,3.51e-24,95;UBERON:0000924,3.51e-24,95;UBERON:0006601,3.51e-24,95;UBERON:0003528,6.65e-23,29;UBERON:0002791,6.65e-23,29;UBERON:0001893,6.65e-23,29;UBERON:0003080,1.24e-21,40;UBERON:0002780,6.03e-20,39;UBERON:0001890,6.03e-20,39;UBERON:0006240,6.03e-20,39;UBERON:0010314,1.51e-18,92;UBERON:0003056,1.72e-18,49;UBERON:0002619,3.09e-16,17;UBERON:0000956,4.10e-15,21;UBERON:0001869,4.10e-15,21;UBERON:0000203,4.10e-15,21;UBERON:0003076,4.93e-15,12;UBERON:0003057,4.93e-15,12;UBERON:0000025,1.57e-12,114;UBERON:0004111,2.91e-11,122;UBERON:0002240,1.15e-09,6;UBERON:0005174,1.15e-09,6;UBERON:0001137,1.15e-09,6;UBERON:0002950,2.41e-09,4;UBERON:0001891,2.41e-09,4;UBERON:0009616,2.41e-09,4;UBERON:0010286,2.41e-09,4;UBERON:0002420,4.74e-09,8;UBERON:0007245,4.74e-09,8;UBERON:0010009,4.74e-09,8;UBERON:0010011,4.74e-09,8;UBERON:0000454,4.74e-09,8;UBERON:0004684,7.73e-08,3;UBERON:0002275,7.73e-08,3;UBERON:0002257,1.12e-07,3;UBERON:0001948,1.77e-07,5;UBERON:0002315,1.77e-07,5;UBERON:0011216,2.81e-07,194;UBERON:0002038,3.52e-07,3;UBERON:0009663,3.52e-07,3;UBERON:0009661,3.52e-07,3;UBERON:0000125,3.52e-07,3;UBERON:0002308,3.52e-07,3;UBERON:0004733,5.22e-07,6;UBERON:0004732,5.22e-07,6;UBERON:0002028,5.22e-07,6;UBERON:0007277,5.22e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,0,0.383381884072945,0,5.50579404996943,9.3211756802187,9.98442466165583,0,0.365950574409639,1.04182674111352,3.90856198601933,3.93933827022176,4.43114918552749,14.7314292736834,8.25755748634797,2.23679334990361,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.4986684682817,22.6202443358531,0,0,0,0,9.73639156131348,2.74500361691176,1.13088916901578,8.69121600961382,6.39288643325826,4.98691306942944,2.59586020908412,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.340182495756639,0,0.281105173679186,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,6.32943107597897,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,14.8340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,12.9892923801925,9.66682996665071,13.1765968091061,25.7779773515531,9.59115527678899,15.8632718451837,12.8254275044043,16.6618845192962,18.1256963593682,12.9440077937955,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.77163688185482,0.412085900803307,0,0,1.06485483695602,0.238436189947321,0.145346416632329,0,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,1.22769312950907,0.464810523557898,0,0.999242311751784,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chrX:58438692..58438738,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:58438692..58438738,+ | |||
|id=chrX:58438692..58438738,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.26e-14!23;CL:0000337!1.26e-14!23;CL:0000540!1.50e-08!33;CL:0000047!1.50e-08!33;CL:0000031!1.50e-08!33;CL:0000404!1.50e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.46e-10,23;CL:0000337,9.46e-10,23;CL:0002610,7.73e-08,3;CL:0002612,1.12e-07,3;CL:0002614,3.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.61e-30!52;UBERON:0005068!3.61e-30!52;UBERON:0006241!3.61e-30!52;UBERON:0007135!3.61e-30!52;UBERON:0000955!3.44e-28!50;UBERON:0006238!3.44e-28!50;UBERON:0002616!4.91e-27!49;UBERON:0000033!1.22e-26!63;UBERON:0001017!2.88e-26!73;UBERON:0005743!2.88e-26!73;UBERON:0002020!4.19e-26!34;UBERON:0000073!3.48e-25!75;UBERON:0001016!3.48e-25!75;UBERON:0002346!5.88e-25!71;UBERON:0003075!5.88e-25!71;UBERON:0007284!5.88e-25!71;UBERON:0003056!1.51e-21!49;UBERON:0002791!9.49e-21!29;UBERON:0003528!9.49e-21!29;UBERON:0001893!9.49e-21!29;UBERON:0003080!2.06e-20!40;UBERON:0004121!1.16e-19!102;UBERON:0000924!1.16e-19!102;UBERON:0006601!1.16e-19!102;UBERON:0002780!2.74e-19!39;UBERON:0001890!2.74e-19!39;UBERON:0006240!2.74e-19!39;UBERON:0007811!5.18e-16!86;UBERON:0000956!6.88e-15!21;UBERON:0001869!6.88e-15!21;UBERON:0000203!6.88e-15!21;UBERON:0002021!2.37e-14!10;UBERON:0000411!2.37e-14!10;UBERON:0001950!2.37e-14!10;UBERON:0000153!1.40e-13!94;UBERON:0002619!6.80e-12!17;UBERON:0003076!2.71e-10!12;UBERON:0003057!2.71e-10!12;UBERON:0002298!3.92e-08!6;UBERON:0002240!6.03e-08!6;UBERON:0005174!6.03e-08!6;UBERON:0001137!6.03e-08!6;UBERON:0000025!6.98e-08!114;UBERON:0002420!5.00e-07!8;UBERON:0007245!5.00e-07!8;UBERON:0010009!5.00e-07!8;UBERON:0010011!5.00e-07!8;UBERON:0000454!5.00e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.74e-39,54;UBERON:0001049,1.33e-35,52;UBERON:0005068,1.33e-35,52;UBERON:0006241,1.33e-35,52;UBERON:0007135,1.33e-35,52;UBERON:0001017,1.35e-31,73;UBERON:0001016,1.46e-30,75;UBERON:0002346,1.06e-29,64;UBERON:0003075,1.06e-29,64;UBERON:0007284,1.06e-29,64;UBERON:0000955,3.60e-29,47;UBERON:0006238,3.60e-29,47;UBERON:0002020,4.42e-29,34;UBERON:0002616,2.03e-27,46;UBERON:0010371,3.49e-25,73;UBERON:0002021,1.41e-24,10;UBERON:0000411,1.41e-24,10;UBERON:0001950,1.41e-24,10;UBERON:0004121,3.51e-24,95;UBERON:0000924,3.51e-24,95;UBERON:0006601,3.51e-24,95;UBERON:0003528,6.65e-23,29;UBERON:0002791,6.65e-23,29;UBERON:0001893,6.65e-23,29;UBERON:0003080,1.24e-21,40;UBERON:0002780,6.03e-20,39;UBERON:0001890,6.03e-20,39;UBERON:0006240,6.03e-20,39;UBERON:0010314,1.51e-18,92;UBERON:0003056,1.72e-18,49;UBERON:0002619,3.09e-16,17;UBERON:0000956,4.10e-15,21;UBERON:0001869,4.10e-15,21;UBERON:0000203,4.10e-15,21;UBERON:0003076,4.93e-15,12;UBERON:0003057,4.93e-15,12;UBERON:0000025,1.57e-12,114;UBERON:0004111,2.91e-11,122;UBERON:0002240,1.15e-09,6;UBERON:0005174,1.15e-09,6;UBERON:0001137,1.15e-09,6;UBERON:0002950,2.41e-09,4;UBERON:0001891,2.41e-09,4;UBERON:0009616,2.41e-09,4;UBERON:0010286,2.41e-09,4;UBERON:0002420,4.74e-09,8;UBERON:0007245,4.74e-09,8;UBERON:0010009,4.74e-09,8;UBERON:0010011,4.74e-09,8;UBERON:0000454,4.74e-09,8;UBERON:0004684,7.73e-08,3;UBERON:0002275,7.73e-08,3;UBERON:0002257,1.12e-07,3;UBERON:0001948,1.77e-07,5;UBERON:0002315,1.77e-07,5;UBERON:0011216,2.81e-07,194;UBERON:0002038,3.52e-07,3;UBERON:0009663,3.52e-07,3;UBERON:0009661,3.52e-07,3;UBERON:0000125,3.52e-07,3;UBERON:0002308,3.52e-07,3;UBERON:0004733,5.22e-07,6;UBERON:0004732,5.22e-07,6;UBERON:0002028,5.22e-07,6;UBERON:0007277,5.22e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,0,0.383381884072945,0,5.50579404996943,9.3211756802187,9.98442466165583,0,0.365950574409639,1.04182674111352,3.90856198601933,3.93933827022176,4.43114918552749,14.7314292736834,8.25755748634797,2.23679334990361,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.4986684682817,22.6202443358531,0,0,0,0,9.73639156131348,2.74500361691176,1.13088916901578,8.69121600961382,6.39288643325826,4.98691306942944,2.59586020908412,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.340182495756639,0,0.281105173679186,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,6.32943107597897,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,14.8340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,12.9892923801925,9.66682996665071,13.1765968091061,25.7779773515531,9.59115527678899,15.8632718451837,12.8254275044043,16.6618845192962,18.1256963593682,12.9440077937955,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.77163688185482,0.412085900803307,0,0,1.06485483695602,0.238436189947321,0.145346416632329,0,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,1.22769312950907,0.464810523557898,0,0.999242311751784,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chrX:58438692..58438738,+ | |||
}} |
Revision as of 19:58, 14 September 2013
Short description: | p@chrX:58438692..58438738, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:58438692..58438738, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.46e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.46e-10 | 23 |
raphe nuclei neuron | 7.73e-08 | 3 |
neuron of the ventral spinal cord | 1.12e-07 | 3 |
neuron of the substantia nigra | 3.52e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.