FFCP PHASE1:Hg19::chr12:57943813..57943869,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3798 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6323 | |||
|TSSclassifier=strong | |||
|UniProt=Q12840 | |||
|association_with_transcript=0bp_to_ENST00000286452,NM_004984,uc001sor.1,uc010srr.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_KIF5A_5end | |||
|id=chr12:57943813..57943869,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.11e-09!25;CL:0000133!4.07e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.98e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.99e-11,25;CL:0000133,7.70e-09,59;CL:0000047,1.88e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.66e-13;82!UBERON:0006238;7.19e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!9.41e-08!22;DOID:2994!9.41e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.56e-09;22!DOID:2994;5.56e-09;22!DOID:171;2.14e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.35e-09,22;DOID:2994,3.35e-09,22;DOID:171,1.92e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.88e-46!94;UBERON:0001016!1.88e-46!94;UBERON:0005743!9.39e-45!86;UBERON:0001017!1.06e-44!82;UBERON:0001049!3.26e-37!57;UBERON:0005068!3.26e-37!57;UBERON:0006241!3.26e-37!57;UBERON:0007135!3.26e-37!57;UBERON:0000955!9.83e-37!69;UBERON:0006238!9.83e-37!69;UBERON:0002346!1.27e-33!90;UBERON:0003075!5.34e-32!86;UBERON:0007284!5.34e-32!86;UBERON:0002616!9.59e-32!59;UBERON:0002780!1.43e-28!41;UBERON:0001890!1.43e-28!41;UBERON:0006240!1.43e-28!41;UBERON:0003080!1.98e-28!42;UBERON:0000924!2.37e-28!173;UBERON:0006601!2.37e-28!173;UBERON:0004121!7.91e-27!169;UBERON:0001893!2.81e-24!34;UBERON:0002020!2.89e-24!34;UBERON:0003528!2.89e-24!34;UBERON:0007023!7.50e-24!115;UBERON:0003056!1.11e-23!61;UBERON:0002791!1.42e-23!33;UBERON:0001869!4.07e-23!32;UBERON:0000153!3.26e-22!129;UBERON:0007811!3.26e-22!129;UBERON:0000033!6.31e-22!123;UBERON:0000956!2.42e-18!25;UBERON:0000203!2.42e-18!25;UBERON:0002619!2.72e-17!22;UBERON:0001950!5.85e-16!20;UBERON:0000025!7.56e-11!194;UBERON:0003076!8.85e-10!15;UBERON:0003057!8.85e-10!15;UBERON:0004732!1.37e-08!13;UBERON:0000064!1.66e-08!219;UBERON:0000119!1.74e-08!312;UBERON:0000483!1.94e-08!309;UBERON:0004733!5.28e-08!12;UBERON:0002028!5.28e-08!12;UBERON:0007277!5.28e-08!12;UBERON:0000475!1.16e-07!365;UBERON:0002420!1.92e-07!9;UBERON:0007245!1.92e-07!9;UBERON:0010009!1.92e-07!9;UBERON:0010011!1.92e-07!9;UBERON:0000454!1.92e-07!9;UBERON:0002308!2.33e-07!9;UBERON:0000125!2.33e-07!9;UBERON:0004111!5.70e-07!241;UBERON:0001871!8.49e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.98e-29;32!UBERON:0001893;1.33e-28;34!UBERON:0002791;1.53e-28;32!UBERON:0003528;1.57e-28;34!UBERON:0002020;1.57e-28;34!UBERON:0002780;3.44e-28;41!UBERON:0001890;3.44e-28;41!UBERON:0000073;2.10e-27;53!UBERON:0002616;2.10e-27;53!UBERON:0000956;5.60e-25;25!UBERON:0000203;5.60e-25;25!UBERON:0002619;1.71e-23;22!UBERON:0001950;1.25e-21;20!UBERON:0000955;1.69e-21;68!UBERON:0001017;3.70e-21;75!UBERON:0001016;3.82e-20;83!UBERON:0004732;2.05e-11;13!UBERON:0004733;1.34e-10;12!UBERON:0002028;1.34e-10;12!UBERON:0002420;9.17e-10;9!UBERON:0007245;9.17e-10;9!UBERON:0010009;9.17e-10;9!UBERON:0010011;9.17e-10;9!UBERON:0000454;9.17e-10;9!UBERON:0000125;1.20e-09;9!UBERON:0002308;1.20e-09;9!UBERON:0011216;8.74e-09;132!UBERON:0002680;4.24e-08;9!UBERON:0001895;4.24e-08;9!UBERON:0007023;4.43e-08;114!UBERON:0000922;4.84e-08;49!UBERON:0009663;6.54e-08;7!UBERON:0001871;7.45e-08;6!UBERON:0000200;1.45e-07;6!UBERON:0001894;2.49e-07;7!UBERON:0002298;9.11e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.94e-61,89;UBERON:0001017,1.95e-59,81;UBERON:0001049,1.73e-51,56;UBERON:0005068,1.73e-51,56;UBERON:0006241,1.73e-51,56;UBERON:0007135,1.73e-51,56;UBERON:0000073,8.54e-49,53;UBERON:0002616,8.54e-49,53;UBERON:0000955,2.33e-48,68;UBERON:0006238,2.33e-48,68;UBERON:0002346,2.13e-41,86;UBERON:0002780,3.10e-39,41;UBERON:0001890,3.10e-39,41;UBERON:0003080,3.10e-39,41;UBERON:0006240,3.10e-39,41;UBERON:0003075,3.59e-39,82;UBERON:0007284,3.59e-39,82;UBERON:0001893,3.11e-33,34;UBERON:0003528,3.24e-33,34;UBERON:0002020,3.24e-33,34;UBERON:0004121,1.01e-31,171;UBERON:0000924,1.01e-31,171;UBERON:0006601,1.01e-31,171;UBERON:0001869,1.30e-31,32;UBERON:0002791,2.06e-31,32;UBERON:0003056,3.44e-30,61;UBERON:0010371,7.21e-29,104;UBERON:0011216,3.34e-25,223;UBERON:0007023,3.51e-25,114;UBERON:0000956,6.05e-25,25;UBERON:0000203,6.05e-25,25;UBERON:0010314,1.60e-23,132;UBERON:0002619,1.78e-23,22;UBERON:0001950,1.29e-21,20;UBERON:0000025,3.96e-14,192;UBERON:0003076,5.27e-13,15;UBERON:0003057,5.27e-13,15;UBERON:0004732,2.37e-11,13;UBERON:0004733,1.55e-10,12;UBERON:0002028,1.55e-10,12;UBERON:0007277,1.55e-10,12;UBERON:0002420,9.32e-10,9;UBERON:0007245,9.32e-10,9;UBERON:0010009,9.32e-10,9;UBERON:0010011,9.32e-10,9;UBERON:0000454,9.32e-10,9;UBERON:0000125,1.22e-09,9;UBERON:0002308,1.22e-09,9;UBERON:0004111,3.26e-08,240;UBERON:0002680,4.86e-08,9;UBERON:0001895,4.86e-08,9;UBERON:0010092,4.86e-08,9;UBERON:0009663,6.63e-08,7;UBERON:0001871,7.47e-08,6;UBERON:0000200,1.46e-07,6;UBERON:0001894,2.49e-07,7;UBERON:0006222,2.49e-07,7;UBERON:0002298,9.21e-07,6 | |||
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| |||
|short_description=p1@KIF5A | |||
}} |
Revision as of 14:12, 11 January 2014
Short description: | p1@KIF5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIF5A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000286452, NM_004984, uc001sor.1, uc010srr.1_5end |
EntrezGene: | KIF5A |
HGNC: | 6323 |
UniProt: | Q12840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.99e-11 | 25 |
neurectodermal cell | 7.70e-09 | 59 |
neuronal stem cell | 1.88e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.35e-09 | 22 |
germ cell cancer | 3.35e-09 | 22 |
neuroectodermal tumor | 1.92e-07 | 10 |