FFCP PHASE1:Hg19::chr19:55686414..55686473,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:55686414..55686473,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_at_chr19:55686414..55686473,- | |description=CAGE_peak_at_chr19:55686414..55686473,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.21e-08;5!CL:0000148;4.79e-07;10 | |ontology_enrichment_celltype_v019=CL:0002322;2.21e-08;5!CL:0000148;4.79e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.05e-08,5;CL:0000148,4.88e-07,10;CL:0000541,4.88e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.33e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;5.33e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.54e-26!57;UBERON:0005068!9.54e-26!57;UBERON:0006241!9.54e-26!57;UBERON:0007135!9.54e-26!57;UBERON:0002780!9.23e-24!41;UBERON:0001890!9.23e-24!41;UBERON:0006240!9.23e-24!41;UBERON:0003080!7.45e-23!42;UBERON:0001893!3.06e-22!34;UBERON:0003075!3.52e-22!86;UBERON:0007284!3.52e-22!86;UBERON:0002020!8.01e-22!34;UBERON:0003528!8.01e-22!34;UBERON:0002791!2.76e-21!33;UBERON:0001869!4.92e-21!32;UBERON:0007023!5.01e-21!115;UBERON:0002346!5.24e-21!90;UBERON:0002616!1.35e-20!59;UBERON:0001017!8.60e-20!82;UBERON:0005743!1.19e-19!86;UBERON:0003056!2.37e-18!61;UBERON:0000955!3.30e-17!69;UBERON:0006238!3.30e-17!69;UBERON:0000073!7.82e-17!94;UBERON:0001016!7.82e-17!94;UBERON:0002619!1.18e-16!22;UBERON:0001950!6.59e-15!20;UBERON:0000956!8.15e-15!25;UBERON:0000203!8.15e-15!25;UBERON:0000033!2.37e-10!123;UBERON:0004121!3.50e-10!169;UBERON:0000153!6.04e-10!129;UBERON:0007811!6.04e-10!129;UBERON:0000924!7.56e-10!173;UBERON:0006601!7.56e-10!173;UBERON:0002420!1.72e-09!9;UBERON:0007245!1.72e-09!9;UBERON:0010009!1.72e-09!9;UBERON:0010011!1.72e-09!9;UBERON:0000454!1.72e-09!9;UBERON:0000025!1.04e-08!194;UBERON:0002308!1.15e-08!9;UBERON:0000125!1.15e-08!9;UBERON:0000200!1.10e-07!6;UBERON:0009663!1.23e-07!7;UBERON:0000119!2.05e-07!312;UBERON:0000483!3.57e-07!309;UBERON:0000064!6.13e-07!219 | |ontology_enrichment_uberon=UBERON:0001049!9.54e-26!57;UBERON:0005068!9.54e-26!57;UBERON:0006241!9.54e-26!57;UBERON:0007135!9.54e-26!57;UBERON:0002780!9.23e-24!41;UBERON:0001890!9.23e-24!41;UBERON:0006240!9.23e-24!41;UBERON:0003080!7.45e-23!42;UBERON:0001893!3.06e-22!34;UBERON:0003075!3.52e-22!86;UBERON:0007284!3.52e-22!86;UBERON:0002020!8.01e-22!34;UBERON:0003528!8.01e-22!34;UBERON:0002791!2.76e-21!33;UBERON:0001869!4.92e-21!32;UBERON:0007023!5.01e-21!115;UBERON:0002346!5.24e-21!90;UBERON:0002616!1.35e-20!59;UBERON:0001017!8.60e-20!82;UBERON:0005743!1.19e-19!86;UBERON:0003056!2.37e-18!61;UBERON:0000955!3.30e-17!69;UBERON:0006238!3.30e-17!69;UBERON:0000073!7.82e-17!94;UBERON:0001016!7.82e-17!94;UBERON:0002619!1.18e-16!22;UBERON:0001950!6.59e-15!20;UBERON:0000956!8.15e-15!25;UBERON:0000203!8.15e-15!25;UBERON:0000033!2.37e-10!123;UBERON:0004121!3.50e-10!169;UBERON:0000153!6.04e-10!129;UBERON:0007811!6.04e-10!129;UBERON:0000924!7.56e-10!173;UBERON:0006601!7.56e-10!173;UBERON:0002420!1.72e-09!9;UBERON:0007245!1.72e-09!9;UBERON:0010009!1.72e-09!9;UBERON:0010011!1.72e-09!9;UBERON:0000454!1.72e-09!9;UBERON:0000025!1.04e-08!194;UBERON:0002308!1.15e-08!9;UBERON:0000125!1.15e-08!9;UBERON:0000200!1.10e-07!6;UBERON:0009663!1.23e-07!7;UBERON:0000119!2.05e-07!312;UBERON:0000483!3.57e-07!309;UBERON:0000064!6.13e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.88e-32;34!UBERON:0001869;5.41e-31;32!UBERON:0002791;1.67e-30;32!UBERON:0003528;1.94e-29;34!UBERON:0002020;1.94e-29;34!UBERON:0002619;1.81e-28;22!UBERON:0002780;4.17e-27;41!UBERON:0001890;4.17e-27;41!UBERON:0001950;1.76e-25;20!UBERON:0000956;2.19e-24;25!UBERON:0000203;2.19e-24;25!UBERON:0000073;5.21e-21;53!UBERON:0002616;5.21e-21;53!UBERON:0002420;5.14e-15;9!UBERON:0007245;5.14e-15;9!UBERON:0010009;5.14e-15;9!UBERON:0010011;5.14e-15;9!UBERON:0000454;5.14e-15;9!UBERON:0000955;8.56e-14;68!UBERON:0001017;1.44e-12;75!UBERON:0000200;6.23e-12;6!UBERON:0009663;6.99e-12;7!UBERON:0000125;3.07e-11;9!UBERON:0002308;3.07e-11;9!UBERON:0001016;8.35e-11;83!UBERON:0000349;1.69e-09;5!UBERON:0001872;2.38e-09;5!UBERON:0000369;4.24e-08;4!UBERON:0002435;4.24e-08;4!UBERON:0000204;4.24e-08;4!UBERON:0007023;1.57e-07;114!UBERON:0001871;6.30e-07;6!UBERON:0001870;7.65e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001893;2.88e-32;34!UBERON:0001869;5.41e-31;32!UBERON:0002791;1.67e-30;32!UBERON:0003528;1.94e-29;34!UBERON:0002020;1.94e-29;34!UBERON:0002619;1.81e-28;22!UBERON:0002780;4.17e-27;41!UBERON:0001890;4.17e-27;41!UBERON:0001950;1.76e-25;20!UBERON:0000956;2.19e-24;25!UBERON:0000203;2.19e-24;25!UBERON:0000073;5.21e-21;53!UBERON:0002616;5.21e-21;53!UBERON:0002420;5.14e-15;9!UBERON:0007245;5.14e-15;9!UBERON:0010009;5.14e-15;9!UBERON:0010011;5.14e-15;9!UBERON:0000454;5.14e-15;9!UBERON:0000955;8.56e-14;68!UBERON:0001017;1.44e-12;75!UBERON:0000200;6.23e-12;6!UBERON:0009663;6.99e-12;7!UBERON:0000125;3.07e-11;9!UBERON:0002308;3.07e-11;9!UBERON:0001016;8.35e-11;83!UBERON:0000349;1.69e-09;5!UBERON:0001872;2.38e-09;5!UBERON:0000369;4.24e-08;4!UBERON:0002435;4.24e-08;4!UBERON:0000204;4.24e-08;4!UBERON:0007023;1.57e-07;114!UBERON:0001871;6.30e-07;6!UBERON:0001870;7.65e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.52e-38,41;UBERON:0001890,2.52e-38,41;UBERON:0003080,2.52e-38,41;UBERON:0006240,2.52e-38,41;UBERON:0001049,6.49e-38,56;UBERON:0005068,6.49e-38,56;UBERON:0006241,6.49e-38,56;UBERON:0007135,6.49e-38,56;UBERON:0001893,5.78e-37,34;UBERON:0000073,1.17e-36,53;UBERON:0002616,1.17e-36,53;UBERON:0001869,6.55e-35,32;UBERON:0002791,2.47e-34,32;UBERON:0003528,4.27e-34,34;UBERON:0002020,4.27e-34,34;UBERON:0001017,5.55e-31,81;UBERON:0000955,4.71e-29,68;UBERON:0006238,4.71e-29,68;UBERON:0002619,2.21e-28,22;UBERON:0001016,7.63e-28,89;UBERON:0003075,8.70e-26,82;UBERON:0007284,8.70e-26,82;UBERON:0001950,2.16e-25,20;UBERON:0003056,2.89e-25,61;UBERON:0000956,2.61e-24,25;UBERON:0000203,2.61e-24,25;UBERON:0002346,5.60e-24,86;UBERON:0007023,2.67e-22,114;UBERON:0010371,9.66e-21,104;UBERON:0010314,1.26e-15,132;UBERON:0002420,5.50e-15,9;UBERON:0007245,5.50e-15,9;UBERON:0010009,5.50e-15,9;UBERON:0010011,5.50e-15,9;UBERON:0000454,5.50e-15,9;UBERON:0004121,1.33e-12,171;UBERON:0000924,1.33e-12,171;UBERON:0006601,1.33e-12,171;UBERON:0000200,6.16e-12,6;UBERON:0009663,7.46e-12,7;UBERON:0000125,3.30e-11,9;UBERON:0002308,3.30e-11,9;UBERON:0000349,1.71e-09,5;UBERON:0001872,3.06e-09,5;UBERON:0000025,5.32e-09,192;UBERON:0011216,5.48e-09,223;UBERON:0000369,4.33e-08,4;UBERON:0002435,4.33e-08,4;UBERON:0000204,4.33e-08,4;UBERON:0010082,4.33e-08,4;UBERON:0001871,6.20e-07,6;UBERON:0001870,7.68e-07,3 | |||
|phase1_expression=0,0,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25381888591235,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,2.00535164254356,0,2.3858578411533,0,0.0945348171640679,0,0,3.47094550068939,0,0,0,0,0,0,0,1.11437250398869,2.18638648103376,3.4409383804245,0,0,0.838998872419812,0,0,0,0,0,2.01414658554573,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0.898117490504679,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.468642863667593,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,1.82032272387605,2.87447256726495,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,9.02605425359006,3.97589304964456,5.22872742912833,4.04278114559945,4.79409616663694,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.502644862058154,0.370353780634118,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,1.15014803749563,0,0,0,0,0,1.65094525159639,27.503166640196,1.17217447210047,0,0.205654985406647,0,3.14409075893636,0.672786506072164,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.857867961948885,0,0.823240336780769,0,1.42156779497018,0,1.80863626235752,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.640695746278505,1.02341449813341,0,1.48418066444991,0,1.24293207719189,0.246381468041427,0,0,0,0,0.0920809889358963,0,0,0,0,0.385076685522074,0,0,0,0,3.74206151608334,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0.261435451024901,0,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0.773365746336976,0.770243085573222,0.460511024178389,0,0,0.435050081742686,0.170453254832202,0.267096106940212,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,1.41904425628239,0,0,0,1.74967360122491,0,0,0,0,0,0,0,0,0,2.29391162142713,0,0,0,1.94541993357815,1.62009431171434,3.17250070517708,0.106824071127473,0,26.2193031099704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.614321404198464,30.8185770807552,11.253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3866549219044,37.8493840500353,0,0,0,0,0,0,10.8738333613251,32.0611337114562,0,0,37.2011382041812,13.1450118101695,0,0.110579259931225,1.47773809476774,26.9844038499386,0,0,0.230850775511391,0,0.69169171316418,3.05175990993225,0.54323685961004,0,1.55715908783166,0.533034776018635,0,0,6.81467895790641,16.9196745462886,16.2731903483724,15.4395860017775,7.77990304169159,0.158936578980379,3.16497096792041,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,1.14581926067151,0,14.2901311892457,0,16.8271572281597,0,0,0,0,1.70603764996917,0,0,0,1.65495977937749,0,0,24.4764209585622,18.7210808567737,1.04135843001079,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0.596143835108969,35.9605321029391,0.195551382734803,0,0.426905989478705,10.789718917435,0,9.506537481771,11.3252698588897,0,0,0,0,0,0,0,12.0084057741958,4.10716136675979,0,0,0,0.837847203816763,0,0,5.19165401297377,0,0,0.134366944973453,0.360299883542404,0,0,0,0.0674035438541849,0,0,12.7236750369489,13.484137205046,0.321506296930038,1.2378549293751,1.24632101408756,0,0,26.9728031561629,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,8.39086174260675,0,0,0,0,0.574647645245373,0,20.8494248397031,0.146552233678082,0,0.775697738169303,1.3223260174269,2.22412889249628,0,0.427149650270779,0,0,0,0.395223263795889,0,0,0,0,0,0,0.942324577501406,45.1894771783163,59.7928698019619,31.9236873301575,0,0.554645257684261,1.73869928235874,0,0,0,1.14186133417987,0.705797459094515,0,3.18826262943815,0.74627401443437,0.701139929541673,0,0,0.251567901752575,0,0,0.907385542579434,0,0,0,1.34940933649081,0.310525913752519,0,0,0.521745061811734,0.901545653983311,0.761610424337591,0,0.909243296012797,0.644463342254931,0,2.78667122089031,0,0,0,0,33.9010901516854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5134287941944,9.54815513313003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,1.41070377476274,0,33.0780509246767,18.420554922326,9.73766540248623,23.1781491592053,0,27.2479574709018,36.4934959127983,0,0,0,0,0,0,0,0,2.632361492224,0.20170506870352,0,0,4.09429793775242,0,29.2437741397649,42.1782173251478,20.255306057116,30.1859256522996,1.09394961803644,0,0,0.175871244359621,0,0.535701835878287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| ||
|short_description=p@chr19:55686414..55686473,- | |short_description=p@chr19:55686414..55686473,- | ||
}} | }} |
Latest revision as of 17:24, 27 July 2015
Short description: | p@chr19:55686414..55686473, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55686414..55686473, - |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.05e-08 | 5 |
melanocyte | 4.88e-07 | 10 |
melanoblast | 4.88e-07 | 10 |