FFCP PHASE1:Hg19::chr1:216680229..216680242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:216680229..216680242,- | |||
|coexpression_cluster_id=C1850 | |||
|description=CAGE_peak_at_chr1:216680229..216680242,- | |description=CAGE_peak_at_chr1:216680229..216680242,- | ||
|id=chr1:216680229..216680242,- | |id=chr1:216680229..216680242,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.64e-33;2!CL:0000242;1.64e-33;2!CL:0000312;4.69e-14;5!CL:0000240;7.08e-12;6!CL:0000311;7.08e-12;6!CL:0000079;7.08e-12;6!CL:0000237;7.08e-12;6!CL:0000095;2.28e-08;17!CL:0000362;3.18e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.70e-33,2;CL:0000312,5.72e-14,5;CL:0000240,8.35e-12,6;CL:0000311,8.35e-12,6;CL:0000079,8.35e-12,6;CL:0000237,8.35e-12,6;CL:0000036,8.35e-12,6;CL:0000357,8.35e-12,6;CL:0000114,8.35e-12,6;CL:0000095,2.56e-08,17;CL:0000123,2.56e-08,17;CL:0000362,3.55e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;7.08e-12;6!CL:0000114;7.08e-12;6!UBERON:0006215;6.32e-07;3!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.86e-37!115;UBERON:0001049!9.69e-36!57;UBERON:0005068!9.69e-36!57;UBERON:0006241!9.69e-36!57;UBERON:0007135!9.69e-36!57;UBERON:0002346!1.52e-32!90;UBERON:0002616!6.15e-32!59;UBERON:0003075!2.35e-31!86;UBERON:0007284!2.35e-31!86;UBERON:0000955!8.69e-29!69;UBERON:0006238!8.69e-29!69;UBERON:0000073!3.23e-28!94;UBERON:0001016!3.23e-28!94;UBERON:0001017!8.51e-27!82;UBERON:0002780!1.68e-26!41;UBERON:0001890!1.68e-26!41;UBERON:0006240!1.68e-26!41;UBERON:0005743!2.40e-26!86;UBERON:0003080!1.14e-25!42;UBERON:0000924!3.93e-22!173;UBERON:0006601!3.93e-22!173;UBERON:0000153!3.79e-21!129;UBERON:0007811!3.79e-21!129;UBERON:0004121!5.22e-21!169;UBERON:0003056!1.18e-20!61;UBERON:0002020!6.69e-20!34;UBERON:0003528!6.69e-20!34;UBERON:0001869!7.60e-19!32;UBERON:0000033!1.32e-18!123;UBERON:0001893!2.15e-17!34;UBERON:0002791!1.69e-16!33;UBERON:0002619!2.44e-15!22;UBERON:0001950!4.84e-15!20;UBERON:0000956!9.61e-15!25;UBERON:0000203!9.61e-15!25;UBERON:0000064!1.97e-12!219;UBERON:0001894!2.21e-12!7;UBERON:0006222!2.21e-12!7;UBERON:0004733!1.22e-11!12;UBERON:0002028!1.22e-11!12;UBERON:0007277!1.22e-11!12;UBERON:0003076!4.48e-11!15;UBERON:0003057!4.48e-11!15;UBERON:0004732!1.43e-10!13;UBERON:0000481!1.64e-10!347;UBERON:0000477!3.83e-10!286;UBERON:0000200!1.36e-09!6;UBERON:0000025!5.53e-09!194;UBERON:0000063!2.63e-08!97;UBERON:0002298!3.21e-08!8;UBERON:0004111!3.43e-08!241;UBERON:0003296!5.01e-08!4;UBERON:0010133!5.01e-08!4;UBERON:0000483!6.86e-08!309;UBERON:0000119!1.16e-07!312;UBERON:0002680!1.65e-07!9;UBERON:0001895!1.65e-07!9;UBERON:0010092!1.65e-07!9;UBERON:0000062!5.57e-07!511;UBERON:0000988!8.02e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;7.62e-38;4!UBERON:0001905;2.38e-34;2!UBERON:0002757;2.38e-34;2!UBERON:0010134;2.38e-34;2!UBERON:0005408;2.38e-34;2!UBERON:0001899;2.38e-34;2!UBERON:0000988;6.09e-23;3!UBERON:0001894;5.69e-22;7!UBERON:0003296;9.92e-18;4!UBERON:0010133;9.92e-18;4!UBERON:0002426;1.12e-17;1!UBERON:0003831;1.12e-17;1!UBERON:0003898;1.12e-17;1!UBERON:0004830;1.12e-17;1!UBERON:0003830;1.12e-17;1!UBERON:0005175;1.12e-17;1!UBERON:0001774;1.12e-17;1!UBERON:0001103;1.12e-17;1!UBERON:0002680;2.99e-17;9!UBERON:0001895;2.99e-17;9!UBERON:0004733;4.18e-13;12!UBERON:0002028;4.18e-13;12!UBERON:0004732;3.80e-12;13!UBERON:0002298;5.52e-12;6!UBERON:0001897;1.64e-09;2!UBERON:0002148;1.64e-09;2!UBERON:0005090;1.64e-09;2!UBERON:0001630;1.64e-09;2!UBERON:0006331;1.64e-09;2!UBERON:0009662;1.64e-09;2!UBERON:0010225;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,5.93e-38,4;UBERON:0001905,2.18e-34,2;UBERON:0002757,2.18e-34,2;UBERON:0010134,2.18e-34,2;UBERON:0005408,2.18e-34,2;UBERON:0001899,2.18e-34,2;UBERON:0000988,4.12e-23,3;UBERON:0001894,4.93e-22,7;UBERON:0006222,4.93e-22,7;UBERON:0003296,9.51e-18,4;UBERON:0010133,9.51e-18,4;UBERON:0002426,1.03e-17,1;UBERON:0003831,1.03e-17,1;UBERON:0003898,1.03e-17,1;UBERON:0004830,1.03e-17,1;UBERON:0003830,1.03e-17,1;UBERON:0005175,1.03e-17,1;UBERON:0001774,1.03e-17,1;UBERON:0001103,1.03e-17,1;UBERON:0010084,1.03e-17,1;UBERON:0002680,2.54e-17,9;UBERON:0001895,2.54e-17,9;UBERON:0010092,2.54e-17,9;UBERON:0004733,3.69e-13,12;UBERON:0002028,3.69e-13,12;UBERON:0007277,3.69e-13,12;UBERON:0004732,3.39e-12,13;UBERON:0002298,4.55e-12,6;UBERON:0010371,4.67e-12,104;UBERON:0000955,3.03e-11,68;UBERON:0006238,3.03e-11,68;UBERON:0000073,6.13e-11,53;UBERON:0002616,6.13e-11,53;UBERON:0003076,1.19e-10,15;UBERON:0003057,1.19e-10,15;UBERON:0001049,2.37e-10,56;UBERON:0005068,2.37e-10,56;UBERON:0006241,2.37e-10,56;UBERON:0007135,2.37e-10,56;UBERON:0002148,1.33e-09,2;UBERON:0006331,1.33e-09,2;UBERON:0009662,1.33e-09,2;UBERON:0001897,1.44e-09,2;UBERON:0010225,1.44e-09,2;UBERON:0005090,1.57e-09,2;UBERON:0001630,1.57e-09,2;UBERON:0001017,2.03e-09,81;UBERON:0003075,2.03e-09,82;UBERON:0007284,2.03e-09,82;UBERON:0002346,5.78e-09,86;UBERON:0001016,1.88e-08,89;UBERON:0004121,5.78e-07,171;UBERON:0000924,5.78e-07,171;UBERON:0006601,5.78e-07,171 | |||
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|short_description=p@chr1:216680229..216680242,- | |short_description=p@chr1:216680229..216680242,- | ||
}} | }} |
Latest revision as of 03:53, 28 July 2015
Short description: | p@chr1:216680229..216680242, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:216680229..216680242, - |
Coexpression cluster: | C1850_small_pineal_pons_placenta_eye_heart_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.70e-33 | 2 |
keratinocyte | 5.72e-14 | 5 |
stratified squamous epithelial cell | 8.35e-12 | 6 |
keratin accumulating cell | 8.35e-12 | 6 |
stratified epithelial cell | 8.35e-12 | 6 |
keratinizing barrier epithelial cell | 8.35e-12 | 6 |
epithelial fate stem cell | 8.35e-12 | 6 |
stratified epithelial stem cell | 8.35e-12 | 6 |
surface ectodermal cell | 8.35e-12 | 6 |
neuron associated cell | 2.56e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 2.56e-08 | 17 |
epidermal cell | 3.55e-08 | 9 |