FFCP PHASE1:Hg19::chr9:116716048..116716100,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:116716048..116716100,+ to FFCP PHASE1:Hg19::chr9:116716048..116716100,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:116716048..116716100,+ | |||
|coexpression_cluster_id=C1203 | |||
|description=CAGE_peak_at_chr9:116716048..116716100,+ | |||
|id=chr9:116716048..116716100,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.64e-33!24;CL:0000115!1.53e-29!35;CL:0000222!7.53e-29!119;CL:0000071!4.85e-28!18;CL:0002546!4.85e-28!18;CL:0002078!1.75e-21!44;CL:0000359!8.43e-19!32;CL:0000055!2.02e-16!180;CL:0000213!7.57e-16!57;CL:0000215!7.57e-16!57;CL:0000183!1.46e-15!59;CL:1000413!1.74e-15!9;CL:0000187!3.50e-15!54;CL:0000192!4.25e-15!42;CL:0000514!4.25e-15!42;CL:0000680!5.20e-15!57;CL:0000056!5.20e-15!57;CL:0000355!5.20e-15!57;CL:0002371!4.23e-14!591;CL:0000393!8.61e-13!60;CL:0000211!8.61e-13!60;CL:0000144!4.54e-12!625;CL:0002539!3.47e-11!10;CL:0002544!5.74e-11!6;CL:0002543!1.37e-10!6;CL:0000220!9.32e-10!246;CL:0002321!1.53e-09!248;CL:0000048!2.53e-09!430;CL:0000723!7.36e-09!436;CL:0000548!8.66e-09!679;CL:0000004!8.66e-09!679;CL:0000255!8.66e-09!679;CL:0000012!1.35e-08!682;CL:0000034!2.89e-08!444;CL:0005020!3.05e-07!6;CL:0002138!3.05e-07!6;CL:0005022!3.05e-07!6;CL:0000003!5.10e-07!722;CL:0002594!7.95e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.49e-62;24!CL:0000115;4.28e-56;36!CL:0000071;2.01e-53;18!CL:1000413;3.12e-35;9!CL:0002078;3.06e-29;45!CL:0002544;3.10e-24;6!CL:0002543;3.57e-23;6!CL:0000213;4.24e-23;58!CL:0000215;4.24e-23;58!CL:0002188;1.32e-12;5!CL:0002618;9.14e-12;3!CL:0000359;5.28e-11;32!CL:0002138;7.16e-11;6!CL:0000076;8.80e-10;63!CL:0002545;3.44e-09;2!CL:1000746;5.14e-09;7!CL:1000612;5.14e-09;7!CL:0002594;8.13e-09;4!CL:0002494;9.53e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.43e-63,36;CL:0002139,3.57e-62,24;CL:0000071,1.25e-53,18;CL:0002546,1.25e-53,18;CL:0002078,4.55e-49,45;CL:0000213,9.13e-40,58;CL:0000215,9.13e-40,58;CL:1000413,2.85e-35,9;CL:0000222,5.98e-35,121;CL:0002544,2.71e-24,6;CL:0002543,2.21e-23,6;CL:0000076,3.51e-14,63;CL:0002321,3.92e-14,250;CL:0002188,1.31e-12,5;CL:0002618,5.73e-12,3;CL:0000359,2.18e-11,32;CL:0005020,7.26e-11,6;CL:0002138,7.26e-11,6;CL:0005022,7.26e-11,6;CL:0002545,3.38e-09,2;CL:1000746,5.09e-09,7;CL:1000612,5.09e-09,7;CL:0002594,9.45e-09,4;CL:0000192,6.25e-08,43;CL:0000514,6.25e-08,43;CL:0002494,1.04e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;2.01e-53;18!CL:0005022;7.16e-11;6!CL:0000222;4.60e-09;121 | |||
|ontology_enrichment_disease=DOID:2394!1.25e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.84e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.62e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.84e-43!69;UBERON:0002049!1.08e-41!79;UBERON:0007798!1.08e-41!79;UBERON:0001981!1.14e-39!60;UBERON:0007500!1.14e-39!60;UBERON:0004537!1.14e-39!60;UBERON:0006965!1.14e-39!60;UBERON:0004872!2.12e-33!84;UBERON:0004535!2.44e-33!110;UBERON:0001009!6.20e-32!113;UBERON:0001637!2.09e-30!42;UBERON:0003509!2.09e-30!42;UBERON:0004572!2.09e-30!42;UBERON:0001986!4.85e-28!18;UBERON:0004638!4.85e-28!18;UBERON:0004852!4.85e-28!18;UBERON:0003914!2.59e-27!118;UBERON:0004573!2.69e-23!33;UBERON:0004571!2.69e-23!33;UBERON:0000487!9.28e-22!22;UBERON:0006914!2.18e-18!25;UBERON:0000947!3.12e-18!21;UBERON:0010191!3.12e-18!21;UBERON:0003081!7.33e-16!216;UBERON:0003915!1.74e-15!9;UBERON:0004700!1.74e-15!9;UBERON:0001917!1.74e-15!9;UBERON:0000490!1.77e-15!138;UBERON:0004290!1.72e-13!70;UBERON:0001134!1.95e-13!61;UBERON:0002036!1.95e-13!61;UBERON:0003082!1.95e-13!61;UBERON:0002385!9.96e-13!63;UBERON:0001015!9.96e-13!63;UBERON:0000383!9.96e-13!63;UBERON:0000025!1.93e-11!194;UBERON:0004237!3.47e-11!10;UBERON:0004695!3.47e-11!10;UBERON:0002111!3.47e-11!10;UBERON:0004178!3.47e-11!10;UBERON:0000486!3.77e-10!82;UBERON:0000914!6.41e-10!83;UBERON:0002329!6.41e-10!83;UBERON:0003077!6.41e-10!83;UBERON:0003059!6.41e-10!83;UBERON:0007282!6.41e-10!83;UBERON:0009618!6.41e-10!83;UBERON:0007285!6.41e-10!83;UBERON:0001135!9.39e-10!15;UBERON:0004111!6.35e-09!241;UBERON:0001638!1.78e-08!9;UBERON:0003920!1.78e-08!9;UBERON:0004582!1.78e-08!9;UBERON:0000119!5.70e-08!312;UBERON:0000483!5.16e-07!309;UBERON:0000477!6.06e-07!286;UBERON:0001310!7.95e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.01e-53;18!UBERON:0001986;2.01e-53;18!UBERON:0004852;2.01e-53;18!UBERON:0000487;5.84e-43;22!UBERON:0006914;2.61e-37;25!UBERON:0003915;3.12e-35;9!UBERON:0004700;3.12e-35;9!UBERON:0001917;3.12e-35;9!UBERON:0000490;2.58e-28;33!UBERON:0000055;3.89e-27;65!UBERON:0007500;2.24e-25;56!UBERON:0001981;2.24e-25;56!UBERON:0004537;2.24e-25;56!UBERON:0001637;6.60e-25;42!UBERON:0003509;6.60e-25;42!UBERON:0004572;6.60e-25;42!UBERON:0003914;1.38e-19;74!UBERON:0004573;1.67e-19;33!UBERON:0004571;1.67e-19;33!UBERON:0002049;3.74e-17;75!UBERON:0007798;3.74e-17;75!UBERON:0000947;1.61e-16;21!UBERON:0010191;1.61e-16;21!UBERON:0001638;3.15e-15;9!UBERON:0003920;3.15e-15;9!UBERON:0004582;3.15e-15;9!UBERON:0010260;3.20e-14;9!UBERON:0000025;4.00e-11;93!UBERON:0001009;1.26e-10;112!UBERON:0004535;1.28e-09;109!UBERON:0005800;3.44e-09;2!UBERON:0001515;3.44e-09;2!UBERON:0000074;5.14e-09;7!UBERON:0001229;5.14e-09;7!UBERON:0002119;5.45e-09;4!UBERON:0001310;8.13e-09;4!UBERON:0001473;3.74e-08;8!UBERON:0004536;3.74e-08;8!UBERON:0006558;3.74e-08;8!UBERON:0000119;5.76e-08;139!UBERON:0000483;2.09e-07;136!UBERON:0004111;2.14e-07;130!UBERON:0002066;3.14e-07;5!UBERON:0000992;4.74e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.25e-53,18;UBERON:0001986,1.25e-53,18;UBERON:0004852,1.25e-53,18;UBERON:0000055,2.08e-50,68;UBERON:0007500,3.85e-44,59;UBERON:0001981,3.85e-44,59;UBERON:0004537,3.85e-44,59;UBERON:0006965,3.85e-44,59;UBERON:0000487,3.97e-43,22;UBERON:0002049,6.51e-43,78;UBERON:0007798,6.51e-43,78;UBERON:0004872,2.14e-39,83;UBERON:0006914,1.86e-37,25;UBERON:0004535,3.64e-37,109;UBERON:0001009,6.18e-36,112;UBERON:0003915,2.85e-35,9;UBERON:0004700,2.85e-35,9;UBERON:0001917,2.85e-35,9;UBERON:0003914,7.22e-34,117;UBERON:0001637,2.96e-31,42;UBERON:0003509,2.96e-31,42;UBERON:0004572,2.96e-31,42;UBERON:0003081,1.33e-20,203;UBERON:0004573,2.24e-19,33;UBERON:0004571,2.24e-19,33;UBERON:0000025,4.02e-17,192;UBERON:0000947,1.39e-16,21;UBERON:0010191,1.39e-16,21;UBERON:0004111,2.70e-16,240;UBERON:0000490,8.07e-16,148;UBERON:0000926,2.02e-15,315;UBERON:0004120,2.02e-15,315;UBERON:0006603,2.02e-15,315;UBERON:0001638,2.31e-15,9;UBERON:0003920,2.31e-15,9;UBERON:0004582,2.31e-15,9;UBERON:0010260,2.71e-14,9;UBERON:0005800,3.38e-09,2;UBERON:0001515,3.38e-09,2;UBERON:0000483,4.51e-09,306;UBERON:0010532,5.09e-09,7;UBERON:0000074,5.09e-09,7;UBERON:0001229,5.09e-09,7;UBERON:0001230,5.09e-09,7;UBERON:0003220,5.09e-09,7;UBERON:0005749,5.09e-09,7;UBERON:0004199,5.09e-09,7;UBERON:0004209,5.09e-09,7;UBERON:0004198,5.09e-09,7;UBERON:0002119,6.62e-09,4;UBERON:0000119,6.68e-09,309;UBERON:0001310,9.45e-09,4;UBERON:0007503,2.72e-08,78;UBERON:0001473,3.78e-08,8;UBERON:0004536,3.78e-08,8;UBERON:0006558,3.78e-08,8;UBERON:0005103,6.80e-08,8;UBERON:0000083,6.80e-08,8;UBERON:0009201,6.80e-08,8;UBERON:0006553,6.80e-08,8;UBERON:0003074,6.80e-08,8;UBERON:0003060,6.80e-08,8;UBERON:0002066,2.39e-07,5;UBERON:0000080,5.13e-07,9;UBERON:0002120,5.13e-07,9;UBERON:0004875,5.13e-07,9;UBERON:0005721,5.13e-07,9;UBERON:0005754,5.13e-07,9;UBERON:0007297,5.13e-07,9;UBERON:0000992,5.61e-07,13 | |||
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|short_description=p@chr9:116716048..116716100,+ | |||
}} | }} |
Latest revision as of 22:00, 31 July 2015
Short description: | p@chr9:116716048..116716100, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:116716048..116716100, + |
Coexpression cluster: | C1203_Endothelial_placenta_choriocarcinoma_Renal_Hair_Fibroblast_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.43e-63 | 36 |
endothelial cell of vascular tree | 3.57e-62 | 24 |
blood vessel endothelial cell | 1.25e-53 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.25e-53 | 18 |
meso-epithelial cell | 4.55e-49 | 45 |
lining cell | 9.13e-40 | 58 |
barrier cell | 9.13e-40 | 58 |
endothelial cell of artery | 2.85e-35 | 9 |
mesodermal cell | 5.98e-35 | 121 |
aortic endothelial cell | 2.71e-24 | 6 |
vein endothelial cell | 2.21e-23 | 6 |
squamous epithelial cell | 3.51e-14 | 63 |
embryonic cell | 3.92e-14 | 250 |
glomerular endothelial cell | 1.31e-12 | 5 |
endothelial cell of umbilical vein | 5.73e-12 | 3 |
vascular associated smooth muscle cell | 2.18e-11 | 32 |
lymphangioblast | 7.26e-11 | 6 |
endothelial cell of lymphatic vessel | 7.26e-11 | 6 |
vascular lymphangioblast | 7.26e-11 | 6 |
thoracic aorta endothelial cell | 3.38e-09 | 2 |
glomerular cell | 5.09e-09 | 7 |
kidney corpuscule cell | 5.09e-09 | 7 |
smooth muscle cell of the umbilical artery | 9.45e-09 | 4 |
smooth muscle cell | 6.25e-08 | 43 |
smooth muscle myoblast | 6.25e-08 | 43 |
cardiocyte | 1.04e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.62e-09 | 14 |