FFCP PHASE1:Hg19::chr9:3526461..3526499,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-223bp_to_ENST00000423112_5end | |association_with_transcript=-223bp_to_ENST00000423112_5end | ||
|cluster_id=chr9:3526461..3526499,+ | |||
|coexpression_cluster_id=C1306 | |coexpression_cluster_id=C1306 | ||
|description=CAGE_peak_1_at_ENST00000423112_5end | |description=CAGE_peak_1_at_ENST00000423112_5end | ||
|id=chr9:3526461..3526499,+ | |id=chr9:3526461..3526499,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.80e-31!140;CL:0002031!3.11e-27!124;CL:0000037!3.50e-27!172;CL:0000566!3.50e-27!172;CL:0002087!2.86e-25!119;CL:0000988!1.93e-24!182;CL:0002032!2.91e-24!165;CL:0000837!2.91e-24!165;CL:0002057!8.53e-20!42;CL:0000860!9.45e-18!45;CL:0000838!6.23e-15!52;CL:0000542!1.35e-14!53;CL:0000051!1.35e-14!53;CL:0000766!1.18e-12!76;CL:0000557!1.19e-12!71;CL:0000839!6.77e-12!70;CL:0002009!6.69e-11!65;CL:0000763!7.84e-11!112;CL:0000049!7.84e-11!112;CL:0000791!2.05e-10!18;CL:0000789!2.05e-10!18;CL:0002420!2.05e-10!18;CL:0002419!2.05e-10!18;CL:0000790!2.05e-10!18;CL:0002194!3.70e-10!63;CL:0000576!3.70e-10!63;CL:0000040!3.70e-10!63;CL:0000559!3.70e-10!63;CL:0000084!3.35e-08!25;CL:0000827!3.35e-08!25;CL:0000625!2.63e-07!11 | |ontology_enrichment_celltype=CL:0000738!9.80e-31!140;CL:0002031!3.11e-27!124;CL:0000037!3.50e-27!172;CL:0000566!3.50e-27!172;CL:0002087!2.86e-25!119;CL:0000988!1.93e-24!182;CL:0002032!2.91e-24!165;CL:0000837!2.91e-24!165;CL:0002057!8.53e-20!42;CL:0000860!9.45e-18!45;CL:0000838!6.23e-15!52;CL:0000542!1.35e-14!53;CL:0000051!1.35e-14!53;CL:0000766!1.18e-12!76;CL:0000557!1.19e-12!71;CL:0000839!6.77e-12!70;CL:0002009!6.69e-11!65;CL:0000763!7.84e-11!112;CL:0000049!7.84e-11!112;CL:0000791!2.05e-10!18;CL:0000789!2.05e-10!18;CL:0002420!2.05e-10!18;CL:0002419!2.05e-10!18;CL:0000790!2.05e-10!18;CL:0002194!3.70e-10!63;CL:0000576!3.70e-10!63;CL:0000040!3.70e-10!63;CL:0000559!3.70e-10!63;CL:0000084!3.35e-08!25;CL:0000827!3.35e-08!25;CL:0000625!2.63e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-13;33!CL:0002057;1.02e-13;33!CL:0000576;4.59e-12;48!CL:0002087;1.25e-10;104!CL:0000791;1.56e-10;18!CL:0000789;1.56e-10;18!CL:0002419;1.56e-10;18!CL:0000542;2.46e-09;53!CL:0000084;1.73e-08;25!CL:0000766;1.85e-08;69!CL:0000473;2.45e-08;39!CL:0000234;2.45e-08;39!CL:0000625;2.17e-07;11!CL:0000738;6.38e-07;136!CL:0000236;7.76e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.89e-33,136;CL:0002031,1.60e-29,120;CL:0000037,2.29e-29,168;CL:0002087,1.68e-27,115;CL:0000988,4.21e-27,177;CL:0002032,2.44e-26,161;CL:0000837,2.44e-26,161;CL:0000860,7.41e-20,42;CL:0002057,7.41e-20,42;CL:0000473,2.09e-15,48;CL:0000234,2.09e-15,48;CL:0000838,5.62e-15,52;CL:0000542,1.22e-14,53;CL:0000051,1.22e-14,53;CL:0000766,1.39e-14,72;CL:0000557,1.39e-14,67;CL:0000839,9.28e-14,66;CL:0002009,9.69e-13,61;CL:0000763,2.32e-12,108;CL:0000049,2.32e-12,108;CL:0002194,6.10e-12,59;CL:0000576,6.10e-12,59;CL:0000040,6.10e-12,59;CL:0000559,6.10e-12,59;CL:0000791,1.92e-10,18;CL:0000789,1.92e-10,18;CL:0002420,1.92e-10,18;CL:0002419,1.92e-10,18;CL:0000790,1.92e-10,18;CL:0000084,3.18e-08,25;CL:0000827,3.18e-08,25;CL:0000625,2.52e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-14;42!CL:0000790;1.56e-10;18!CL:0000051;2.46e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-20!115;UBERON:0002390!4.35e-16!102;UBERON:0003061!4.35e-16!102;UBERON:0001049!7.63e-14!57;UBERON:0005068!7.63e-14!57;UBERON:0006241!7.63e-14!57;UBERON:0007135!7.63e-14!57;UBERON:0002193!3.71e-13!112;UBERON:0001017!1.74e-12!82;UBERON:0002371!8.14e-12!80;UBERON:0005743!3.51e-11!86;UBERON:0000073!4.74e-11!94;UBERON:0001016!4.74e-11!94;UBERON:0000955!6.64e-11!69;UBERON:0006238!6.64e-11!69;UBERON:0002616!8.28e-11!59;UBERON:0002780!1.09e-10!41;UBERON:0001890!1.09e-10!41;UBERON:0006240!1.09e-10!41;UBERON:0003080!2.46e-10!42;UBERON:0001474!1.21e-09!86;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0001893!1.40e-08!34;UBERON:0002791!1.92e-08!33;UBERON:0001869!8.33e-08!32;UBERON:0002346!1.78e-07!90;UBERON:0004765!2.65e-07!101;UBERON:0001434!2.65e-07!101;UBERON:0003075!2.72e-07!86;UBERON:0007284!2.72e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.57e-20!115;UBERON:0002390!4.35e-16!102;UBERON:0003061!4.35e-16!102;UBERON:0001049!7.63e-14!57;UBERON:0005068!7.63e-14!57;UBERON:0006241!7.63e-14!57;UBERON:0007135!7.63e-14!57;UBERON:0002193!3.71e-13!112;UBERON:0001017!1.74e-12!82;UBERON:0002371!8.14e-12!80;UBERON:0005743!3.51e-11!86;UBERON:0000073!4.74e-11!94;UBERON:0001016!4.74e-11!94;UBERON:0000955!6.64e-11!69;UBERON:0006238!6.64e-11!69;UBERON:0002616!8.28e-11!59;UBERON:0002780!1.09e-10!41;UBERON:0001890!1.09e-10!41;UBERON:0006240!1.09e-10!41;UBERON:0003080!2.46e-10!42;UBERON:0001474!1.21e-09!86;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0001893!1.40e-08!34;UBERON:0002791!1.92e-08!33;UBERON:0001869!8.33e-08!32;UBERON:0002346!1.78e-07!90;UBERON:0004765!2.65e-07!101;UBERON:0001434!2.65e-07!101;UBERON:0003075!2.72e-07!86;UBERON:0007284!2.72e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.61e-08;53!UBERON:0002616;2.61e-08;53!UBERON:0002780;5.11e-08;41!UBERON:0001890;5.11e-08;41!UBERON:0003528;1.79e-07;34!UBERON:0002020;1.79e-07;34!UBERON:0001893;1.86e-07;34!UBERON:0002791;2.19e-07;32!UBERON:0001869;3.50e-07;32 | |||
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| ||
|short_description=p1@ENST00000423112 | |short_description=p1@ENST00000423112 | ||
}} | }} |
Latest revision as of 01:42, 1 August 2015
Short description: | p1@ENST00000423112 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000423112_5end |
Coexpression cluster: | C1306_CD4_Mast_Basophils_Natural_CD19_CD14_CD8 |
Association with transcript: | -223bp_to_ENST00000423112_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.47e-20 | 114 |
hematopoietic system | 6.98e-18 | 98 |
blood island | 6.98e-18 | 98 |
hemolymphoid system | 1.80e-14 | 108 |
neural tube | 3.04e-14 | 56 |
neural rod | 3.04e-14 | 56 |
future spinal cord | 3.04e-14 | 56 |
neural keel | 3.04e-14 | 56 |
bone marrow | 1.66e-13 | 76 |
regional part of nervous system | 2.32e-13 | 53 |
regional part of brain | 2.32e-13 | 53 |
central nervous system | 9.16e-13 | 81 |
nervous system | 1.47e-12 | 89 |
brain | 3.49e-11 | 68 |
future brain | 3.49e-11 | 68 |
immune system | 3.80e-11 | 93 |
bone element | 4.49e-11 | 82 |
regional part of forebrain | 1.02e-10 | 41 |
forebrain | 1.02e-10 | 41 |
anterior neural tube | 1.02e-10 | 41 |
future forebrain | 1.02e-10 | 41 |
brain grey matter | 1.29e-08 | 34 |
gray matter | 1.29e-08 | 34 |
telencephalon | 1.32e-08 | 34 |
skeletal element | 2.04e-08 | 90 |
neurectoderm | 3.19e-08 | 86 |
regional part of telencephalon | 4.66e-08 | 32 |
neural plate | 4.79e-08 | 82 |
presumptive neural plate | 4.79e-08 | 82 |
cerebral hemisphere | 7.94e-08 | 32 |
skeletal system | 1.81e-07 | 100 |