FFCP PHASE1:Mm9::chr5:139605827..139605834,-: Difference between revisions
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{{FFCP|EntrezGene=19085|HGNC=|MCL_coexpression_id=1|UniProt=P12849|association_with_transcript=-114bp_to_ENSMUST00000026973_5end|description=CAGE_peak_6_at_Prkar1b_5end|id=chr5:139605827..139605834,-|ontology_enrichment_celltype=CL:0000117!1.68e-12!23;CL:0000337!1.68e-12!23;CL:0000540!7.96e-07!33;CL:0000047!7.96e-07!33;CL:0000031!7.96e-07!33;CL:0000404!7.96e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.87e-12,23;CL:0000337,2.87e-12,23;CL:0002610,2.45e-09,3;CL:0002614,2.45e-09,3;CL:0000540,6.59e-08,33;CL:0000047,6.59e-08,33;CL:0000031,6.59e-08,33;CL:0000404,6.59e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!4.17e-25!50;UBERON:0006238!4.17e-25!50;UBERON:0000033!1.78e-24!63;UBERON:0001049!2.75e-24!52;UBERON:0005068!2.75e-24!52;UBERON:0006241!2.75e-24!52;UBERON:0007135!2.75e-24!52;UBERON:0002616!4.49e-24!49;UBERON:0001017!7.72e-23!73;UBERON:0005743!7.72e-23!73;UBERON:0002346!1.35e-22!71;UBERON:0003075!1.35e-22!71;UBERON:0007284!1.35e-22!71;UBERON:0000073!9.26e-22!75;UBERON:0001016!9.26e-22!75;UBERON:0004121!2.35e-20!102;UBERON:0000924!2.35e-20!102;UBERON:0006601!2.35e-20!102;UBERON:0003080!2.36e-17!40;UBERON:0002020!4.70e-17!34;UBERON:0003056!4.97e-17!49;UBERON:0002780!2.14e-16!39;UBERON:0001890!2.14e-16!39;UBERON:0006240!2.14e-16!39;UBERON:0002791!4.81e-15!29;UBERON:0003528!4.81e-15!29;UBERON:0001893!4.81e-15!29;UBERON:0007811!2.30e-14!86;UBERON:0000153!2.06e-13!94;UBERON:0000025!3.67e-09!114;UBERON:0002420!7.13e-09!8;UBERON:0007245!7.13e-09!8;UBERON:0010009!7.13e-09!8;UBERON:0010011!7.13e-09!8;UBERON:0000454!7.13e-09!8;UBERON:0004111!1.06e-08!122;UBERON:0000956!2.68e-08!21;UBERON:0001869!2.68e-08!21;UBERON:0000203!2.68e-08!21;UBERON:0002619!3.24e-08!17;UBERON:0002021!3.74e-08!10;UBERON:0000411!3.74e-08!10;UBERON:0001950!3.74e-08!10;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12;UBERON:0002298!1.76e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.00e-37,54;UBERON:0001049,2.26e-33,52;UBERON:0005068,2.26e-33,52;UBERON:0006241,2.26e-33,52;UBERON:0007135,2.26e-33,52;UBERON:0001017,2.98e-33,73;UBERON:0001016,3.29e-32,75;UBERON:0000955,5.96e-32,47;UBERON:0006238,5.96e-32,47;UBERON:0002616,8.20e-30,46;UBERON:0002346,4.41e-26,64;UBERON:0003075,4.41e-26,64;UBERON:0007284,4.41e-26,64;UBERON:0004121,3.45e-24,95;UBERON:0000924,3.45e-24,95;UBERON:0006601,3.45e-24,95;UBERON:0003080,1.95e-23,40;UBERON:0002020,3.10e-22,34;UBERON:0010371,3.50e-22,73;UBERON:0002780,1.91e-21,39;UBERON:0001890,1.91e-21,39;UBERON:0006240,1.91e-21,39;UBERON:0003528,4.83e-21,29;UBERON:0002791,4.83e-21,29;UBERON:0001893,4.83e-21,29;UBERON:0003056,2.56e-18,49;UBERON:0010314,1.90e-16,92;UBERON:0002420,4.45e-16,8;UBERON:0007245,4.45e-16,8;UBERON:0010009,4.45e-16,8;UBERON:0010011,4.45e-16,8;UBERON:0000454,4.45e-16,8;UBERON:0002021,1.96e-12,10;UBERON:0000411,1.96e-12,10;UBERON:0001950,1.96e-12,10;UBERON:0000025,3.45e-12,114;UBERON:0002950,5.11e-12,4;UBERON:0001891,5.11e-12,4;UBERON:0009616,5.11e-12,4;UBERON:0010286,5.11e-12,4;UBERON:0004111,5.10e-11,122;UBERON:0003076,3.33e-10,12;UBERON:0003057,3.33e-10,12;UBERON:0002038,2.45e-09,3;UBERON:0009663,2.45e-09,3;UBERON:0009661,2.45e-09,3;UBERON:0000125,2.45e-09,3;UBERON:0002308,2.45e-09,3;UBERON:0004684,2.45e-09,3;UBERON:0002275,2.45e-09,3;UBERON:0000956,3.25e-09,21;UBERON:0001869,3.25e-09,21;UBERON:0000203,3.25e-09,21;UBERON:0002619,4.19e-09,17;UBERON:0011216,1.01e-08,194;UBERON:0000369,1.18e-08,5;UBERON:0002435,1.18e-08,5;UBERON:0000204,1.18e-08,5;UBERON:0010082,1.18e-08,5;UBERON:0004733,1.39e-07,6;UBERON:0004732,1.39e-07,6;UBERON:0002028,1.39e-07,6;UBERON:0007277,1.39e-07,6;UBERON:0007023,9.97e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0.270011876663381,0,0,1.10434270475807,0.244981598429908,0.287536413054709,0,4.40463523997555,2.17068474744819,1.84327839907492,0.659431438650969,1.18933936683133,1.56274011167028,3.35019598801657,2.25105044012672,1.83357897332172,1.17851434189467,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,1.17112318804619,2.93225389538837,0,0,0,0,2.84602214869163,2.74500361691176,1.00523481690292,4.51943232499919,5.11430914660661,1.66230435647648,1.94689515681309,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,2.3131894342054,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.60550589987792,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0,0,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0,1.5107877947794,2.02506750069542,4.05289082901798,3.17199686288943,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.999242311751784,0,0,0,0,0|short_description=p6@Prkar1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19085 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P12849 | |||
|association_with_transcript=-114bp_to_ENSMUST00000026973_5end | |||
|cluster_id=chr5:139605827..139605834,- | |||
|description=CAGE_peak_6_at_Prkar1b_5end | |||
|id=chr5:139605827..139605834,- | |||
|ontology_enrichment_celltype=CL:0000117!1.68e-12!23;CL:0000337!1.68e-12!23;CL:0000540!7.96e-07!33;CL:0000047!7.96e-07!33;CL:0000031!7.96e-07!33;CL:0000404!7.96e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.87e-12,23;CL:0000337,2.87e-12,23;CL:0002610,2.45e-09,3;CL:0002614,2.45e-09,3;CL:0000540,6.59e-08,33;CL:0000047,6.59e-08,33;CL:0000031,6.59e-08,33;CL:0000404,6.59e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.17e-25!50;UBERON:0006238!4.17e-25!50;UBERON:0000033!1.78e-24!63;UBERON:0001049!2.75e-24!52;UBERON:0005068!2.75e-24!52;UBERON:0006241!2.75e-24!52;UBERON:0007135!2.75e-24!52;UBERON:0002616!4.49e-24!49;UBERON:0001017!7.72e-23!73;UBERON:0005743!7.72e-23!73;UBERON:0002346!1.35e-22!71;UBERON:0003075!1.35e-22!71;UBERON:0007284!1.35e-22!71;UBERON:0000073!9.26e-22!75;UBERON:0001016!9.26e-22!75;UBERON:0004121!2.35e-20!102;UBERON:0000924!2.35e-20!102;UBERON:0006601!2.35e-20!102;UBERON:0003080!2.36e-17!40;UBERON:0002020!4.70e-17!34;UBERON:0003056!4.97e-17!49;UBERON:0002780!2.14e-16!39;UBERON:0001890!2.14e-16!39;UBERON:0006240!2.14e-16!39;UBERON:0002791!4.81e-15!29;UBERON:0003528!4.81e-15!29;UBERON:0001893!4.81e-15!29;UBERON:0007811!2.30e-14!86;UBERON:0000153!2.06e-13!94;UBERON:0000025!3.67e-09!114;UBERON:0002420!7.13e-09!8;UBERON:0007245!7.13e-09!8;UBERON:0010009!7.13e-09!8;UBERON:0010011!7.13e-09!8;UBERON:0000454!7.13e-09!8;UBERON:0004111!1.06e-08!122;UBERON:0000956!2.68e-08!21;UBERON:0001869!2.68e-08!21;UBERON:0000203!2.68e-08!21;UBERON:0002619!3.24e-08!17;UBERON:0002021!3.74e-08!10;UBERON:0000411!3.74e-08!10;UBERON:0001950!3.74e-08!10;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12;UBERON:0002298!1.76e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.00e-37,54;UBERON:0001049,2.26e-33,52;UBERON:0005068,2.26e-33,52;UBERON:0006241,2.26e-33,52;UBERON:0007135,2.26e-33,52;UBERON:0001017,2.98e-33,73;UBERON:0001016,3.29e-32,75;UBERON:0000955,5.96e-32,47;UBERON:0006238,5.96e-32,47;UBERON:0002616,8.20e-30,46;UBERON:0002346,4.41e-26,64;UBERON:0003075,4.41e-26,64;UBERON:0007284,4.41e-26,64;UBERON:0004121,3.45e-24,95;UBERON:0000924,3.45e-24,95;UBERON:0006601,3.45e-24,95;UBERON:0003080,1.95e-23,40;UBERON:0002020,3.10e-22,34;UBERON:0010371,3.50e-22,73;UBERON:0002780,1.91e-21,39;UBERON:0001890,1.91e-21,39;UBERON:0006240,1.91e-21,39;UBERON:0003528,4.83e-21,29;UBERON:0002791,4.83e-21,29;UBERON:0001893,4.83e-21,29;UBERON:0003056,2.56e-18,49;UBERON:0010314,1.90e-16,92;UBERON:0002420,4.45e-16,8;UBERON:0007245,4.45e-16,8;UBERON:0010009,4.45e-16,8;UBERON:0010011,4.45e-16,8;UBERON:0000454,4.45e-16,8;UBERON:0002021,1.96e-12,10;UBERON:0000411,1.96e-12,10;UBERON:0001950,1.96e-12,10;UBERON:0000025,3.45e-12,114;UBERON:0002950,5.11e-12,4;UBERON:0001891,5.11e-12,4;UBERON:0009616,5.11e-12,4;UBERON:0010286,5.11e-12,4;UBERON:0004111,5.10e-11,122;UBERON:0003076,3.33e-10,12;UBERON:0003057,3.33e-10,12;UBERON:0002038,2.45e-09,3;UBERON:0009663,2.45e-09,3;UBERON:0009661,2.45e-09,3;UBERON:0000125,2.45e-09,3;UBERON:0002308,2.45e-09,3;UBERON:0004684,2.45e-09,3;UBERON:0002275,2.45e-09,3;UBERON:0000956,3.25e-09,21;UBERON:0001869,3.25e-09,21;UBERON:0000203,3.25e-09,21;UBERON:0002619,4.19e-09,17;UBERON:0011216,1.01e-08,194;UBERON:0000369,1.18e-08,5;UBERON:0002435,1.18e-08,5;UBERON:0000204,1.18e-08,5;UBERON:0010082,1.18e-08,5;UBERON:0004733,1.39e-07,6;UBERON:0004732,1.39e-07,6;UBERON:0002028,1.39e-07,6;UBERON:0007277,1.39e-07,6;UBERON:0007023,9.97e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0.270011876663381,0,0,1.10434270475807,0.244981598429908,0.287536413054709,0,4.40463523997555,2.17068474744819,1.84327839907492,0.659431438650969,1.18933936683133,1.56274011167028,3.35019598801657,2.25105044012672,1.83357897332172,1.17851434189467,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,1.17112318804619,2.93225389538837,0,0,0,0,2.84602214869163,2.74500361691176,1.00523481690292,4.51943232499919,5.11430914660661,1.66230435647648,1.94689515681309,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,2.3131894342054,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.60550589987792,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0,0,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0,1.5107877947794,2.02506750069542,4.05289082901798,3.17199686288943,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.999242311751784,0,0,0,0,0 | |||
|short_description=p6@Prkar1b | |||
}} |
Revision as of 22:45, 3 August 2015
Short description: | p6@Prkar1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Prkar1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -114bp_to_ENSMUST00000026973_5end |
EntrezGene: | 19085 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.87e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.87e-12 | 23 |
raphe nuclei neuron | 2.45e-09 | 3 |
neuron of the substantia nigra | 2.45e-09 | 3 |
neuron | 6.59e-08 | 33 |
neuronal stem cell | 6.59e-08 | 33 |
neuroblast | 6.59e-08 | 33 |
electrically signaling cell | 6.59e-08 | 33 |