FFCP PHASE1:Mm9::chr3:88004207..88004240,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-304bp_to_ENSMUST00000167043_5end | |association_with_transcript=-304bp_to_ENSMUST00000167043_5end | ||
|cluster_id=chr3:88004207..88004240,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000167043_5end | |description=CAGE_peak_2_at_ENSMUST00000167043_5end | ||
|id=chr3:88004207..88004240,+ | |id=chr3:88004207..88004240,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.35e-24!23;CL:0000337!2.35e-24!23;CL:0002319!3.63e-18!43;CL:0000221!1.71e-17!44;CL:0000133!1.71e-17!44;CL:0000540!3.13e-14!33;CL:0000047!3.13e-14!33;CL:0000031!3.13e-14!33;CL:0000404!3.13e-14!33;CL:0000055!4.69e-14!50;CL:0000393!9.45e-11!39;CL:0000211!9.45e-11!39;CL:0002321!3.67e-07!70;CL:0000220!3.67e-07!70;CL:0002609!5.24e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-36,23;CL:0000337,1.29e-36,23;CL:0002319,1.68e-25,43;CL:0000221,9.83e-25,44;CL:0000133,9.83e-25,44;CL:0000540,2.19e-23,33;CL:0000047,2.19e-23,33;CL:0000031,2.19e-23,33;CL:0000404,2.19e-23,33;CL:0000393,9.92e-19,39;CL:0000211,9.92e-19,39;CL:0002321,1.45e-12,70;CL:0002609,6.24e-10,6;CL:0002612,9.55e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.20e-33!73;UBERON:0005743!2.20e-33!73;UBERON:0000073!4.45e-33!75;UBERON:0001016!4.45e-33!75;UBERON:0002020!6.69e-31!34;UBERON:0001049!1.72e-30!52;UBERON:0005068!1.72e-30!52;UBERON:0006241!1.72e-30!52;UBERON:0007135!1.72e-30!52;UBERON:0000955!1.08e-27!50;UBERON:0006238!1.08e-27!50;UBERON:0002616!1.14e-26!49;UBERON:0002791!7.59e-25!29;UBERON:0003528!7.59e-25!29;UBERON:0001893!7.59e-25!29;UBERON:0003080!8.07e-21!40;UBERON:0002780!5.22e-20!39;UBERON:0001890!5.22e-20!39;UBERON:0006240!5.22e-20!39;UBERON:0004121!5.70e-20!102;UBERON:0000924!5.70e-20!102;UBERON:0006601!5.70e-20!102;UBERON:0000033!7.90e-20!63;UBERON:0002346!5.45e-19!71;UBERON:0003075!5.45e-19!71;UBERON:0007284!5.45e-19!71;UBERON:0000956!1.89e-17!21;UBERON:0001869!1.89e-17!21;UBERON:0000203!1.89e-17!21;UBERON:0003056!8.97e-16!49;UBERON:0002619!1.08e-13!17;UBERON:0007811!8.44e-11!86;UBERON:0003076!3.69e-10!12;UBERON:0003057!3.69e-10!12;UBERON:0000153!8.52e-09!94;UBERON:0002021!1.34e-08!10;UBERON:0000411!1.34e-08!10;UBERON:0001950!1.34e-08!10;UBERON:0002420!1.72e-08!8;UBERON:0007245!1.72e-08!8;UBERON:0010009!1.72e-08!8;UBERON:0010011!1.72e-08!8;UBERON:0000454!1.72e-08!8;UBERON:0002240!5.94e-08!6;UBERON:0005174!5.94e-08!6;UBERON:0001137!5.94e-08!6;UBERON:0001948!3.13e-07!5;UBERON:0002315!3.13e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.16e-43,73;UBERON:0001016,1.81e-41,75;UBERON:0000073,5.93e-40,54;UBERON:0002020,1.43e-37,34;UBERON:0001049,5.55e-37,52;UBERON:0005068,5.55e-37,52;UBERON:0006241,5.55e-37,52;UBERON:0007135,5.55e-37,52;UBERON:0004121,3.42e-30,95;UBERON:0000924,3.42e-30,95;UBERON:0006601,3.42e-30,95;UBERON:0000955,5.48e-29,47;UBERON:0006238,5.48e-29,47;UBERON:0003528,1.02e-28,29;UBERON:0002791,1.02e-28,29;UBERON:0001893,1.02e-28,29;UBERON:0002346,4.21e-28,64;UBERON:0003075,4.21e-28,64;UBERON:0007284,4.21e-28,64;UBERON:0002616,1.43e-27,46;UBERON:0003080,1.68e-24,40;UBERON:0010371,2.28e-23,73;UBERON:0002780,2.48e-23,39;UBERON:0001890,2.48e-23,39;UBERON:0006240,2.48e-23,39;UBERON:0000956,6.31e-20,21;UBERON:0001869,6.31e-20,21;UBERON:0000203,6.31e-20,21;UBERON:0003056,1.42e-18,49;UBERON:0010314,1.91e-16,92;UBERON:0002619,1.86e-14,17;UBERON:0003076,7.81e-13,12;UBERON:0003057,7.81e-13,12;UBERON:0002240,2.23e-11,6;UBERON:0005174,2.23e-11,6;UBERON:0001137,2.23e-11,6;UBERON:0000025,2.30e-11,114;UBERON:0001948,2.84e-10,5;UBERON:0002315,2.84e-10,5;UBERON:0004111,5.48e-10,122;UBERON:0002420,8.32e-10,8;UBERON:0007245,8.32e-10,8;UBERON:0010009,8.32e-10,8;UBERON:0010011,8.32e-10,8;UBERON:0000454,8.32e-10,8;UBERON:0011216,1.20e-08,194;UBERON:0002021,1.52e-08,10;UBERON:0000411,1.52e-08,10;UBERON:0001950,1.52e-08,10;UBERON:0001954,2.27e-07,7;UBERON:0003022,2.27e-07,7;UBERON:0002421,2.27e-07,7;UBERON:0000349,2.27e-07,7;UBERON:0002600,2.27e-07,7;UBERON:0002257,9.55e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2703773457067,1.97717564461025,0.388859798148567,0.55994568650145,2.87505128729943,0,0,0,0,0,0,9.91350658212029,13.2247744818008,12.0427966666174,0.677689064138264,0,0,0,0,2.09720077362883,4.99483796918021,4.97710139080693,7.96535036156975,6.73039876324422,23.7090317055157,19.8781686856452,2.69479758272899,2.49198224647415,1.83843757322004,2.20231761998777,3.44755812830007,3.07213066512487,3.56092976871523,2.65314166446988,6.25096044668112,2.51264699101243,2.8138130501584,2.59757021220577,19.1508580557884,19.7896636310753,16.2167517868012,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,2.24685959107234,0.915001205637253,4.39790232395025,1.04294592115366,0.511430914660661,3.32460871295296,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,6.89460902941206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,0.572895513439397,3.43706364687375,0.685082519770642,1.5107877947794,1.35004500046361,3.60256962579376,2.26571204492102,1.55328093525546,1.14166082342594,2.39414924040619,3.41467211508268,0.243106717068294,1.04806581313991,2.20612210140017,2.44471400581777,0.618105171716683,0,2.02157769411038,0.25347929989024,0.943131706930381,0.842773567228942,0.384150914429216,0.861532034334199,0,0.579421629724277,0.578727661391115,0.824171801606613,0.735994600671987,0,0.354951612318675,0.715308569841963,0.436039249896986,1.12931256498397,0.592302255241736,1.09756783723664,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.788035859004508,0.409231043169689,0.77468420592983,0.192906610981141,2.74791635731741,0.935726433781634,0.429742108096597,0.191288332068843,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2703773457067,1.97717564461025,0.388859798148567,0.55994568650145,2.87505128729943,0,0,0,0,0,0,9.91350658212029,13.2247744818008,12.0427966666174,0.677689064138264,0,0,0,0,2.09720077362883,4.99483796918021,4.97710139080693,7.96535036156975,6.73039876324422,23.7090317055157,19.8781686856452,2.69479758272899,2.49198224647415,1.83843757322004,2.20231761998777,3.44755812830007,3.07213066512487,3.56092976871523,2.65314166446988,6.25096044668112,2.51264699101243,2.8138130501584,2.59757021220577,19.1508580557884,19.7896636310753,16.2167517868012,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,2.24685959107234,0.915001205637253,4.39790232395025,1.04294592115366,0.511430914660661,3.32460871295296,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,6.89460902941206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,0.572895513439397,3.43706364687375,0.685082519770642,1.5107877947794,1.35004500046361,3.60256962579376,2.26571204492102,1.55328093525546,1.14166082342594,2.39414924040619,3.41467211508268,0.243106717068294,1.04806581313991,2.20612210140017,2.44471400581777,0.618105171716683,0,2.02157769411038,0.25347929989024,0.943131706930381,0.842773567228942,0.384150914429216,0.861532034334199,0,0.579421629724277,0.578727661391115,0.824171801606613,0.735994600671987,0,0.354951612318675,0.715308569841963,0.436039249896986,1.12931256498397,0.592302255241736,1.09756783723664,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.788035859004508,0.409231043169689,0.77468420592983,0.192906610981141,2.74791635731741,0.935726433781634,0.429742108096597,0.191288332068843,0.441182838239031,0 | ||
|short_description=p2@ENSMUST00000167043 | |short_description=p2@ENSMUST00000167043 | ||
}} | }} |
Latest revision as of 03:41, 4 August 2015
Short description: | p2@ENSMUST00000167043 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000167043_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -304bp_to_ENSMUST00000167043_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.29e-36 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-36 | 23 |
neural cell | 1.68e-25 | 43 |
ectodermal cell | 9.83e-25 | 44 |
neurectodermal cell | 9.83e-25 | 44 |
neuron | 2.19e-23 | 33 |
neuronal stem cell | 2.19e-23 | 33 |
neuroblast | 2.19e-23 | 33 |
electrically signaling cell | 2.19e-23 | 33 |
electrically responsive cell | 9.92e-19 | 39 |
electrically active cell | 9.92e-19 | 39 |
embryonic cell | 1.45e-12 | 70 |
neuron of cerebral cortex | 6.24e-10 | 6 |
neuron of the ventral spinal cord | 9.55e-07 | 3 |