FFCP PHASE1:Mm9::chr7:133991422..133991433,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13446|HGNC=|MCL_coexpression_id=537|UniProt=D3Z126|association_with_transcript=-7bp_to_ENSMUST00000147257_5end|description=CAGE_peak_4_at_Doc2a_5end|id=chr7:133991422..133991433,+|ontology_enrichment_celltype=CL:0000117!8.65e-14!23;CL:0000337!8.65e-14!23;CL:0000540!4.26e-08!33;CL:0000047!4.26e-08!33;CL:0000031!4.26e-08!33;CL:0000404!4.26e-08!33|ontology_enrichment_celltype_v019_2=CL:0002612,1.35e-12,3;CL:0000117,2.26e-12,23;CL:0000337,2.26e-12,23;CL:0002614,1.22e-11,3;CL:0002611,1.66e-09,2;CL:0000540,3.29e-08,33;CL:0000047,3.29e-08,33;CL:0000031,3.29e-08,33;CL:0000404,3.29e-08,33;CL:0000393,9.77e-07,39;CL:0000211,9.77e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.99e-25!71;UBERON:0003075!8.99e-25!71;UBERON:0007284!8.99e-25!71;UBERON:0001049!3.15e-23!52;UBERON:0005068!3.15e-23!52;UBERON:0006241!3.15e-23!52;UBERON:0007135!3.15e-23!52;UBERON:0000033!3.27e-21!63;UBERON:0003056!3.34e-21!49;UBERON:0002020!9.21e-21!34;UBERON:0001017!1.20e-19!73;UBERON:0005743!1.20e-19!73;UBERON:0002616!1.97e-19!49;UBERON:0000955!7.60e-19!50;UBERON:0006238!7.60e-19!50;UBERON:0000073!8.44e-19!75;UBERON:0001016!8.44e-19!75;UBERON:0004121!9.45e-19!102;UBERON:0000924!9.45e-19!102;UBERON:0006601!9.45e-19!102;UBERON:0003080!9.58e-17!40;UBERON:0002780!1.20e-15!39;UBERON:0001890!1.20e-15!39;UBERON:0006240!1.20e-15!39;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0002021!2.39e-14!10;UBERON:0000411!2.39e-14!10;UBERON:0001950!2.39e-14!10;UBERON:0007811!1.62e-12!86;UBERON:0000153!1.54e-10!94;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002619!5.75e-10!17;UBERON:0002240!2.18e-09!6;UBERON:0005174!2.18e-09!6;UBERON:0001137!2.18e-09!6;UBERON:0002298!7.45e-09!6;UBERON:0001948!2.43e-08!5;UBERON:0002315!2.43e-08!5;UBERON:0003076!3.74e-07!12;UBERON:0003057!3.74e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.11e-31,54;UBERON:0002020,8.76e-31,34;UBERON:0001049,5.25e-30,52;UBERON:0005068,5.25e-30,52;UBERON:0006241,5.25e-30,52;UBERON:0007135,5.25e-30,52;UBERON:0002021,1.31e-24,10;UBERON:0000411,1.31e-24,10;UBERON:0001950,1.31e-24,10;UBERON:0002346,9.38e-24,64;UBERON:0003075,9.38e-24,64;UBERON:0007284,9.38e-24,64;UBERON:0001017,1.48e-22,73;UBERON:0001016,7.28e-22,75;UBERON:0001948,1.95e-20,5;UBERON:0002315,1.95e-20,5;UBERON:0010371,2.08e-20,73;UBERON:0002616,9.68e-19,46;UBERON:0000955,2.79e-18,47;UBERON:0006238,2.79e-18,47;UBERON:0003528,2.32e-17,29;UBERON:0002791,2.32e-17,29;UBERON:0001893,2.32e-17,29;UBERON:0002240,5.29e-17,6;UBERON:0005174,5.29e-17,6;UBERON:0001137,5.29e-17,6;UBERON:0003080,1.18e-16,40;UBERON:0004121,1.57e-16,95;UBERON:0000924,1.57e-16,95;UBERON:0006601,1.57e-16,95;UBERON:0010314,1.76e-15,92;UBERON:0003076,1.83e-15,12;UBERON:0003057,1.83e-15,12;UBERON:0002950,3.05e-15,4;UBERON:0001891,3.05e-15,4;UBERON:0009616,3.05e-15,4;UBERON:0010286,3.05e-15,4;UBERON:0002780,1.27e-14,39;UBERON:0001890,1.27e-14,39;UBERON:0006240,1.27e-14,39;UBERON:0000956,4.62e-14,21;UBERON:0001869,4.62e-14,21;UBERON:0000203,4.62e-14,21;UBERON:0002619,4.99e-14,17;UBERON:0003056,3.90e-13,49;UBERON:0002257,1.35e-12,3;UBERON:0000025,8.19e-12,114;UBERON:0002038,1.22e-11,3;UBERON:0009663,1.22e-11,3;UBERON:0009661,1.22e-11,3;UBERON:0000125,1.22e-11,3;UBERON:0002308,1.22e-11,3;UBERON:0004111,8.37e-11,122;UBERON:0002256,1.66e-09,2;UBERON:0001896,2.95e-08,2;UBERON:0002298,2.95e-08,2;UBERON:0005290,2.95e-08,2;UBERON:0010096,2.95e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,3.42781181284564,3.3130281142742,0.122490799214954,0,0,1.10115880999389,0.893811366596314,0.921639199537461,0.263772575460388,0.548925861614458,0,1.11673199600552,1.12552522006336,1.5279824777681,5.30331453852602,2.42031857358475,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79748767285787,0,0.251308704225729,1.56441888173049,2.55715457330331,0.41557608911912,1.46017136760982,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,0,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.12385412991454,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,2.76195141904306,1.71868654031819,3.09335728218638,1.37016503954128,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,2.07104124700728,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0,0,0,0.512201219238954,0.17230640686684,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p4@Doc2a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13446 | |||
|HGNC= | |||
|MCL_coexpression_id=537 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z126 | |||
|association_with_transcript=-7bp_to_ENSMUST00000147257_5end | |||
|cluster_id=chr7:133991422..133991433,+ | |||
|description=CAGE_peak_4_at_Doc2a_5end | |||
|id=chr7:133991422..133991433,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.65e-14!23;CL:0000337!8.65e-14!23;CL:0000540!4.26e-08!33;CL:0000047!4.26e-08!33;CL:0000031!4.26e-08!33;CL:0000404!4.26e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.35e-12,3;CL:0000117,2.26e-12,23;CL:0000337,2.26e-12,23;CL:0002614,1.22e-11,3;CL:0002611,1.66e-09,2;CL:0000540,3.29e-08,33;CL:0000047,3.29e-08,33;CL:0000031,3.29e-08,33;CL:0000404,3.29e-08,33;CL:0000393,9.77e-07,39;CL:0000211,9.77e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.99e-25!71;UBERON:0003075!8.99e-25!71;UBERON:0007284!8.99e-25!71;UBERON:0001049!3.15e-23!52;UBERON:0005068!3.15e-23!52;UBERON:0006241!3.15e-23!52;UBERON:0007135!3.15e-23!52;UBERON:0000033!3.27e-21!63;UBERON:0003056!3.34e-21!49;UBERON:0002020!9.21e-21!34;UBERON:0001017!1.20e-19!73;UBERON:0005743!1.20e-19!73;UBERON:0002616!1.97e-19!49;UBERON:0000955!7.60e-19!50;UBERON:0006238!7.60e-19!50;UBERON:0000073!8.44e-19!75;UBERON:0001016!8.44e-19!75;UBERON:0004121!9.45e-19!102;UBERON:0000924!9.45e-19!102;UBERON:0006601!9.45e-19!102;UBERON:0003080!9.58e-17!40;UBERON:0002780!1.20e-15!39;UBERON:0001890!1.20e-15!39;UBERON:0006240!1.20e-15!39;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0002021!2.39e-14!10;UBERON:0000411!2.39e-14!10;UBERON:0001950!2.39e-14!10;UBERON:0007811!1.62e-12!86;UBERON:0000153!1.54e-10!94;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002619!5.75e-10!17;UBERON:0002240!2.18e-09!6;UBERON:0005174!2.18e-09!6;UBERON:0001137!2.18e-09!6;UBERON:0002298!7.45e-09!6;UBERON:0001948!2.43e-08!5;UBERON:0002315!2.43e-08!5;UBERON:0003076!3.74e-07!12;UBERON:0003057!3.74e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.11e-31,54;UBERON:0002020,8.76e-31,34;UBERON:0001049,5.25e-30,52;UBERON:0005068,5.25e-30,52;UBERON:0006241,5.25e-30,52;UBERON:0007135,5.25e-30,52;UBERON:0002021,1.31e-24,10;UBERON:0000411,1.31e-24,10;UBERON:0001950,1.31e-24,10;UBERON:0002346,9.38e-24,64;UBERON:0003075,9.38e-24,64;UBERON:0007284,9.38e-24,64;UBERON:0001017,1.48e-22,73;UBERON:0001016,7.28e-22,75;UBERON:0001948,1.95e-20,5;UBERON:0002315,1.95e-20,5;UBERON:0010371,2.08e-20,73;UBERON:0002616,9.68e-19,46;UBERON:0000955,2.79e-18,47;UBERON:0006238,2.79e-18,47;UBERON:0003528,2.32e-17,29;UBERON:0002791,2.32e-17,29;UBERON:0001893,2.32e-17,29;UBERON:0002240,5.29e-17,6;UBERON:0005174,5.29e-17,6;UBERON:0001137,5.29e-17,6;UBERON:0003080,1.18e-16,40;UBERON:0004121,1.57e-16,95;UBERON:0000924,1.57e-16,95;UBERON:0006601,1.57e-16,95;UBERON:0010314,1.76e-15,92;UBERON:0003076,1.83e-15,12;UBERON:0003057,1.83e-15,12;UBERON:0002950,3.05e-15,4;UBERON:0001891,3.05e-15,4;UBERON:0009616,3.05e-15,4;UBERON:0010286,3.05e-15,4;UBERON:0002780,1.27e-14,39;UBERON:0001890,1.27e-14,39;UBERON:0006240,1.27e-14,39;UBERON:0000956,4.62e-14,21;UBERON:0001869,4.62e-14,21;UBERON:0000203,4.62e-14,21;UBERON:0002619,4.99e-14,17;UBERON:0003056,3.90e-13,49;UBERON:0002257,1.35e-12,3;UBERON:0000025,8.19e-12,114;UBERON:0002038,1.22e-11,3;UBERON:0009663,1.22e-11,3;UBERON:0009661,1.22e-11,3;UBERON:0000125,1.22e-11,3;UBERON:0002308,1.22e-11,3;UBERON:0004111,8.37e-11,122;UBERON:0002256,1.66e-09,2;UBERON:0001896,2.95e-08,2;UBERON:0002298,2.95e-08,2;UBERON:0005290,2.95e-08,2;UBERON:0010096,2.95e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,3.42781181284564,3.3130281142742,0.122490799214954,0,0,1.10115880999389,0.893811366596314,0.921639199537461,0.263772575460388,0.548925861614458,0,1.11673199600552,1.12552522006336,1.5279824777681,5.30331453852602,2.42031857358475,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79748767285787,0,0.251308704225729,1.56441888173049,2.55715457330331,0.41557608911912,1.46017136760982,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,0,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.12385412991454,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,2.76195141904306,1.71868654031819,3.09335728218638,1.37016503954128,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,2.07104124700728,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0,0,0,0.512201219238954,0.17230640686684,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p4@Doc2a | |||
}} |
Revision as of 06:02, 4 August 2015
Short description: | p4@Doc2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Doc2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:537 |
Association with transcript: | -7bp_to_ENSMUST00000147257_5end |
EntrezGene: | 13446 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.35e-12 | 3 |
CNS neuron (sensu Vertebrata) | 2.26e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.26e-12 | 23 |
neuron of the substantia nigra | 1.22e-11 | 3 |
neuron of the dorsal spinal cord | 1.66e-09 | 2 |
neuron | 3.29e-08 | 33 |
neuronal stem cell | 3.29e-08 | 33 |
neuroblast | 3.29e-08 | 33 |
electrically signaling cell | 3.29e-08 | 33 |
electrically responsive cell | 9.77e-07 | 39 |
electrically active cell | 9.77e-07 | 39 |