FFCP PHASE1:Mm9::chr12:11443304..11443315,-: Difference between revisions
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{{FFCP|EntrezGene=26950|HGNC=|MCL_coexpression_id=121|UniProt=P62761,Q4W4C9|association_with_transcript=139bp_to_ENSMUST00000072299,NM_012038,uc011ykf.1_5end|description=CAGE_peak_3_at_Vsnl1_5end|id=chr12:11443304..11443315,-|ontology_enrichment_celltype=CL:0000117!1.89e-10!23;CL:0000337!1.89e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-12,23;CL:0000337,1.10e-12,23;CL:0000540,8.04e-08,33;CL:0000047,8.04e-08,33;CL:0000031,8.04e-08,33;CL:0000404,8.04e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.17e-17!71;UBERON:0003075!1.17e-17!71;UBERON:0007284!1.17e-17!71;UBERON:0000033!2.37e-17!63;UBERON:0001049!7.29e-17!52;UBERON:0005068!7.29e-17!52;UBERON:0006241!7.29e-17!52;UBERON:0007135!7.29e-17!52;UBERON:0002020!5.88e-16!34;UBERON:0000955!3.61e-15!50;UBERON:0006238!3.61e-15!50;UBERON:0001017!8.49e-15!73;UBERON:0005743!8.49e-15!73;UBERON:0004121!1.44e-14!102;UBERON:0000924!1.44e-14!102;UBERON:0006601!1.44e-14!102;UBERON:0002616!1.64e-14!49;UBERON:0000073!6.14e-14!75;UBERON:0001016!6.14e-14!75;UBERON:0003056!5.34e-13!49;UBERON:0002791!4.53e-12!29;UBERON:0003528!4.53e-12!29;UBERON:0001893!4.53e-12!29;UBERON:0007811!6.67e-11!86;UBERON:0003080!2.05e-10!40;UBERON:0002780!1.09e-09!39;UBERON:0001890!1.09e-09!39;UBERON:0006240!1.09e-09!39;UBERON:0002021!3.43e-09!10;UBERON:0000411!3.43e-09!10;UBERON:0001950!3.43e-09!10;UBERON:0000153!3.72e-09!94;UBERON:0000956!3.14e-08!21;UBERON:0001869!3.14e-08!21;UBERON:0000203!3.14e-08!21;UBERON:0003076!6.61e-08!12;UBERON:0003057!6.61e-08!12;UBERON:0002619!8.68e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.62e-32,54;UBERON:0002346,1.50e-30,64;UBERON:0003075,1.50e-30,64;UBERON:0007284,1.50e-30,64;UBERON:0001049,2.87e-29,52;UBERON:0005068,2.87e-29,52;UBERON:0006241,2.87e-29,52;UBERON:0007135,2.87e-29,52;UBERON:0001017,3.65e-28,73;UBERON:0001016,3.70e-27,75;UBERON:0004121,4.19e-26,95;UBERON:0000924,4.19e-26,95;UBERON:0006601,4.19e-26,95;UBERON:0010371,1.23e-25,73;UBERON:0002020,5.11e-24,34;UBERON:0000955,9.21e-22,47;UBERON:0006238,9.21e-22,47;UBERON:0002616,1.53e-20,46;UBERON:0003056,6.55e-19,49;UBERON:0010314,1.98e-18,92;UBERON:0002021,3.91e-17,10;UBERON:0000411,3.91e-17,10;UBERON:0001950,3.91e-17,10;UBERON:0003528,1.00e-16,29;UBERON:0002791,1.00e-16,29;UBERON:0001893,1.00e-16,29;UBERON:0003080,6.82e-16,40;UBERON:0003076,9.47e-16,12;UBERON:0003057,9.47e-16,12;UBERON:0002780,1.54e-14,39;UBERON:0001890,1.54e-14,39;UBERON:0006240,1.54e-14,39;UBERON:0002240,1.11e-11,6;UBERON:0005174,1.11e-11,6;UBERON:0001137,1.11e-11,6;UBERON:0002619,2.89e-11,17;UBERON:0000956,1.52e-10,21;UBERON:0001869,1.52e-10,21;UBERON:0000203,1.52e-10,21;UBERON:0001948,1.01e-09,5;UBERON:0002315,1.01e-09,5;UBERON:0000025,6.72e-09,114;UBERON:0004111,1.71e-08,122;UBERON:0002950,2.70e-08,4;UBERON:0001891,2.70e-08,4;UBERON:0009616,2.70e-08,4;UBERON:0010286,2.70e-08,4;UBERON:0002420,1.07e-07,8;UBERON:0007245,1.07e-07,8;UBERON:0010009,1.07e-07,8;UBERON:0010011,1.07e-07,8;UBERON:0000454,1.07e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,10.2834354385369,11.7060326704355,0.122490799214954,0.191690942036473,0,6.60695285996332,9.95961237064464,13.9781945263182,0.527545150920775,1.09785172322892,0,15.9134309430787,8.4414391504752,6.72312290217964,9.1334861496837,16.5151149726959,4.84638559145781,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0,0,28.9852989041432,35.3964934514739,0,0,0,0,20.2217363196511,10.5225138648284,2.38743269014442,15.6441888173049,10.2286182932132,14.9607392082883,10.3834408363365,0,0,0,0.841767423545896,0,0.459804208866946,0,1.05493372485001,1.02054748726992,1.15302348256365,1.49922759295566,1.81092359517311,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,10.9350773253346,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0,0,0,0,0.315270288212382,0.44292937929755,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,29.5413085577537,20.9808919000044,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,43.5749459724698,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.66183396182839,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,1.07184189539533,0,6.7770221114048,6.90487854760765,9.16632821503035,7.56154002312225,3.42541259885321,5.2877572817279,5.40018000185445,13.0593148935024,12.2348450425735,12.9440077937955,0,0,0.512200817262403,0.243106717068294,0,0.551530525350042,1.11123363900808,1.64828045791115,0,0.505394423527595,0,0.565879024158229,0.842773567228942,0.832326981263301,0.918967503289812,1.90517476513229,0.695305955669133,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.564656282491984,0.423073039458382,0.182927972872773,0.789209134313529,1.22223702461276,0.561142271657738,0.118635018124174,0.788035859004508,0,0.929621047115796,0.192906610981141,0.249810577937946,0.701794825336225,0,2.10417165275728,0.220591419119515,0|short_description=p3@Vsnl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:26950 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P62761,uniprot:Q4W4C9 | |||
|association_with_transcript=139bp_to_ENSMUST00000072299,NM_012038,uc011ykf.1_5end | |||
|cluster_id=chr12:11443304..11443315,- | |||
|description=CAGE_peak_3_at_Vsnl1_5end | |||
|id=chr12:11443304..11443315,- | |||
|ontology_enrichment_celltype=CL:0000117!1.89e-10!23;CL:0000337!1.89e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-12,23;CL:0000337,1.10e-12,23;CL:0000540,8.04e-08,33;CL:0000047,8.04e-08,33;CL:0000031,8.04e-08,33;CL:0000404,8.04e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.17e-17!71;UBERON:0003075!1.17e-17!71;UBERON:0007284!1.17e-17!71;UBERON:0000033!2.37e-17!63;UBERON:0001049!7.29e-17!52;UBERON:0005068!7.29e-17!52;UBERON:0006241!7.29e-17!52;UBERON:0007135!7.29e-17!52;UBERON:0002020!5.88e-16!34;UBERON:0000955!3.61e-15!50;UBERON:0006238!3.61e-15!50;UBERON:0001017!8.49e-15!73;UBERON:0005743!8.49e-15!73;UBERON:0004121!1.44e-14!102;UBERON:0000924!1.44e-14!102;UBERON:0006601!1.44e-14!102;UBERON:0002616!1.64e-14!49;UBERON:0000073!6.14e-14!75;UBERON:0001016!6.14e-14!75;UBERON:0003056!5.34e-13!49;UBERON:0002791!4.53e-12!29;UBERON:0003528!4.53e-12!29;UBERON:0001893!4.53e-12!29;UBERON:0007811!6.67e-11!86;UBERON:0003080!2.05e-10!40;UBERON:0002780!1.09e-09!39;UBERON:0001890!1.09e-09!39;UBERON:0006240!1.09e-09!39;UBERON:0002021!3.43e-09!10;UBERON:0000411!3.43e-09!10;UBERON:0001950!3.43e-09!10;UBERON:0000153!3.72e-09!94;UBERON:0000956!3.14e-08!21;UBERON:0001869!3.14e-08!21;UBERON:0000203!3.14e-08!21;UBERON:0003076!6.61e-08!12;UBERON:0003057!6.61e-08!12;UBERON:0002619!8.68e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.62e-32,54;UBERON:0002346,1.50e-30,64;UBERON:0003075,1.50e-30,64;UBERON:0007284,1.50e-30,64;UBERON:0001049,2.87e-29,52;UBERON:0005068,2.87e-29,52;UBERON:0006241,2.87e-29,52;UBERON:0007135,2.87e-29,52;UBERON:0001017,3.65e-28,73;UBERON:0001016,3.70e-27,75;UBERON:0004121,4.19e-26,95;UBERON:0000924,4.19e-26,95;UBERON:0006601,4.19e-26,95;UBERON:0010371,1.23e-25,73;UBERON:0002020,5.11e-24,34;UBERON:0000955,9.21e-22,47;UBERON:0006238,9.21e-22,47;UBERON:0002616,1.53e-20,46;UBERON:0003056,6.55e-19,49;UBERON:0010314,1.98e-18,92;UBERON:0002021,3.91e-17,10;UBERON:0000411,3.91e-17,10;UBERON:0001950,3.91e-17,10;UBERON:0003528,1.00e-16,29;UBERON:0002791,1.00e-16,29;UBERON:0001893,1.00e-16,29;UBERON:0003080,6.82e-16,40;UBERON:0003076,9.47e-16,12;UBERON:0003057,9.47e-16,12;UBERON:0002780,1.54e-14,39;UBERON:0001890,1.54e-14,39;UBERON:0006240,1.54e-14,39;UBERON:0002240,1.11e-11,6;UBERON:0005174,1.11e-11,6;UBERON:0001137,1.11e-11,6;UBERON:0002619,2.89e-11,17;UBERON:0000956,1.52e-10,21;UBERON:0001869,1.52e-10,21;UBERON:0000203,1.52e-10,21;UBERON:0001948,1.01e-09,5;UBERON:0002315,1.01e-09,5;UBERON:0000025,6.72e-09,114;UBERON:0004111,1.71e-08,122;UBERON:0002950,2.70e-08,4;UBERON:0001891,2.70e-08,4;UBERON:0009616,2.70e-08,4;UBERON:0010286,2.70e-08,4;UBERON:0002420,1.07e-07,8;UBERON:0007245,1.07e-07,8;UBERON:0010009,1.07e-07,8;UBERON:0010011,1.07e-07,8;UBERON:0000454,1.07e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,10.2834354385369,11.7060326704355,0.122490799214954,0.191690942036473,0,6.60695285996332,9.95961237064464,13.9781945263182,0.527545150920775,1.09785172322892,0,15.9134309430787,8.4414391504752,6.72312290217964,9.1334861496837,16.5151149726959,4.84638559145781,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0,0,28.9852989041432,35.3964934514739,0,0,0,0,20.2217363196511,10.5225138648284,2.38743269014442,15.6441888173049,10.2286182932132,14.9607392082883,10.3834408363365,0,0,0,0.841767423545896,0,0.459804208866946,0,1.05493372485001,1.02054748726992,1.15302348256365,1.49922759295566,1.81092359517311,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,10.9350773253346,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0,0,0,0,0.315270288212382,0.44292937929755,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,29.5413085577537,20.9808919000044,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,43.5749459724698,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.66183396182839,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,1.07184189539533,0,6.7770221114048,6.90487854760765,9.16632821503035,7.56154002312225,3.42541259885321,5.2877572817279,5.40018000185445,13.0593148935024,12.2348450425735,12.9440077937955,0,0,0.512200817262403,0.243106717068294,0,0.551530525350042,1.11123363900808,1.64828045791115,0,0.505394423527595,0,0.565879024158229,0.842773567228942,0.832326981263301,0.918967503289812,1.90517476513229,0.695305955669133,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.564656282491984,0.423073039458382,0.182927972872773,0.789209134313529,1.22223702461276,0.561142271657738,0.118635018124174,0.788035859004508,0,0.929621047115796,0.192906610981141,0.249810577937946,0.701794825336225,0,2.10417165275728,0.220591419119515,0 | |||
|short_description=p3@Vsnl1 | |||
}} |
Revision as of 19:37, 4 August 2015
Short description: | p3@Vsnl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vsnl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | 139bp_to_ENSMUST00000072299, NM_012038, uc011ykf.1_5end |
EntrezGene: | 26950 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.10e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-12 | 23 |
neuron | 8.04e-08 | 33 |
neuronal stem cell | 8.04e-08 | 33 |
neuroblast | 8.04e-08 | 33 |
electrically signaling cell | 8.04e-08 | 33 |