FFCP PHASE1:Mm9::chr9:75415295..75415309,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=158 | |MCL_coexpression_id=158 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:75415295..75415309,- | |||
|description=CAGE_peak_at_chr9:75415295..75415309,- | |description=CAGE_peak_at_chr9:75415295..75415309,- | ||
|id=chr9:75415295..75415309,- | |id=chr9:75415295..75415309,- | ||
|ontology_enrichment_celltype=CL:0000117!1.12e-13!23;CL:0000337!1.12e-13!23;CL:0000540!1.70e-13!33;CL:0000047!1.70e-13!33;CL:0000031!1.70e-13!33;CL:0000404!1.70e-13!33;CL:0000221!4.34e-12!44;CL:0000133!4.34e-12!44;CL:0002319!7.31e-12!43;CL:0000393!1.33e-09!39;CL:0000211!1.33e-09!39;CL:0000055!2.04e-08!50 | |ontology_enrichment_celltype=CL:0000117!1.12e-13!23;CL:0000337!1.12e-13!23;CL:0000540!1.70e-13!33;CL:0000047!1.70e-13!33;CL:0000031!1.70e-13!33;CL:0000404!1.70e-13!33;CL:0000221!4.34e-12!44;CL:0000133!4.34e-12!44;CL:0002319!7.31e-12!43;CL:0000393!1.33e-09!39;CL:0000211!1.33e-09!39;CL:0000055!2.04e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.91e-17,23;CL:0000337,3.91e-17,23;CL:0000540,5.32e-11,33;CL:0000047,5.32e-11,33;CL:0000031,5.32e-11,33;CL:0000404,5.32e-11,33;CL:0000393,7.63e-09,39;CL:0000211,7.63e-09,39;CL:0002610,3.18e-08,3;CL:0002319,9.55e-08,43;CL:0002614,1.01e-07,3;CL:0000221,1.67e-07,44;CL:0000133,1.67e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.40e-29!71;UBERON:0003075!2.40e-29!71;UBERON:0007284!2.40e-29!71;UBERON:0004121!9.15e-29!102;UBERON:0000924!9.15e-29!102;UBERON:0006601!9.15e-29!102;UBERON:0000073!7.69e-28!75;UBERON:0001016!7.69e-28!75;UBERON:0001017!3.21e-27!73;UBERON:0005743!3.21e-27!73;UBERON:0001049!1.47e-25!52;UBERON:0005068!1.47e-25!52;UBERON:0006241!1.47e-25!52;UBERON:0007135!1.47e-25!52;UBERON:0000033!3.94e-25!63;UBERON:0000955!7.59e-25!50;UBERON:0006238!7.59e-25!50;UBERON:0002616!3.52e-24!49;UBERON:0002020!6.18e-24!34;UBERON:0003056!2.58e-22!49;UBERON:0002791!6.32e-21!29;UBERON:0003528!6.32e-21!29;UBERON:0001893!6.32e-21!29;UBERON:0003080!5.56e-20!40;UBERON:0002780!2.85e-19!39;UBERON:0001890!2.85e-19!39;UBERON:0006240!2.85e-19!39;UBERON:0000956!3.00e-15!21;UBERON:0001869!3.00e-15!21;UBERON:0000203!3.00e-15!21;UBERON:0007811!2.32e-13!86;UBERON:0002619!6.30e-13!17;UBERON:0000153!1.61e-11!94;UBERON:0002021!1.13e-09!10;UBERON:0000411!1.13e-09!10;UBERON:0001950!1.13e-09!10;UBERON:0000025!6.40e-07!114;UBERON:0002420!7.76e-07!8;UBERON:0007245!7.76e-07!8;UBERON:0010009!7.76e-07!8;UBERON:0010011!7.76e-07!8;UBERON:0000454!7.76e-07!8 | |ontology_enrichment_uberon=UBERON:0002346!2.40e-29!71;UBERON:0003075!2.40e-29!71;UBERON:0007284!2.40e-29!71;UBERON:0004121!9.15e-29!102;UBERON:0000924!9.15e-29!102;UBERON:0006601!9.15e-29!102;UBERON:0000073!7.69e-28!75;UBERON:0001016!7.69e-28!75;UBERON:0001017!3.21e-27!73;UBERON:0005743!3.21e-27!73;UBERON:0001049!1.47e-25!52;UBERON:0005068!1.47e-25!52;UBERON:0006241!1.47e-25!52;UBERON:0007135!1.47e-25!52;UBERON:0000033!3.94e-25!63;UBERON:0000955!7.59e-25!50;UBERON:0006238!7.59e-25!50;UBERON:0002616!3.52e-24!49;UBERON:0002020!6.18e-24!34;UBERON:0003056!2.58e-22!49;UBERON:0002791!6.32e-21!29;UBERON:0003528!6.32e-21!29;UBERON:0001893!6.32e-21!29;UBERON:0003080!5.56e-20!40;UBERON:0002780!2.85e-19!39;UBERON:0001890!2.85e-19!39;UBERON:0006240!2.85e-19!39;UBERON:0000956!3.00e-15!21;UBERON:0001869!3.00e-15!21;UBERON:0000203!3.00e-15!21;UBERON:0007811!2.32e-13!86;UBERON:0002619!6.30e-13!17;UBERON:0000153!1.61e-11!94;UBERON:0002021!1.13e-09!10;UBERON:0000411!1.13e-09!10;UBERON:0001950!1.13e-09!10;UBERON:0000025!6.40e-07!114;UBERON:0002420!7.76e-07!8;UBERON:0007245!7.76e-07!8;UBERON:0010009!7.76e-07!8;UBERON:0010011!7.76e-07!8;UBERON:0000454!7.76e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.69e-43,54;UBERON:0002020,2.83e-40,34;UBERON:0001049,7.83e-39,52;UBERON:0005068,7.83e-39,52;UBERON:0006241,7.83e-39,52;UBERON:0007135,7.83e-39,52;UBERON:0003528,1.77e-36,29;UBERON:0002791,1.77e-36,29;UBERON:0001893,1.77e-36,29;UBERON:0001017,2.00e-34,73;UBERON:0001016,2.55e-33,75;UBERON:0003080,4.74e-33,40;UBERON:0002616,6.36e-33,46;UBERON:0000955,4.32e-32,47;UBERON:0006238,4.32e-32,47;UBERON:0002780,3.05e-31,39;UBERON:0001890,3.05e-31,39;UBERON:0006240,3.05e-31,39;UBERON:0002346,2.73e-30,64;UBERON:0003075,2.73e-30,64;UBERON:0007284,2.73e-30,64;UBERON:0003056,6.67e-26,49;UBERON:0010371,1.01e-25,73;UBERON:0002021,2.91e-25,10;UBERON:0000411,2.91e-25,10;UBERON:0001950,2.91e-25,10;UBERON:0004121,8.31e-25,95;UBERON:0000924,8.31e-25,95;UBERON:0006601,8.31e-25,95;UBERON:0000956,5.18e-24,21;UBERON:0001869,5.18e-24,21;UBERON:0000203,5.18e-24,21;UBERON:0002619,4.79e-23,17;UBERON:0010314,5.23e-19,92;UBERON:0000025,5.04e-14,114;UBERON:0002420,1.99e-13,8;UBERON:0007245,1.99e-13,8;UBERON:0010009,1.99e-13,8;UBERON:0010011,1.99e-13,8;UBERON:0000454,1.99e-13,8;UBERON:0004111,1.18e-12,122;UBERON:0002950,1.29e-09,4;UBERON:0001891,1.29e-09,4;UBERON:0009616,1.29e-09,4;UBERON:0010286,1.29e-09,4;UBERON:0011216,2.06e-08,194;UBERON:0004684,3.18e-08,3;UBERON:0002275,3.18e-08,3;UBERON:0002038,1.01e-07,3;UBERON:0009663,1.01e-07,3;UBERON:0009661,1.01e-07,3;UBERON:0000125,1.01e-07,3;UBERON:0002308,1.01e-07,3;UBERON:0000369,1.68e-07,5;UBERON:0002435,1.68e-07,5;UBERON:0000204,1.68e-07,5;UBERON:0010082,1.68e-07,5;UBERON:0000483,7.79e-07,174 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0,0,1.24427534770173,0.945041568321835,0.420649922702764,1.14260393761521,0.220868540951614,0.857435594504678,1.24599112323707,0.919218786610021,2.20231761998777,2.68143409978894,3.5329502648936,0.791317726381163,1.64677758484337,1.04182674111352,1.11673199600552,2.8138130501584,2.44477196442896,5.00868595305235,4.41352210477219,0.745597783301202,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.49790639404823,1.83000241127451,2.51308704225729,2.43354048269187,2.55715457330331,2.49345653471472,2.27137768294861,0.203678727700633,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.340182495756639,0.768682321709099,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0.146199987425332,0,0.134206418760372,1.47202963994889,2.36680608472354,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0.585400943573396,0,0.44292937929755,0,0.327726629431476,0.172684981865896,0,0,0,0,0,1.44495530989013,1.28932855251423,0,0,0,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0.728341908464944,0,0,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0.484393280087717,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,4.51801474093653,8.28585425712918,7.44764167471216,6.35856774671644,2.05524755931193,3.0215755895588,2.70009000092722,2.70192721934532,4.53142408984205,3.10656187051092,0.62272408550506,0.399024873401031,0,0,0,0.183843508450014,1.33348036680969,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.256100609619477,0.34461281373368,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.73171189149109,0.526139422875686,0.814824683075171,1.68342681497322,0.711810108745045,0.0985044823755635,0.818462086339379,0,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0,0,1.24427534770173,0.945041568321835,0.420649922702764,1.14260393761521,0.220868540951614,0.857435594504678,1.24599112323707,0.919218786610021,2.20231761998777,2.68143409978894,3.5329502648936,0.791317726381163,1.64677758484337,1.04182674111352,1.11673199600552,2.8138130501584,2.44477196442896,5.00868595305235,4.41352210477219,0.745597783301202,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.49790639404823,1.83000241127451,2.51308704225729,2.43354048269187,2.55715457330331,2.49345653471472,2.27137768294861,0.203678727700633,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.340182495756639,0.768682321709099,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0.146199987425332,0,0.134206418760372,1.47202963994889,2.36680608472354,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0.585400943573396,0,0.44292937929755,0,0.327726629431476,0.172684981865896,0,0,0,0,0,1.44495530989013,1.28932855251423,0,0,0,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0.728341908464944,0,0,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0.484393280087717,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,4.51801474093653,8.28585425712918,7.44764167471216,6.35856774671644,2.05524755931193,3.0215755895588,2.70009000092722,2.70192721934532,4.53142408984205,3.10656187051092,0.62272408550506,0.399024873401031,0,0,0,0.183843508450014,1.33348036680969,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.256100609619477,0.34461281373368,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.73171189149109,0.526139422875686,0.814824683075171,1.68342681497322,0.711810108745045,0.0985044823755635,0.818462086339379,0,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr9:75415295..75415309,- | |short_description=p@chr9:75415295..75415309,- | ||
}} | }} |
Latest revision as of 15:36, 5 August 2015
Short description: | p@chr9:75415295..75415309, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:75415295..75415309, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.91e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.91e-17 | 23 |
neuron | 5.32e-11 | 33 |
neuronal stem cell | 5.32e-11 | 33 |
neuroblast | 5.32e-11 | 33 |
electrically signaling cell | 5.32e-11 | 33 |
electrically responsive cell | 7.63e-09 | 39 |
electrically active cell | 7.63e-09 | 39 |
raphe nuclei neuron | 3.18e-08 | 3 |
neural cell | 9.55e-08 | 43 |
neuron of the substantia nigra | 1.01e-07 | 3 |
ectodermal cell | 1.67e-07 | 44 |
neurectodermal cell | 1.67e-07 | 44 |