FFCP PHASE1:Mm9::chr2:96158092..96158104,+: Difference between revisions
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{{FFCP|EntrezGene=241568|HGNC=|MCL_coexpression_id=20|UniProt=Q8C031|association_with_transcript=-221bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end|description=CAGE_peak_5_at_Lrrc4c_5end|id=chr2:96158092..96158104,+|ontology_enrichment_celltype=CL:0000117!8.05e-10!23;CL:0000337!8.05e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-16,23;CL:0000337,4.03e-16,23;CL:0000540,4.20e-10,33;CL:0000047,4.20e-10,33;CL:0000031,4.20e-10,33;CL:0000404,4.20e-10,33;CL:0000393,5.33e-08,39;CL:0000211,5.33e-08,39;CL:0002612,4.09e-07,3;CL:0002319,6.19e-07,43;CL:0002614,8.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.43e-19!63;UBERON:0001049!2.72e-18!52;UBERON:0005068!2.72e-18!52;UBERON:0006241!2.72e-18!52;UBERON:0007135!2.72e-18!52;UBERON:0000955!2.19e-16!50;UBERON:0006238!2.19e-16!50;UBERON:0002020!3.88e-16!34;UBERON:0002346!6.63e-16!71;UBERON:0003075!6.63e-16!71;UBERON:0007284!6.63e-16!71;UBERON:0002616!1.11e-15!49;UBERON:0001017!1.91e-15!73;UBERON:0005743!1.91e-15!73;UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0003056!3.12e-14!49;UBERON:0002791!4.73e-12!29;UBERON:0003528!4.73e-12!29;UBERON:0001893!4.73e-12!29;UBERON:0004121!6.97e-12!102;UBERON:0000924!6.97e-12!102;UBERON:0006601!6.97e-12!102;UBERON:0003080!2.00e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0007811!9.44e-10!86;UBERON:0000025!3.17e-09!114;UBERON:0002021!5.62e-09!10;UBERON:0000411!5.62e-09!10;UBERON:0001950!5.62e-09!10;UBERON:0004111!1.44e-08!122;UBERON:0003076!3.15e-08!12;UBERON:0003057!3.15e-08!12;UBERON:0000153!3.83e-08!94;UBERON:0002420!5.21e-08!8;UBERON:0007245!5.21e-08!8;UBERON:0010009!5.21e-08!8;UBERON:0010011!5.21e-08!8;UBERON:0000454!5.21e-08!8;UBERON:0002619!1.76e-07!17;UBERON:0002298!5.47e-07!6;UBERON:0002240!7.98e-07!6;UBERON:0005174!7.98e-07!6;UBERON:0001137!7.98e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-36,54;UBERON:0001049,2.30e-33,52;UBERON:0005068,2.30e-33,52;UBERON:0006241,2.30e-33,52;UBERON:0007135,2.30e-33,52;UBERON:0001017,3.30e-30,73;UBERON:0001016,3.69e-29,75;UBERON:0002346,5.35e-29,64;UBERON:0003075,5.35e-29,64;UBERON:0007284,5.35e-29,64;UBERON:0002020,7.52e-28,34;UBERON:0000955,4.48e-25,47;UBERON:0006238,4.48e-25,47;UBERON:0010371,2.32e-24,73;UBERON:0004121,8.76e-24,95;UBERON:0000924,8.76e-24,95;UBERON:0006601,8.76e-24,95;UBERON:0002616,1.01e-23,46;UBERON:0010314,3.35e-20,92;UBERON:0003528,9.71e-20,29;UBERON:0002791,9.71e-20,29;UBERON:0001893,9.71e-20,29;UBERON:0003080,9.42e-19,40;UBERON:0002780,3.18e-17,39;UBERON:0001890,3.18e-17,39;UBERON:0006240,3.18e-17,39;UBERON:0003056,4.15e-17,49;UBERON:0003076,1.44e-16,12;UBERON:0003057,1.44e-16,12;UBERON:0002420,6.81e-15,8;UBERON:0007245,6.81e-15,8;UBERON:0010009,6.81e-15,8;UBERON:0010011,6.81e-15,8;UBERON:0000454,6.81e-15,8;UBERON:0002021,2.77e-14,10;UBERON:0000411,2.77e-14,10;UBERON:0001950,2.77e-14,10;UBERON:0000025,1.16e-12,114;UBERON:0002240,1.88e-12,6;UBERON:0005174,1.88e-12,6;UBERON:0001137,1.88e-12,6;UBERON:0004111,2.80e-11,122;UBERON:0001948,2.19e-10,5;UBERON:0002315,2.19e-10,5;UBERON:0000369,1.11e-09,5;UBERON:0002435,1.11e-09,5;UBERON:0000204,1.11e-09,5;UBERON:0010082,1.11e-09,5;UBERON:0002619,2.55e-09,17;UBERON:0002950,7.89e-09,4;UBERON:0001891,7.89e-09,4;UBERON:0009616,7.89e-09,4;UBERON:0010286,7.89e-09,4;UBERON:0000956,8.38e-09,21;UBERON:0001869,8.38e-09,21;UBERON:0000203,8.38e-09,21;UBERON:0002257,4.09e-07,3;UBERON:0002038,8.48e-07,3;UBERON:0009663,8.48e-07,3;UBERON:0009661,8.48e-07,3;UBERON:0000125,8.48e-07,3;UBERON:0002308,8.48e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.57085885963423,2.42955395046775,0.489963196859816,0.0958454710182364,0,1.10115880999389,2.93680877595932,4.45458946443106,1.45074916503213,2.47016637726506,2.08365348222704,3.35019598801657,3.37657566019008,2.29197371665215,5.30331453852602,4.55589378557129,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,5.23616767033638,0,0,0,0,8.08869452786043,8.6925114535539,1.38219787324151,2.60736480288415,1.53429274398198,4.1557608911912,6.16516799657479,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,0.748401490664606,1.0249097622788,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0.720248245844059,0.946978942340841,1.96764231747404,1.07986979021165,0.930135779001631,0.536546802799238,0.817357396570186,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.536825675041487,1.05144974282064,0.308713837137853,0,0,0,0.696710015581316,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.532020700926821,0,0,0,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,4.14292712856459,1.14579102687879,1.71853182343688,2.74033007908257,1.5107877947794,2.02506750069542,3.15224842256954,1.81256963593682,3.10656187051092,0,0.399024873401031,0.853668028770671,0.729320151204882,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,1.28367683836726,0.252697211763798,0,1.13175804831646,0.842773567228942,0.768301828858431,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.376437521661322,0.338458431566706,0,1.05227884575137,0.271608227691724,0,1.06771516311757,0.985044823755635,1.22769312950907,0.619747364743864,0,0,0.467863216890817,0.644613162144895,0.382576664137687,0,0.231867835620421|short_description=p5@Lrrc4c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241568 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C031 | |||
|association_with_transcript=-221bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end | |||
|cluster_id=chr2:96158092..96158104,+ | |||
|description=CAGE_peak_5_at_Lrrc4c_5end | |||
|id=chr2:96158092..96158104,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.05e-10!23;CL:0000337!8.05e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-16,23;CL:0000337,4.03e-16,23;CL:0000540,4.20e-10,33;CL:0000047,4.20e-10,33;CL:0000031,4.20e-10,33;CL:0000404,4.20e-10,33;CL:0000393,5.33e-08,39;CL:0000211,5.33e-08,39;CL:0002612,4.09e-07,3;CL:0002319,6.19e-07,43;CL:0002614,8.48e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.43e-19!63;UBERON:0001049!2.72e-18!52;UBERON:0005068!2.72e-18!52;UBERON:0006241!2.72e-18!52;UBERON:0007135!2.72e-18!52;UBERON:0000955!2.19e-16!50;UBERON:0006238!2.19e-16!50;UBERON:0002020!3.88e-16!34;UBERON:0002346!6.63e-16!71;UBERON:0003075!6.63e-16!71;UBERON:0007284!6.63e-16!71;UBERON:0002616!1.11e-15!49;UBERON:0001017!1.91e-15!73;UBERON:0005743!1.91e-15!73;UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0003056!3.12e-14!49;UBERON:0002791!4.73e-12!29;UBERON:0003528!4.73e-12!29;UBERON:0001893!4.73e-12!29;UBERON:0004121!6.97e-12!102;UBERON:0000924!6.97e-12!102;UBERON:0006601!6.97e-12!102;UBERON:0003080!2.00e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0007811!9.44e-10!86;UBERON:0000025!3.17e-09!114;UBERON:0002021!5.62e-09!10;UBERON:0000411!5.62e-09!10;UBERON:0001950!5.62e-09!10;UBERON:0004111!1.44e-08!122;UBERON:0003076!3.15e-08!12;UBERON:0003057!3.15e-08!12;UBERON:0000153!3.83e-08!94;UBERON:0002420!5.21e-08!8;UBERON:0007245!5.21e-08!8;UBERON:0010009!5.21e-08!8;UBERON:0010011!5.21e-08!8;UBERON:0000454!5.21e-08!8;UBERON:0002619!1.76e-07!17;UBERON:0002298!5.47e-07!6;UBERON:0002240!7.98e-07!6;UBERON:0005174!7.98e-07!6;UBERON:0001137!7.98e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-36,54;UBERON:0001049,2.30e-33,52;UBERON:0005068,2.30e-33,52;UBERON:0006241,2.30e-33,52;UBERON:0007135,2.30e-33,52;UBERON:0001017,3.30e-30,73;UBERON:0001016,3.69e-29,75;UBERON:0002346,5.35e-29,64;UBERON:0003075,5.35e-29,64;UBERON:0007284,5.35e-29,64;UBERON:0002020,7.52e-28,34;UBERON:0000955,4.48e-25,47;UBERON:0006238,4.48e-25,47;UBERON:0010371,2.32e-24,73;UBERON:0004121,8.76e-24,95;UBERON:0000924,8.76e-24,95;UBERON:0006601,8.76e-24,95;UBERON:0002616,1.01e-23,46;UBERON:0010314,3.35e-20,92;UBERON:0003528,9.71e-20,29;UBERON:0002791,9.71e-20,29;UBERON:0001893,9.71e-20,29;UBERON:0003080,9.42e-19,40;UBERON:0002780,3.18e-17,39;UBERON:0001890,3.18e-17,39;UBERON:0006240,3.18e-17,39;UBERON:0003056,4.15e-17,49;UBERON:0003076,1.44e-16,12;UBERON:0003057,1.44e-16,12;UBERON:0002420,6.81e-15,8;UBERON:0007245,6.81e-15,8;UBERON:0010009,6.81e-15,8;UBERON:0010011,6.81e-15,8;UBERON:0000454,6.81e-15,8;UBERON:0002021,2.77e-14,10;UBERON:0000411,2.77e-14,10;UBERON:0001950,2.77e-14,10;UBERON:0000025,1.16e-12,114;UBERON:0002240,1.88e-12,6;UBERON:0005174,1.88e-12,6;UBERON:0001137,1.88e-12,6;UBERON:0004111,2.80e-11,122;UBERON:0001948,2.19e-10,5;UBERON:0002315,2.19e-10,5;UBERON:0000369,1.11e-09,5;UBERON:0002435,1.11e-09,5;UBERON:0000204,1.11e-09,5;UBERON:0010082,1.11e-09,5;UBERON:0002619,2.55e-09,17;UBERON:0002950,7.89e-09,4;UBERON:0001891,7.89e-09,4;UBERON:0009616,7.89e-09,4;UBERON:0010286,7.89e-09,4;UBERON:0000956,8.38e-09,21;UBERON:0001869,8.38e-09,21;UBERON:0000203,8.38e-09,21;UBERON:0002257,4.09e-07,3;UBERON:0002038,8.48e-07,3;UBERON:0009663,8.48e-07,3;UBERON:0009661,8.48e-07,3;UBERON:0000125,8.48e-07,3;UBERON:0002308,8.48e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.57085885963423,2.42955395046775,0.489963196859816,0.0958454710182364,0,1.10115880999389,2.93680877595932,4.45458946443106,1.45074916503213,2.47016637726506,2.08365348222704,3.35019598801657,3.37657566019008,2.29197371665215,5.30331453852602,4.55589378557129,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,5.23616767033638,0,0,0,0,8.08869452786043,8.6925114535539,1.38219787324151,2.60736480288415,1.53429274398198,4.1557608911912,6.16516799657479,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,0.748401490664606,1.0249097622788,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0.720248245844059,0.946978942340841,1.96764231747404,1.07986979021165,0.930135779001631,0.536546802799238,0.817357396570186,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.536825675041487,1.05144974282064,0.308713837137853,0,0,0,0.696710015581316,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.532020700926821,0,0,0,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,4.14292712856459,1.14579102687879,1.71853182343688,2.74033007908257,1.5107877947794,2.02506750069542,3.15224842256954,1.81256963593682,3.10656187051092,0,0.399024873401031,0.853668028770671,0.729320151204882,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,1.28367683836726,0.252697211763798,0,1.13175804831646,0.842773567228942,0.768301828858431,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.376437521661322,0.338458431566706,0,1.05227884575137,0.271608227691724,0,1.06771516311757,0.985044823755635,1.22769312950907,0.619747364743864,0,0,0.467863216890817,0.644613162144895,0.382576664137687,0,0.231867835620421 | |||
|short_description=p5@Lrrc4c | |||
}} |
Revision as of 16:48, 5 August 2015
Short description: | p5@Lrrc4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lrrc4c_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -221bp_to_ENSMUST00000135431, uc008lhc.1, uc008lhd.1_5end |
EntrezGene: | 241568 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.03e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-16 | 23 |
neuron | 4.20e-10 | 33 |
neuronal stem cell | 4.20e-10 | 33 |
neuroblast | 4.20e-10 | 33 |
electrically signaling cell | 4.20e-10 | 33 |
electrically responsive cell | 5.33e-08 | 39 |
electrically active cell | 5.33e-08 | 39 |
neuron of the ventral spinal cord | 4.09e-07 | 3 |
neural cell | 6.19e-07 | 43 |
neuron of the substantia nigra | 8.48e-07 | 3 |