FFCP PHASE1:Mm9::chr3:106839074..106839099,+: Difference between revisions
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{{FFCP|EntrezGene=16491|HGNC=|MCL_coexpression_id=118|UniProt=P16390|association_with_transcript=0bp_to_ENSMUST00000052718,NM_008418,uc008qwp.2_5end|description=CAGE_peak_1_at_Kcna3_5end|id=chr3:106839074..106839099,+|ontology_enrichment_celltype=CL:0000838!1.52e-08!12;CL:0000988!2.00e-08!32;CL:0002032!2.00e-08!32;CL:0000037!2.00e-08!32;CL:0000566!2.00e-08!32;CL:0000837!2.00e-08!32;CL:0000117!5.48e-08!23;CL:0000337!5.48e-08!23;CL:0000084!5.60e-08!11;CL:0000827!5.60e-08!11;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000791!3.13e-07!9;CL:0000789!3.13e-07!9;CL:0002420!3.13e-07!9;CL:0002419!3.13e-07!9;CL:0000790!3.13e-07!9;CL:0000738!7.45e-07!17;CL:0002087!7.45e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,3.19e-09,32;CL:0002032,3.19e-09,32;CL:0000037,3.19e-09,32;CL:0000837,3.19e-09,32;CL:0000838,8.18e-09,12;CL:0000117,3.09e-08,23;CL:0000337,3.09e-08,23;CL:0000084,3.16e-08,11;CL:0000827,3.16e-08,11;CL:0000542,6.24e-08,13;CL:0000051,6.24e-08,13;CL:0000791,1.89e-07,9;CL:0000789,1.89e-07,9;CL:0002420,1.89e-07,9;CL:0002419,1.89e-07,9;CL:0000790,1.89e-07,9;CL:0002031,1.97e-07,25;CL:0000738,4.63e-07,17;CL:0002087,4.63e-07,17;CL:0000624,8.71e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.19e-16!86;UBERON:0000153!2.57e-15!94;UBERON:0002193!3.48e-12!48;UBERON:0002390!2.12e-11!45;UBERON:0003061!2.12e-11!45;UBERON:0000955!9.91e-11!50;UBERON:0006238!9.91e-11!50;UBERON:0001049!2.02e-10!52;UBERON:0005068!2.02e-10!52;UBERON:0006241!2.02e-10!52;UBERON:0007135!2.02e-10!52;UBERON:0002616!2.70e-10!49;UBERON:0000477!9.33e-10!154;UBERON:0002020!1.12e-09!34;UBERON:0003080!1.40e-09!40;UBERON:0004177!1.48e-09!29;UBERON:0001017!4.00e-09!73;UBERON:0005743!4.00e-09!73;UBERON:0002780!4.11e-09!39;UBERON:0001890!4.11e-09!39;UBERON:0006240!4.11e-09!39;UBERON:0000033!8.53e-09!63;UBERON:0003408!9.50e-09!24;UBERON:0002370!9.59e-09!23;UBERON:0000974!9.59e-09!23;UBERON:0004807!9.59e-09!23;UBERON:0005058!9.59e-09!23;UBERON:0003351!9.59e-09!23;UBERON:0009113!9.59e-09!23;UBERON:0003295!9.59e-09!23;UBERON:0009722!9.59e-09!23;UBERON:0005562!9.59e-09!23;UBERON:0007690!9.59e-09!23;UBERON:0002791!1.14e-08!29;UBERON:0003528!1.14e-08!29;UBERON:0001893!1.14e-08!29;UBERON:0003056!1.17e-08!49;UBERON:0000073!1.70e-08!75;UBERON:0001016!1.70e-08!75;UBERON:0006562!6.03e-08!24;UBERON:0001557!6.03e-08!24;UBERON:0001042!6.03e-08!24;UBERON:0008814!6.03e-08!24;UBERON:0009145!6.03e-08!24;UBERON:0001004!7.48e-08!42;UBERON:0000065!8.90e-08!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.95e-13,48;UBERON:0002405,5.95e-13,48;UBERON:0002390,3.93e-12,45;UBERON:0003061,3.93e-12,45;UBERON:0000073,7.30e-12,54;UBERON:0001049,7.63e-11,52;UBERON:0005068,7.63e-11,52;UBERON:0006241,7.63e-11,52;UBERON:0007135,7.63e-11,52;UBERON:0004177,1.83e-10,29;UBERON:0005057,1.83e-10,29;UBERON:0002020,3.34e-10,34;UBERON:0000955,6.35e-10,47;UBERON:0006238,6.35e-10,47;UBERON:0003080,7.54e-10,40;UBERON:0002370,1.17e-09,23;UBERON:0000974,1.17e-09,23;UBERON:0004807,1.17e-09,23;UBERON:0005058,1.17e-09,23;UBERON:0003351,1.17e-09,23;UBERON:0009113,1.17e-09,23;UBERON:0003295,1.17e-09,23;UBERON:0009722,1.17e-09,23;UBERON:0005562,1.17e-09,23;UBERON:0007690,1.17e-09,23;UBERON:0003408,1.20e-09,24;UBERON:0002616,1.74e-09,46;UBERON:0002780,2.31e-09,39;UBERON:0001890,2.31e-09,39;UBERON:0006240,2.31e-09,39;UBERON:0001017,2.94e-09,73;UBERON:0003528,3.71e-09,29;UBERON:0002791,3.71e-09,29;UBERON:0001893,3.71e-09,29;UBERON:0001004,5.80e-09,42;UBERON:0003056,6.77e-09,49;UBERON:0000065,6.87e-09,41;UBERON:0002346,7.42e-09,64;UBERON:0003075,7.42e-09,64;UBERON:0007284,7.42e-09,64;UBERON:0006562,1.02e-08,24;UBERON:0001557,1.02e-08,24;UBERON:0001042,1.02e-08,24;UBERON:0008814,1.02e-08,24;UBERON:0009145,1.02e-08,24;UBERON:0001016,1.27e-08,75;UBERON:0000077,2.95e-07,35;UBERON:0011216,4.64e-07,194|phase1_expression=0.80074423552397,0,0,0,0,0,0,83.2845436198167,210.056773450287,244.129300953839,77.7329575743793,100.592692493119,39.0337664243149,31.4713448708391,11.6588416635482,10.7311891716608,5.59649502502517,44.6378963981906,47.3044795939799,40.7414065726109,5.44277056966847,12.113496046508,22.2019820768095,4.7997726838022,4.81759490241057,0,0,0,1.71021077510736,3.02436155711917,1.55211357458713,0,0,0,0,0,0,1.67412652294763,3.906676722619,1.0470474879476,0.588231488031014,2.04913645487534,0.485510353031154,0.125896817975577,0.304130793658544,0.367093504323363,0,0.436050312760893,0.219686182734472,0,0,0,40.6033906659722,54.4021606508508,74.9489172087695,0,0.286533439938757,0,8.49729135610311,11.6378015439847,11.4089652631112,0,0,1.3498495759221,2.96659908770092,0.7104801149461,2.39680088414724,1.92109152660777,15.1386833970377,13.3655878948374,11.3575479129746,9.42648248532552,6.18431914664518,11.7591167246356,6.80502844229478,13.7882817991503,23.1243350098716,12.896421146604,16.5895055916743,8.44072241473241,6.86157327018072,9.37644067002168,13.6799669510677,16.8828783009504,18.488587980994,12.374400589894,6.54909731675874,4.4735866998072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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16491 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P16390 | |||
|association_with_transcript=0bp_to_ENSMUST00000052718,NM_008418,uc008qwp.2_5end | |||
|cluster_id=chr3:106839074..106839099,+ | |||
|description=CAGE_peak_1_at_Kcna3_5end | |||
|id=chr3:106839074..106839099,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.52e-08!12;CL:0000988!2.00e-08!32;CL:0002032!2.00e-08!32;CL:0000037!2.00e-08!32;CL:0000566!2.00e-08!32;CL:0000837!2.00e-08!32;CL:0000117!5.48e-08!23;CL:0000337!5.48e-08!23;CL:0000084!5.60e-08!11;CL:0000827!5.60e-08!11;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000791!3.13e-07!9;CL:0000789!3.13e-07!9;CL:0002420!3.13e-07!9;CL:0002419!3.13e-07!9;CL:0000790!3.13e-07!9;CL:0000738!7.45e-07!17;CL:0002087!7.45e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.19e-09,32;CL:0002032,3.19e-09,32;CL:0000037,3.19e-09,32;CL:0000837,3.19e-09,32;CL:0000838,8.18e-09,12;CL:0000117,3.09e-08,23;CL:0000337,3.09e-08,23;CL:0000084,3.16e-08,11;CL:0000827,3.16e-08,11;CL:0000542,6.24e-08,13;CL:0000051,6.24e-08,13;CL:0000791,1.89e-07,9;CL:0000789,1.89e-07,9;CL:0002420,1.89e-07,9;CL:0002419,1.89e-07,9;CL:0000790,1.89e-07,9;CL:0002031,1.97e-07,25;CL:0000738,4.63e-07,17;CL:0002087,4.63e-07,17;CL:0000624,8.71e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.19e-16!86;UBERON:0000153!2.57e-15!94;UBERON:0002193!3.48e-12!48;UBERON:0002390!2.12e-11!45;UBERON:0003061!2.12e-11!45;UBERON:0000955!9.91e-11!50;UBERON:0006238!9.91e-11!50;UBERON:0001049!2.02e-10!52;UBERON:0005068!2.02e-10!52;UBERON:0006241!2.02e-10!52;UBERON:0007135!2.02e-10!52;UBERON:0002616!2.70e-10!49;UBERON:0000477!9.33e-10!154;UBERON:0002020!1.12e-09!34;UBERON:0003080!1.40e-09!40;UBERON:0004177!1.48e-09!29;UBERON:0001017!4.00e-09!73;UBERON:0005743!4.00e-09!73;UBERON:0002780!4.11e-09!39;UBERON:0001890!4.11e-09!39;UBERON:0006240!4.11e-09!39;UBERON:0000033!8.53e-09!63;UBERON:0003408!9.50e-09!24;UBERON:0002370!9.59e-09!23;UBERON:0000974!9.59e-09!23;UBERON:0004807!9.59e-09!23;UBERON:0005058!9.59e-09!23;UBERON:0003351!9.59e-09!23;UBERON:0009113!9.59e-09!23;UBERON:0003295!9.59e-09!23;UBERON:0009722!9.59e-09!23;UBERON:0005562!9.59e-09!23;UBERON:0007690!9.59e-09!23;UBERON:0002791!1.14e-08!29;UBERON:0003528!1.14e-08!29;UBERON:0001893!1.14e-08!29;UBERON:0003056!1.17e-08!49;UBERON:0000073!1.70e-08!75;UBERON:0001016!1.70e-08!75;UBERON:0006562!6.03e-08!24;UBERON:0001557!6.03e-08!24;UBERON:0001042!6.03e-08!24;UBERON:0008814!6.03e-08!24;UBERON:0009145!6.03e-08!24;UBERON:0001004!7.48e-08!42;UBERON:0000065!8.90e-08!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.95e-13,48;UBERON:0002405,5.95e-13,48;UBERON:0002390,3.93e-12,45;UBERON:0003061,3.93e-12,45;UBERON:0000073,7.30e-12,54;UBERON:0001049,7.63e-11,52;UBERON:0005068,7.63e-11,52;UBERON:0006241,7.63e-11,52;UBERON:0007135,7.63e-11,52;UBERON:0004177,1.83e-10,29;UBERON:0005057,1.83e-10,29;UBERON:0002020,3.34e-10,34;UBERON:0000955,6.35e-10,47;UBERON:0006238,6.35e-10,47;UBERON:0003080,7.54e-10,40;UBERON:0002370,1.17e-09,23;UBERON:0000974,1.17e-09,23;UBERON:0004807,1.17e-09,23;UBERON:0005058,1.17e-09,23;UBERON:0003351,1.17e-09,23;UBERON:0009113,1.17e-09,23;UBERON:0003295,1.17e-09,23;UBERON:0009722,1.17e-09,23;UBERON:0005562,1.17e-09,23;UBERON:0007690,1.17e-09,23;UBERON:0003408,1.20e-09,24;UBERON:0002616,1.74e-09,46;UBERON:0002780,2.31e-09,39;UBERON:0001890,2.31e-09,39;UBERON:0006240,2.31e-09,39;UBERON:0001017,2.94e-09,73;UBERON:0003528,3.71e-09,29;UBERON:0002791,3.71e-09,29;UBERON:0001893,3.71e-09,29;UBERON:0001004,5.80e-09,42;UBERON:0003056,6.77e-09,49;UBERON:0000065,6.87e-09,41;UBERON:0002346,7.42e-09,64;UBERON:0003075,7.42e-09,64;UBERON:0007284,7.42e-09,64;UBERON:0006562,1.02e-08,24;UBERON:0001557,1.02e-08,24;UBERON:0001042,1.02e-08,24;UBERON:0008814,1.02e-08,24;UBERON:0009145,1.02e-08,24;UBERON:0001016,1.27e-08,75;UBERON:0000077,2.95e-07,35;UBERON:0011216,4.64e-07,194 | |||
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| |||
|short_description=p1@Kcna3 | |||
}} |
Revision as of 19:52, 5 August 2015
Short description: | p1@Kcna3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcna3_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 0bp_to_ENSMUST00000052718, NM_008418, uc008qwp.2_5end |
EntrezGene: | 16491 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.19e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.19e-09 | 32 |
hematopoietic stem cell | 3.19e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.19e-09 | 32 |
lymphoid lineage restricted progenitor cell | 8.18e-09 | 12 |
CNS neuron (sensu Vertebrata) | 3.09e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.09e-08 | 23 |
T cell | 3.16e-08 | 11 |
pro-T cell | 3.16e-08 | 11 |
lymphocyte | 6.24e-08 | 13 |
common lymphoid progenitor | 6.24e-08 | 13 |
mature alpha-beta T cell | 1.89e-07 | 9 |
alpha-beta T cell | 1.89e-07 | 9 |
immature T cell | 1.89e-07 | 9 |
mature T cell | 1.89e-07 | 9 |
immature alpha-beta T cell | 1.89e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 1.97e-07 | 25 |
leukocyte | 4.63e-07 | 17 |
nongranular leukocyte | 4.63e-07 | 17 |
CD4-positive, alpha-beta T cell | 8.71e-07 | 8 |