FFCP PHASE1:Hg19::chr10:105253611..105253627,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9148 | |EntrezGene=9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |HGNC=7761 | ||
|TSSclassifier=strong | |||
|UniProt=B4DS86,O76050 | |UniProt=B4DS86,O76050 | ||
|association_with_transcript=-107bp_to_NM_004210,uc001kxh.2_5end | |association_with_transcript=-107bp_to_NM_004210,uc001kxh.2_5end | ||
|cluster_id=chr10:105253611..105253627,+ | |||
|coexpression_cluster_id=C1559 | |||
|description=CAGE_peak_10_at_NEURL_5end | |description=CAGE_peak_10_at_NEURL_5end | ||
|id=chr10:105253611..105253627,+ | |id=chr10:105253611..105253627,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.33e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.66e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-47!57;UBERON:0005068!1.70e-47!57;UBERON:0006241!1.70e-47!57;UBERON:0007135!1.70e-47!57;UBERON:0001017!4.81e-42!82;UBERON:0002780!8.60e-42!41;UBERON:0001890!8.60e-42!41;UBERON:0006240!8.60e-42!41;UBERON:0002616!2.55e-41!59;UBERON:0005743!1.16e-40!86;UBERON:0003080!1.71e-40!42;UBERON:0000955!6.45e-40!69;UBERON:0006238!6.45e-40!69;UBERON:0000073!8.32e-38!94;UBERON:0001016!8.32e-38!94;UBERON:0001869!4.43e-37!32;UBERON:0001893!1.37e-36!34;UBERON:0002020!2.83e-36!34;UBERON:0003528!2.83e-36!34;UBERON:0002791!3.53e-35!33;UBERON:0002619!3.80e-33!22;UBERON:0003075!1.05e-32!86;UBERON:0007284!1.05e-32!86;UBERON:0007023!1.70e-31!115;UBERON:0002346!1.81e-30!90;UBERON:0001950!2.08e-30!20;UBERON:0000956!2.67e-28!25;UBERON:0000203!2.67e-28!25;UBERON:0003056!1.53e-26!61;UBERON:0000033!3.41e-22!123;UBERON:0000153!4.34e-22!129;UBERON:0007811!4.34e-22!129;UBERON:0004121!3.14e-20!169;UBERON:0000924!2.68e-19!173;UBERON:0006601!2.68e-19!173;UBERON:0001871!1.03e-12!7;UBERON:0000064!2.41e-12!219;UBERON:0000025!4.75e-12!194;UBERON:0002420!3.22e-10!9;UBERON:0007245!3.22e-10!9;UBERON:0010009!3.22e-10!9;UBERON:0010011!3.22e-10!9;UBERON:0000454!3.22e-10!9;UBERON:0000200!7.69e-10!6;UBERON:0002308!2.30e-09!9;UBERON:0000125!2.30e-09!9;UBERON:0004111!7.42e-09!241;UBERON:0000349!9.29e-09!5;UBERON:0003076!1.35e-08!15;UBERON:0003057!1.35e-08!15;UBERON:0002021!2.38e-08!5;UBERON:0001872!2.80e-08!5;UBERON:0000483!3.00e-08!309;UBERON:0000062!4.55e-08!511;UBERON:0000119!5.50e-08!312;UBERON:0004733!1.24e-07!12;UBERON:0002028!1.24e-07!12;UBERON:0007277!1.24e-07!12;UBERON:0000475!1.32e-07!365;UBERON:0009663!2.06e-07!7;UBERON:0004732!6.83e-07!13;UBERON:0000369!9.95e-07!4;UBERON:0002435!9.95e-07!4;UBERON:0000204!9.95e-07!4;UBERON:0010082!9.95e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.87e-68;22!UBERON:0001950;2.29e-62;20!UBERON:0001869;3.32e-61;32!UBERON:0000956;1.62e-59;25!UBERON:0000203;1.62e-59;25!UBERON:0002791;3.97e-57;32!UBERON:0001893;2.67e-54;34!UBERON:0003528;3.48e-52;34!UBERON:0002020;3.48e-52;34!UBERON:0002780;4.40e-46;41!UBERON:0001890;4.40e-46;41!UBERON:0000073;4.64e-31;53!UBERON:0002616;4.64e-31;53!UBERON:0001017;4.92e-25;75!UBERON:0000955;2.53e-24;68!UBERON:0001871;2.93e-22;6!UBERON:0000200;6.66e-19;6!UBERON:0001016;1.35e-18;83!UBERON:0000349;1.56e-16;5!UBERON:0002021;8.56e-16;5!UBERON:0001872;1.13e-15;5!UBERON:0002420;3.43e-12;9!UBERON:0007245;3.43e-12;9!UBERON:0010009;3.43e-12;9!UBERON:0010011;3.43e-12;9!UBERON:0000454;3.43e-12;9!UBERON:0001870;2.64e-10;3!UBERON:0011216;1.88e-08;132!UBERON:0007023;3.42e-08;114!UBERON:0001876;8.27e-08;2!UBERON:0000369;1.07e-07;4!UBERON:0002435;1.07e-07;4!UBERON:0000204;1.07e-07;4!UBERON:0002771;1.76e-07;2!UBERON:0001954;2.57e-07;2!UBERON:0003022;2.57e-07;2!UBERON:0002421;2.57e-07;2!UBERON:0002600;2.57e-07;2!UBERON:0002702;3.41e-07;2!UBERON:0009663;3.47e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.85e-69,32;UBERON:0002619,2.74e-68,22;UBERON:0001893,1.93e-64,34;UBERON:0002780,2.65e-64,41;UBERON:0001890,2.65e-64,41;UBERON:0003080,2.65e-64,41;UBERON:0006240,2.65e-64,41;UBERON:0002791,1.23e-63,32;UBERON:0001950,1.78e-62,20;UBERON:0000956,1.20e-59,25;UBERON:0000203,1.20e-59,25;UBERON:0003528,1.46e-59,34;UBERON:0002020,1.46e-59,34;UBERON:0000073,2.66e-58,53;UBERON:0002616,2.66e-58,53;UBERON:0001049,4.36e-58,56;UBERON:0005068,4.36e-58,56;UBERON:0006241,4.36e-58,56;UBERON:0007135,4.36e-58,56;UBERON:0000955,4.06e-52,68;UBERON:0006238,4.06e-52,68;UBERON:0001017,2.90e-50,81;UBERON:0001016,2.62e-44,89;UBERON:0003056,9.08e-41,61;UBERON:0003075,6.59e-37,82;UBERON:0007284,6.59e-37,82;UBERON:0002346,8.91e-35,86;UBERON:0010371,3.40e-29,104;UBERON:0007023,1.12e-24,114;UBERON:0010314,5.46e-24,132;UBERON:0004121,1.72e-22,171;UBERON:0000924,1.72e-22,171;UBERON:0006601,1.72e-22,171;UBERON:0001871,3.09e-22,6;UBERON:0000200,5.90e-19,6;UBERON:0011216,6.31e-18,223;UBERON:0000349,1.10e-16,5;UBERON:0002021,7.95e-16,5;UBERON:0001872,1.12e-15,5;UBERON:0000025,1.28e-12,192;UBERON:0002420,3.08e-12,9;UBERON:0007245,3.08e-12,9;UBERON:0010009,3.08e-12,9;UBERON:0010011,3.08e-12,9;UBERON:0000454,3.08e-12,9;UBERON:0001870,2.23e-10,3;UBERON:0004111,7.98e-10,240;UBERON:0001876,6.92e-08,2;UBERON:0000369,9.20e-08,4;UBERON:0002435,9.20e-08,4;UBERON:0000204,9.20e-08,4;UBERON:0010082,9.20e-08,4;UBERON:0002771,2.00e-07,2;UBERON:0001954,2.34e-07,2;UBERON:0003022,2.34e-07,2;UBERON:0002421,2.34e-07,2;UBERON:0002600,2.34e-07,2;UBERON:0002702,2.74e-07,2;UBERON:0009663,3.48e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.21973706129595,0.265059536642971,0.116193942869518,1.7622379352613,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,1.27047312111232,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0,0,0.596586391912706,0.623224249527161,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,7.45547906975718,0,0,0,0,0,0.755798243562828,0.20453736500431,0,0,0,0,0,0,0,0,5.81599647657131,2.78304294485554,5.98841394003583,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,2.29133233388275,1.52581736317083,2.21158519862449,0.591095237907095,4.16832254592548,0,0,0.769502585037971,0,0,0,0.108647371922008,2.55200927785536,0.641183153813036,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.471807930864739,0,2.57690890297873,0,0.586993856796269,0,0.394584402849391,2.41981432097328,3.0607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.34823682632161,0.52418000472609,0,0,0,0,0,0,0.677942222341597,0,0,5.25479606433793,0.195551382734803,0,0.213452994739353,0.39961921916426,0,0,2.57392496792947,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,4.90332262001672,0,0,0,0,0,5.83195743917037,0,0.0788057072991982,0.367182116944987,0,0,14.201724601639,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,1.57054096250234,3.54427271986794,3.90484047686282,2.8793914062495,0.573409195690071,0.221858103073705,0.931446044120752,0,0,0,0,1.88212655758537,5.1516839638757,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34833881285112,0,0,0,0,0,0,0,0,0,2.31496845925098,0.168942440653073,0,0,0,4.00949464840019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.655257829152084,0,0,0,0,0,0,0.80057074828547,0,0,5.90908870887428,4.25089728976755,1.91560630868582,5.74325819874114,2.26864526599546,4.35690690524573,2.74508597574147,0,0,2.00548529691159,0.550285795565037,4.62102664601353,0,0,0,0.225630985047772,0.20170506870352,3.90757005616546,0,0.163771917510097,0.295712172434091,4.25486783095886,2.34323429584154,3.30698874401895,5.00984900531864,1.64092442705466,0,0,0,0,1.07140367175657,1.00885116665647,0.606965604236632,0.682986574053893,2.12885688390333,0,0,1.35939465953663,4.40677582871089,0,0,0,2.98519620840404,0.280272163313789,0.913158720509496,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,4.03268301363616,0.955538938977433,0.782988022584546,0,0,0,0,0,0,4.2109103423179,0,0.118920090777569,0.5647304101948,0.219881033490858,0,0.154348316215889,0.218559560503957,0.940634592723046,0.735444965261716,0,0.196308467114945,0,1.2679671827502,0,0,0,0,0,1.41157948686277,0,0,0,0,0,9.7227830973008,4.79985759374415,2.645134202577,0,0,0,0,0.109265571963696,0,0.305966489225945,1.3360870263278,1.28652859348783,0,0.378893491091197,0,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0.611207220914332,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.21973706129595,0.265059536642971,0.116193942869518,1.7622379352613,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,1.27047312111232,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0,0,0.596586391912706,0.623224249527161,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,7.45547906975718,0,0,0,0,0,0.755798243562828,0.20453736500431,0,0,0,0,0,0,0,0,5.81599647657131,2.78304294485554,5.98841394003583,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,2.29133233388275,1.52581736317083,2.21158519862449,0.591095237907095,4.16832254592548,0,0,0.769502585037971,0,0,0,0.108647371922008,2.55200927785536,0.641183153813036,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.471807930864739,0,2.57690890297873,0,0.586993856796269,0,0.394584402849391,2.41981432097328,3.0607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.34823682632161,0.52418000472609,0,0,0,0,0,0,0.677942222341597,0,0,5.25479606433793,0.195551382734803,0,0.213452994739353,0.39961921916426,0,0,2.57392496792947,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,4.90332262001672,0,0,0,0,0,5.83195743917037,0,0.0788057072991982,0.367182116944987,0,0,14.201724601639,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,1.57054096250234,3.54427271986794,3.90484047686282,2.8793914062495,0.573409195690071,0.221858103073705,0.931446044120752,0,0,0,0,1.88212655758537,5.1516839638757,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34833881285112,0,0,0,0,0,0,0,0,0,2.31496845925098,0.168942440653073,0,0,0,4.00949464840019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.655257829152084,0,0,0,0,0,0,0.80057074828547,0,0,5.90908870887428,4.25089728976755,1.91560630868582,5.74325819874114,2.26864526599546,4.35690690524573,2.74508597574147,0,0,2.00548529691159,0.550285795565037,4.62102664601353,0,0,0,0.225630985047772,0.20170506870352,3.90757005616546,0,0.163771917510097,0.295712172434091,4.25486783095886,2.34323429584154,3.30698874401895,5.00984900531864,1.64092442705466,0,0,0,0,1.07140367175657,1.00885116665647,0.606965604236632,0.682986574053893,2.12885688390333,0,0,1.35939465953663,4.40677582871089,0,0,0,2.98519620840404,0.280272163313789,0.913158720509496,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,4.03268301363616,0.955538938977433,0.782988022584546,0,0,0,0,0,0,4.2109103423179,0,0.118920090777569,0.5647304101948,0.219881033490858,0,0.154348316215889,0.218559560503957,0.940634592723046,0.735444965261716,0,0.196308467114945,0,1.2679671827502,0,0,0,0,0,1.41157948686277,0,0,0,0,0,9.7227830973008,4.79985759374415,2.645134202577,0,0,0,0,0.109265571963696,0,0.305966489225945,1.3360870263278,1.28652859348783,0,0.378893491091197,0,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0.611207220914332,0,0,0,0 | ||
|short_description=p10@NEURL | |short_description=p10@NEURL | ||
}} | }} |
Latest revision as of 03:42, 16 September 2015
Short description: | p10@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NEURL_5end |
Coexpression cluster: | C1559_large_amygdala_pineal_temporal_medial_olfactory_cerebellum |
Association with transcript: | -107bp_to_NM_004210, uc001kxh.2_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | B4DS86O76050 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.66e-07 | 14 |