FFCP PHASE1:Hg19::chr11:12132117..12132160,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:12132117..12132160,+
|short_description=p1@MICAL2
|description=CAGE_peak_1_at_MICAL2_5end
|association_with_transcript=0bp_to_ENST00000256194,ENST00000531...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9645 | |EntrezGene=9645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24693 | |HGNC=24693 | ||
|TSSclassifier=strong | |||
|UniProt=O94851 | |UniProt=O94851 | ||
|association_with_transcript=0bp_to_ENST00000256194,ENST00000531732,NM_014632,uc001mjy.2,uc001mjz.2,uc001mka.2_5end | |||
|cluster_id=chr11:12132117..12132160,+ | |||
|description=CAGE_peak_1_at_MICAL2_5end | |||
|id=chr11:12132117..12132160,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.92e-17!119;CL:0000055!2.88e-14!180;CL:0000359!2.99e-14!32;CL:0000183!2.50e-13!59;CL:0000187!1.23e-12!54;CL:0000192!4.20e-12!42;CL:0000514!4.20e-12!42;CL:0000680!5.09e-12!57;CL:0000056!5.09e-12!57;CL:0000355!5.09e-12!57;CL:0000057!5.55e-12!75;CL:0000220!2.17e-09!246;CL:0002321!9.51e-09!248;CL:0000393!2.23e-08!60;CL:0000211!2.23e-08!60;CL:0002494!1.77e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.73e-13;32!CL:0000192;3.64e-09;43!CL:0002494;1.74e-07;16!CL:0000187;3.43e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.93e-17,121;CL:0000359,2.98e-14,32;CL:0000187,1.22e-12,55;CL:0000057,1.72e-12,76;CL:0000192,4.42e-12,43;CL:0000514,4.42e-12,43;CL:0000680,4.92e-12,58;CL:0000056,4.92e-12,58;CL:0000355,4.92e-12,58;CL:0002321,9.27e-09,250;CL:0000393,2.37e-08,61;CL:0000211,2.37e-08,61;CL:0002494,1.77e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.64e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;7.86e-14;33!UBERON:0004571;7.86e-14;33!UBERON:0001637;1.09e-13;42!UBERON:0003509;1.09e-13;42!UBERON:0004572;1.09e-13;42!UBERON:0007500;8.35e-10;56!UBERON:0001981;8.35e-10;56!UBERON:0004537;8.35e-10;56!UBERON:0000947;3.24e-09;21!UBERON:0010191;3.24e-09;21!UBERON:0003914;2.45e-08;74!UBERON:0000055;1.34e-07;65!UBERON:0002049;1.51e-07;75!UBERON:0007798;1.51e-07;75!UBERON:0004535;1.99e-07;109!UBERON:0001009;3.10e-07;112!UBERON:0000948;3.56e-07;22!UBERON:0007100;9.30e-07;25 | |||
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| ||
|short_description=p1@MICAL2 | |||
}} | }} |
Latest revision as of 06:34, 16 September 2015
Short description: | p1@MICAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MICAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256194, ENST00000531732, NM_014632, uc001mjy.2, uc001mjz.2, uc001mka.2_5end |
EntrezGene: | MICAL2 |
HGNC: | 24693 |
UniProt: | O94851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.93e-17 | 121 |
vascular associated smooth muscle cell | 2.98e-14 | 32 |
muscle cell | 1.22e-12 | 55 |
fibroblast | 1.72e-12 | 76 |
smooth muscle cell | 4.42e-12 | 43 |
smooth muscle myoblast | 4.42e-12 | 43 |
muscle precursor cell | 4.92e-12 | 58 |
myoblast | 4.92e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.92e-12 | 58 |
embryonic cell | 9.27e-09 | 250 |
electrically responsive cell | 2.37e-08 | 61 |
electrically active cell | 2.37e-08 | 61 |
cardiocyte | 1.77e-07 | 16 |