FFCP PHASE1:Hg19::chr6:152793691..152793718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-37bp_to_ENST00000468937_5end | |association_with_transcript=-37bp_to_ENST00000468937_5end | ||
|cluster_id=chr6:152793691..152793718,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_8_at_SYNE1_5end | |description=CAGE_peak_8_at_SYNE1_5end | ||
|id=chr6:152793691..152793718,- | |id=chr6:152793691..152793718,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.34e-08;2!CL:0000242;1.34e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.36e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.24e-12;82!UBERON:0006215;3.76e-10;3!UBERON:0010122;2.21e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-57!57;UBERON:0005068!1.49e-57!57;UBERON:0006241!1.49e-57!57;UBERON:0007135!1.49e-57!57;UBERON:0002616!1.25e-52!59;UBERON:0000955!3.24e-52!69;UBERON:0006238!3.24e-52!69;UBERON:0002780!5.80e-51!41;UBERON:0001890!5.80e-51!41;UBERON:0006240!5.80e-51!41;UBERON:0001017!8.47e-50!82;UBERON:0003080!1.69e-49!42;UBERON:0005743!6.63e-49!86;UBERON:0001869!2.05e-45!32;UBERON:0001893!3.44e-45!34;UBERON:0002020!9.75e-45!34;UBERON:0003528!9.75e-45!34;UBERON:0002346!8.75e-44!90;UBERON:0002791!2.21e-43!33;UBERON:0000073!8.34e-43!94;UBERON:0001016!8.34e-43!94;UBERON:0003075!9.05e-41!86;UBERON:0007284!9.05e-41!86;UBERON:0002619!8.54e-38!22;UBERON:0007023!1.61e-35!115;UBERON:0003056!9.27e-35!61;UBERON:0001950!5.05e-34!20;UBERON:0000956!1.39e-32!25;UBERON:0000203!1.39e-32!25;UBERON:0000033!2.31e-32!123;UBERON:0000153!1.89e-31!129;UBERON:0007811!1.89e-31!129;UBERON:0000924!1.29e-26!173;UBERON:0006601!1.29e-26!173;UBERON:0004121!2.41e-24!169;UBERON:0000025!2.46e-20!194;UBERON:0000475!4.92e-15!365;UBERON:0004111!1.51e-14!241;UBERON:0002420!3.07e-14!9;UBERON:0007245!3.07e-14!9;UBERON:0010009!3.07e-14!9;UBERON:0010011!3.07e-14!9;UBERON:0000454!3.07e-14!9;UBERON:0002308!2.00e-13!9;UBERON:0000125!2.00e-13!9;UBERON:0000477!1.15e-12!286;UBERON:0000200!3.91e-12!6;UBERON:0001871!1.07e-11!7;UBERON:0000064!1.34e-11!219;UBERON:0000349!8.28e-11!5;UBERON:0009663!8.93e-11!7;UBERON:0000483!1.14e-10!309;UBERON:0000119!2.10e-10!312;UBERON:0004733!2.22e-10!12;UBERON:0002028!2.22e-10!12;UBERON:0007277!2.22e-10!12;UBERON:0001872!2.92e-10!5;UBERON:0002021!6.57e-10!5;UBERON:0003076!8.91e-10!15;UBERON:0003057!8.91e-10!15;UBERON:0004732!1.93e-09!13;UBERON:0000369!2.66e-09!4;UBERON:0002435!2.66e-09!4;UBERON:0000204!2.66e-09!4;UBERON:0010082!2.66e-09!4;UBERON:0005383!2.08e-07!3;UBERON:0005382!2.08e-07!3;UBERON:0001894!2.87e-07!7;UBERON:0006222!2.87e-07!7;UBERON:0000481!4.23e-07!347;UBERON:0002298!4.54e-07!8;UBERON:0002680!7.47e-07!9;UBERON:0001895!7.47e-07!9;UBERON:0010092!7.47e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.18e-66;32!UBERON:0002791;2.65e-62;32!UBERON:0001893;4.25e-60;34!UBERON:0002619;1.48e-59;22!UBERON:0002780;1.43e-58;41!UBERON:0001890;1.43e-58;41!UBERON:0003528;1.35e-56;34!UBERON:0002020;1.35e-56;34!UBERON:0001950;4.98e-53;20!UBERON:0000956;4.96e-52;25!UBERON:0000203;4.96e-52;25!UBERON:0000073;8.16e-44;53!UBERON:0002616;8.16e-44;53!UBERON:0000955;4.81e-35;68!UBERON:0001017;3.68e-31;75!UBERON:0001016;3.68e-25;83!UBERON:0002420;6.78e-24;9!UBERON:0007245;6.78e-24;9!UBERON:0010009;6.78e-24;9!UBERON:0010011;6.78e-24;9!UBERON:0000454;6.78e-24;9!UBERON:0000200;6.36e-20;6!UBERON:0009663;7.21e-18;7!UBERON:0000349;1.32e-17;5!UBERON:0001871;1.02e-16;6!UBERON:0001872;1.32e-16;5!UBERON:0000369;5.05e-15;4!UBERON:0002435;5.05e-15;4!UBERON:0000204;5.05e-15;4!UBERON:0000125;9.82e-14;9!UBERON:0002308;9.82e-14;9!UBERON:0001894;5.11e-12;7!UBERON:0007023;8.34e-12;114!UBERON:0005383;9.75e-12;3!UBERON:0005382;9.75e-12;3!UBERON:0001870;4.64e-11;3!UBERON:0002021;7.93e-11;5!UBERON:0011216;5.42e-10;132!UBERON:0000007;1.63e-08;2!UBERON:0001873;2.21e-08;2!UBERON:0001954;3.32e-08;2!UBERON:0003022;3.32e-08;2!UBERON:0002421;3.32e-08;2!UBERON:0002600;3.32e-08;2!UBERON:0002702;7.23e-08;2!UBERON:0001876;8.29e-08;2!UBERON:0001875;1.14e-07;2!UBERON:0006514;1.14e-07;2!UBERON:0002771;1.47e-07;2!UBERON:0001897;2.85e-07;2!UBERON:0010225;2.85e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.49e-80,41;UBERON:0001890,1.49e-80,41;UBERON:0003080,1.49e-80,41;UBERON:0006240,1.49e-80,41;UBERON:0000073,5.77e-77,53;UBERON:0002616,5.77e-77,53;UBERON:0001869,2.47e-74,32;UBERON:0001049,2.07e-72,56;UBERON:0005068,2.07e-72,56;UBERON:0006241,2.07e-72,56;UBERON:0007135,2.07e-72,56;UBERON:0000955,5.70e-72,68;UBERON:0006238,5.70e-72,68;UBERON:0001893,1.19e-69,34;UBERON:0002791,8.68e-69,32;UBERON:0003528,1.95e-64,34;UBERON:0002020,1.95e-64,34;UBERON:0001017,2.61e-62,81;UBERON:0002619,1.30e-59,22;UBERON:0001016,3.42e-55,89;UBERON:0003056,4.98e-55,61;UBERON:0001950,4.51e-53,20;UBERON:0000956,4.42e-52,25;UBERON:0000203,4.42e-52,25;UBERON:0002346,1.68e-49,86;UBERON:0003075,1.82e-49,82;UBERON:0007284,1.82e-49,82;UBERON:0010371,4.57e-42,104;UBERON:0007023,1.75e-35,114;UBERON:0004121,2.97e-32,171;UBERON:0000924,2.97e-32,171;UBERON:0006601,2.97e-32,171;UBERON:0010314,4.83e-29,132;UBERON:0002420,5.76e-24,9;UBERON:0007245,5.76e-24,9;UBERON:0010009,5.76e-24,9;UBERON:0010011,5.76e-24,9;UBERON:0000454,5.76e-24,9;UBERON:0011216,9.14e-21,223;UBERON:0000200,5.96e-20,6;UBERON:0000025,4.29e-18,192;UBERON:0009663,6.42e-18,7;UBERON:0000349,1.22e-17,5;UBERON:0001871,9.79e-17,6;UBERON:0001872,1.09e-16,5;UBERON:0000369,5.06e-15,4;UBERON:0002435,5.06e-15,4;UBERON:0000204,5.06e-15,4;UBERON:0010082,5.06e-15,4;UBERON:0000125,8.99e-14,9;UBERON:0002308,8.99e-14,9;UBERON:0004111,1.85e-13,240;UBERON:0001894,4.99e-12,7;UBERON:0006222,4.99e-12,7;UBERON:0005383,9.76e-12,3;UBERON:0005382,9.76e-12,3;UBERON:0001870,5.32e-11,3;UBERON:0002021,7.73e-11,5;UBERON:0000483,4.51e-10,306;UBERON:0000119,7.03e-10,309;UBERON:0000007,1.58e-08,2;UBERON:0001873,2.17e-08,2;UBERON:0010122,2.17e-08,2;UBERON:0001954,3.20e-08,2;UBERON:0003022,3.20e-08,2;UBERON:0002421,3.20e-08,2;UBERON:0002600,3.20e-08,2;UBERON:0001876,7.88e-08,2;UBERON:0002702,7.88e-08,2;UBERON:0001875,9.99e-08,2;UBERON:0006514,9.99e-08,2;UBERON:0002771,1.14e-07,2;UBERON:0001897,2.38e-07,2;UBERON:0010225,2.38e-07,2 | |||
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|short_description=p8@SYNE1 | |short_description=p8@SYNE1 | ||
}} | }} |
Latest revision as of 06:51, 16 September 2015
Short description: | p8@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SYNE1_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -37bp_to_ENST00000468937_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.36e-08 | 2 |