FFCP PHASE1:Hg19::chr6:152793728..152793766,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:152793728..152793766,-
|short_description=p14@SYNE1
|description=CAGE_peak_14_at_SYNE1_5end
|association_with_transcript=0bp_to_ENST00000474655,ENST0000049...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt=F5H422,Q5H9Q3 | |UniProt=F5H422,Q5H9Q3 | ||
|association_with_transcript=0bp_to_ENST00000474655,ENST00000495090,uc003qoy.2,uc003qoz.2_5end | |||
|cluster_id=chr6:152793728..152793766,- | |||
|coexpression_cluster_id=C1303 | |||
|description=CAGE_peak_14_at_SYNE1_5end | |||
|id=chr6:152793728..152793766,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.07e-08;2!CL:0000242;1.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-14;82!UBERON:0010122;3.65e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.17e-57!41;UBERON:0001890!4.17e-57!41;UBERON:0006240!4.17e-57!41;UBERON:0003080!1.76e-55!42;UBERON:0001049!7.06e-55!57;UBERON:0005068!7.06e-55!57;UBERON:0006241!7.06e-55!57;UBERON:0007135!7.06e-55!57;UBERON:0001017!4.76e-54!82;UBERON:0005743!5.43e-53!86;UBERON:0000073!3.99e-52!94;UBERON:0001016!3.99e-52!94;UBERON:0001893!9.68e-52!34;UBERON:0002616!4.15e-50!59;UBERON:0002791!7.36e-50!33;UBERON:0000955!1.13e-49!69;UBERON:0006238!1.13e-49!69;UBERON:0001869!3.48e-49!32;UBERON:0002020!5.55e-48!34;UBERON:0003528!5.55e-48!34;UBERON:0002346!7.55e-40!90;UBERON:0002619!3.77e-39!22;UBERON:0003075!5.18e-37!86;UBERON:0007284!5.18e-37!86;UBERON:0003056!9.61e-37!61;UBERON:0000956!1.37e-36!25;UBERON:0000203!1.37e-36!25;UBERON:0001950!2.46e-35!20;UBERON:0000924!6.87e-31!173;UBERON:0006601!6.87e-31!173;UBERON:0000033!7.44e-31!123;UBERON:0000153!1.10e-28!129;UBERON:0007811!1.10e-28!129;UBERON:0004121!1.55e-28!169;UBERON:0007023!4.60e-27!115;UBERON:0002420!5.10e-17!9;UBERON:0007245!5.10e-17!9;UBERON:0010009!5.10e-17!9;UBERON:0010011!5.10e-17!9;UBERON:0000454!5.10e-17!9;UBERON:0009663!2.48e-13!7;UBERON:0002308!1.23e-12!9;UBERON:0000125!1.23e-12!9;UBERON:0000200!2.01e-12!6;UBERON:0001871!6.05e-12!7;UBERON:0000349!5.27e-11!5;UBERON:0000475!6.78e-11!365;UBERON:0000025!9.16e-11!194;UBERON:0001872!1.18e-10!5;UBERON:0002021!1.49e-10!5;UBERON:0000369!2.97e-09!4;UBERON:0002435!2.97e-09!4;UBERON:0000204!2.97e-09!4;UBERON:0010082!2.97e-09!4;UBERON:0000064!1.68e-07!219;UBERON:0005383!2.21e-07!3;UBERON:0005382!2.21e-07!3;UBERON:0001894!4.21e-07!7;UBERON:0006222!4.21e-07!7;UBERON:0002771!6.70e-07!3;UBERON:0004111!8.12e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.93e-76;32!UBERON:0002619;9.81e-76;22!UBERON:0002791;5.61e-71;32!UBERON:0001893;1.59e-68;34!UBERON:0001950;3.65e-68;20!UBERON:0000956;2.48e-66;25!UBERON:0000203;2.48e-66;25!UBERON:0003528;1.34e-65;34!UBERON:0002020;1.34e-65;34!UBERON:0002780;1.62e-58;41!UBERON:0001890;1.62e-58;41!UBERON:0000073;5.90e-39;53!UBERON:0002616;5.90e-39;53!UBERON:0000955;6.25e-32;68!UBERON:0001017;3.41e-31;75!UBERON:0000200;9.25e-23;6!UBERON:0001016;3.79e-22;83!UBERON:0002420;9.77e-21;9!UBERON:0007245;9.77e-21;9!UBERON:0010009;9.77e-21;9!UBERON:0010011;9.77e-21;9!UBERON:0000454;9.77e-21;9!UBERON:0000349;4.95e-20;5!UBERON:0001872;2.84e-19;5!UBERON:0002021;4.00e-19;5!UBERON:0001871;7.44e-19;6!UBERON:0000369;1.20e-16;4!UBERON:0002435;1.20e-16;4!UBERON:0000204;1.20e-16;4!UBERON:0009663;5.06e-14;7!UBERON:0005383;5.43e-13;3!UBERON:0005382;5.43e-13;3!UBERON:0001870;1.59e-12;3!UBERON:0000125;7.86e-11;9!UBERON:0002308;7.86e-11;9!UBERON:0007023;2.84e-10;114!UBERON:0011216;5.83e-10;132!UBERON:0000007;2.60e-09;2!UBERON:0001873;3.65e-09;2!UBERON:0001954;3.72e-09;2!UBERON:0003022;3.72e-09;2!UBERON:0002421;3.72e-09;2!UBERON:0002600;3.72e-09;2!UBERON:0001876;6.21e-09;2!UBERON:0002702;9.69e-09;2!UBERON:0002771;1.24e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.08e-85,32;UBERON:0002780,8.26e-82,41;UBERON:0001890,8.26e-82,41;UBERON:0003080,8.26e-82,41;UBERON:0006240,8.26e-82,41;UBERON:0001893,2.21e-80,34;UBERON:0002791,2.41e-79,32;UBERON:0002619,4.19e-76,22;UBERON:0003528,2.08e-74,34;UBERON:0002020,2.08e-74,34;UBERON:0000073,2.94e-70,53;UBERON:0002616,2.94e-70,53;UBERON:0001950,1.49e-68,20;UBERON:0000955,6.06e-67,68;UBERON:0006238,6.06e-67,68;UBERON:0000956,1.17e-66,25;UBERON:0000203,1.17e-66,25;UBERON:0001049,3.99e-66,56;UBERON:0005068,3.99e-66,56;UBERON:0006241,3.99e-66,56;UBERON:0007135,3.99e-66,56;UBERON:0001017,9.90e-62,81;UBERON:0001016,8.71e-55,89;UBERON:0003056,7.19e-53,61;UBERON:0002346,3.87e-43,86;UBERON:0003075,8.03e-43,82;UBERON:0007284,8.03e-43,82;UBERON:0010371,9.47e-37,104;UBERON:0004121,3.46e-31,171;UBERON:0000924,3.46e-31,171;UBERON:0006601,3.46e-31,171;UBERON:0007023,7.78e-29,114;UBERON:0010314,2.39e-25,132;UBERON:0000200,7.53e-23,6;UBERON:0002420,7.51e-21,9;UBERON:0007245,7.51e-21,9;UBERON:0010009,7.51e-21,9;UBERON:0010011,7.51e-21,9;UBERON:0000454,7.51e-21,9;UBERON:0011216,2.62e-20,223;UBERON:0000349,4.60e-20,5;UBERON:0001872,2.23e-19,5;UBERON:0002021,3.51e-19,5;UBERON:0001871,5.60e-19,6;UBERON:0000369,1.25e-16,4;UBERON:0002435,1.25e-16,4;UBERON:0000204,1.25e-16,4;UBERON:0010082,1.25e-16,4;UBERON:0009663,4.36e-14,7;UBERON:0000025,8.42e-14,192;UBERON:0005383,5.66e-13,3;UBERON:0005382,5.66e-13,3;UBERON:0001870,1.29e-12,3;UBERON:0000125,7.02e-11,9;UBERON:0002308,7.02e-11,9;UBERON:0004111,2.52e-10,240;UBERON:0000007,2.55e-09,2;UBERON:0001873,3.80e-09,2;UBERON:0010122,3.80e-09,2;UBERON:0001954,3.95e-09,2;UBERON:0003022,3.95e-09,2;UBERON:0002421,3.95e-09,2;UBERON:0002600,3.95e-09,2;UBERON:0001876,5.42e-09,2;UBERON:0002702,8.00e-09,2;UBERON:0002771,1.37e-08,2;UBERON:0000483,3.92e-07,306;UBERON:0000119,5.46e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0,0.900273288253207,0,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.473107245101804,0.702848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693138033939733,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,4.22008249231538,0,0,0,0,0,0,1.22722419002586,0,2.48831670129446,0,0,0,0,0,0,1.93866549219044,3.06134723934109,5.98841394003583,0,0,0,0,0,0,1.03423011972439,0,0,5.31444831488303,5.90922549264499,1.52581736317083,0.663475559587348,0.591095237907095,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0,0,0,0.269604531922708,0,2.10838001152805,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1494545695225,2.71176888936639,0.137041924646751,0,6.71094437132314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0139579025628,3.54128855890097,0,0,0,0,0,3.64497339948148,0,0.394028536495991,0.681909645754975,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.66078794705889,2.754200475543,1.14681839138014,0,0,0,0,0,0,0,17.3283915148546,1.01444720027578,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,1.2754495206101,0.123935764259002,0.558644917973244,0,0,0,0.705351887381368,0,4.36758730655925,7.08482881627925,2.87340946302872,3.48697819209284,3.27693205088234,1.72893131160545,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8496423232485,5.46754669029693,2.89361515101658,2.47321659756237,3.82882366312754,0,0,0.175871244359621,0,0,0,6.06965604236632,7.74051450594412,0,0,0,0.679697329768317,3.55172977239385,0,0,0,7.22731713613609,0,0,0.215927591218621,2.38875843943525,0.78624198594322,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.63179576458195,2.61810414204226,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0,0.900273288253207,0,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.473107245101804,0.702848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693138033939733,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,4.22008249231538,0,0,0,0,0,0,1.22722419002586,0,2.48831670129446,0,0,0,0,0,0,1.93866549219044,3.06134723934109,5.98841394003583,0,0,0,0,0,0,1.03423011972439,0,0,5.31444831488303,5.90922549264499,1.52581736317083,0.663475559587348,0.591095237907095,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0,0,0,0.269604531922708,0,2.10838001152805,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1494545695225,2.71176888936639,0.137041924646751,0,6.71094437132314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0139579025628,3.54128855890097,0,0,0,0,0,3.64497339948148,0,0.394028536495991,0.681909645754975,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.66078794705889,2.754200475543,1.14681839138014,0,0,0,0,0,0,0,17.3283915148546,1.01444720027578,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,1.2754495206101,0.123935764259002,0.558644917973244,0,0,0,0.705351887381368,0,4.36758730655925,7.08482881627925,2.87340946302872,3.48697819209284,3.27693205088234,1.72893131160545,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8496423232485,5.46754669029693,2.89361515101658,2.47321659756237,3.82882366312754,0,0,0.175871244359621,0,0,0,6.06965604236632,7.74051450594412,0,0,0,0.679697329768317,3.55172977239385,0,0,0,7.22731713613609,0,0,0.215927591218621,2.38875843943525,0.78624198594322,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.63179576458195,2.61810414204226,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@SYNE1 | |||
}} | }} |
Latest revision as of 06:53, 16 September 2015
Short description: | p14@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SYNE1_5end |
Coexpression cluster: | C1303_hippocampus_pituitary_insula_medulla_medial_occipital_paracentral |
Association with transcript: | 0bp_to_ENST00000474655, ENST00000495090, uc003qoy.2, uc003qoz.2_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | F5H422Q5H9Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.37e-08 | 2 |