FFCP PHASE1:Hg19::chrX:78003204..78003248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2846 | |EntrezGene=2846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4478 | |HGNC=4478 | ||
|TSSclassifier=strong | |||
|UniProt=Q99677 | |UniProt=Q99677 | ||
|association_with_transcript=0bp_to_ENST00000435339,ENST00000514744,NM_005296,uc010nme.2_5end | |association_with_transcript=0bp_to_ENST00000435339,ENST00000514744,NM_005296,uc010nme.2_5end | ||
|cluster_id=chrX:78003204..78003248,+ | |||
|description=CAGE_peak_1_at_LPAR4_5end | |description=CAGE_peak_1_at_LPAR4_5end | ||
|id=chrX:78003204..78003248,+ | |id=chrX:78003204..78003248,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.36e-07!6;CL:0000031!3.36e-07!6;CL:0000404!3.36e-07!6;CL:0000047!4.89e-07!8 | |ontology_enrichment_celltype=CL:0000540!3.36e-07!6;CL:0000031!3.36e-07!6;CL:0000404!3.36e-07!6;CL:0000047!4.89e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.15e-08;3!CL:0000067;2.15e-08;3!CL:0005012;2.15e-08;3!CL:0002304;2.15e-08;3!CL:0000540;8.16e-08;6!CL:0000404;8.16e-08;6!CL:0000594;1.26e-07;3 | |ontology_enrichment_celltype_v019=CL:0000064;2.15e-08;3!CL:0000067;2.15e-08;3!CL:0005012;2.15e-08;3!CL:0002304;2.15e-08;3!CL:0000540;8.16e-08;6!CL:0000404;8.16e-08;6!CL:0000594;1.26e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.79e-09,8;CL:0000064,1.97e-08,3;CL:0000067,1.97e-08,3;CL:0005012,1.97e-08,3;CL:0002304,1.97e-08,3;CL:0000540,8.34e-08,6;CL:0000031,8.34e-08,6;CL:0000404,8.34e-08,6;CL:0000594,1.21e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.69e-08;3!UBERON:0003057;1.69e-08;3!CL:0000031;8.16e-08;6 | |ontology_enrichment_development_v019=UBERON:0006241;1.69e-08;3!UBERON:0003057;1.69e-08;3!CL:0000031;8.16e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.06e-38!82;UBERON:0005743!1.70e-37!86;UBERON:0002346!1.03e-35!90;UBERON:0001049!1.29e-35!57;UBERON:0005068!1.29e-35!57;UBERON:0006241!1.29e-35!57;UBERON:0007135!1.29e-35!57;UBERON:0000073!1.50e-34!94;UBERON:0001016!1.50e-34!94;UBERON:0003075!6.92e-34!86;UBERON:0007284!6.92e-34!86;UBERON:0002616!9.77e-33!59;UBERON:0000924!1.18e-29!173;UBERON:0006601!1.18e-29!173;UBERON:0000955!2.15e-28!69;UBERON:0006238!2.15e-28!69;UBERON:0004121!5.70e-28!169;UBERON:0000153!5.73e-25!129;UBERON:0007811!5.73e-25!129;UBERON:0007023!1.43e-24!115;UBERON:0000033!2.19e-24!123;UBERON:0002780!2.64e-24!41;UBERON:0001890!2.64e-24!41;UBERON:0006240!2.64e-24!41;UBERON:0003080!2.07e-23!42;UBERON:0003056!2.69e-22!61;UBERON:0001893!5.21e-21!34;UBERON:0002020!6.35e-21!34;UBERON:0003528!6.35e-21!34;UBERON:0002791!2.30e-20!33;UBERON:0001869!3.22e-19!32;UBERON:0000956!7.44e-15!25;UBERON:0000203!7.44e-15!25;UBERON:0003076!1.61e-13!15;UBERON:0003057!1.61e-13!15;UBERON:0002619!2.97e-12!22;UBERON:0004732!1.68e-11!13;UBERON:0004733!1.18e-10!12;UBERON:0002028!1.18e-10!12;UBERON:0007277!1.18e-10!12;UBERON:0001950!2.19e-10!20;UBERON:0000475!4.79e-10!365;UBERON:0000481!6.61e-10!347;UBERON:0000922!8.64e-10!612;UBERON:0000119!1.21e-09!312;UBERON:0000468!5.10e-09!659;UBERON:0000483!1.08e-08!309;UBERON:0002050!1.20e-08!605;UBERON:0005423!1.20e-08!605;UBERON:0000923!3.08e-08!604;UBERON:0005291!3.08e-08!604;UBERON:0006598!3.08e-08!604;UBERON:0002532!3.08e-08!604;UBERON:0002680!4.92e-08!9;UBERON:0001895!4.92e-08!9;UBERON:0010092!4.92e-08!9;UBERON:0002420!5.76e-08!9;UBERON:0007245!5.76e-08!9;UBERON:0010009!5.76e-08!9;UBERON:0010011!5.76e-08!9;UBERON:0000454!5.76e-08!9;UBERON:0000064!6.19e-08!219;UBERON:0002308!1.33e-07!9;UBERON:0000125!1.33e-07!9;UBERON:0000025!2.18e-07!194;UBERON:0000467!2.65e-07!625;UBERON:0000480!3.22e-07!626;UBERON:0000477!5.70e-07!286;UBERON:0000062!6.88e-07!511 | |ontology_enrichment_uberon=UBERON:0001017!7.06e-38!82;UBERON:0005743!1.70e-37!86;UBERON:0002346!1.03e-35!90;UBERON:0001049!1.29e-35!57;UBERON:0005068!1.29e-35!57;UBERON:0006241!1.29e-35!57;UBERON:0007135!1.29e-35!57;UBERON:0000073!1.50e-34!94;UBERON:0001016!1.50e-34!94;UBERON:0003075!6.92e-34!86;UBERON:0007284!6.92e-34!86;UBERON:0002616!9.77e-33!59;UBERON:0000924!1.18e-29!173;UBERON:0006601!1.18e-29!173;UBERON:0000955!2.15e-28!69;UBERON:0006238!2.15e-28!69;UBERON:0004121!5.70e-28!169;UBERON:0000153!5.73e-25!129;UBERON:0007811!5.73e-25!129;UBERON:0007023!1.43e-24!115;UBERON:0000033!2.19e-24!123;UBERON:0002780!2.64e-24!41;UBERON:0001890!2.64e-24!41;UBERON:0006240!2.64e-24!41;UBERON:0003080!2.07e-23!42;UBERON:0003056!2.69e-22!61;UBERON:0001893!5.21e-21!34;UBERON:0002020!6.35e-21!34;UBERON:0003528!6.35e-21!34;UBERON:0002791!2.30e-20!33;UBERON:0001869!3.22e-19!32;UBERON:0000956!7.44e-15!25;UBERON:0000203!7.44e-15!25;UBERON:0003076!1.61e-13!15;UBERON:0003057!1.61e-13!15;UBERON:0002619!2.97e-12!22;UBERON:0004732!1.68e-11!13;UBERON:0004733!1.18e-10!12;UBERON:0002028!1.18e-10!12;UBERON:0007277!1.18e-10!12;UBERON:0001950!2.19e-10!20;UBERON:0000475!4.79e-10!365;UBERON:0000481!6.61e-10!347;UBERON:0000922!8.64e-10!612;UBERON:0000119!1.21e-09!312;UBERON:0000468!5.10e-09!659;UBERON:0000483!1.08e-08!309;UBERON:0002050!1.20e-08!605;UBERON:0005423!1.20e-08!605;UBERON:0000923!3.08e-08!604;UBERON:0005291!3.08e-08!604;UBERON:0006598!3.08e-08!604;UBERON:0002532!3.08e-08!604;UBERON:0002680!4.92e-08!9;UBERON:0001895!4.92e-08!9;UBERON:0010092!4.92e-08!9;UBERON:0002420!5.76e-08!9;UBERON:0007245!5.76e-08!9;UBERON:0010009!5.76e-08!9;UBERON:0010011!5.76e-08!9;UBERON:0000454!5.76e-08!9;UBERON:0000064!6.19e-08!219;UBERON:0002308!1.33e-07!9;UBERON:0000125!1.33e-07!9;UBERON:0000025!2.18e-07!194;UBERON:0000467!2.65e-07!625;UBERON:0000480!3.22e-07!626;UBERON:0000477!5.70e-07!286;UBERON:0000062!6.88e-07!511 | ||
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| ||
|short_description=p1@LPAR4 | |short_description=p1@LPAR4 | ||
}} | }} |
Latest revision as of 11:54, 16 September 2015
Short description: | p1@LPAR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPAR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435339, ENST00000514744, NM_005296, uc010nme.2_5end |
EntrezGene: | LPAR4 |
HGNC: | 4478 |
UniProt: | Q99677 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.79e-09 | 8 |
ciliated cell | 1.97e-08 | 3 |
ciliated epithelial cell | 1.97e-08 | 3 |
multi-ciliated epithelial cell | 1.97e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.97e-08 | 3 |
neuron | 8.34e-08 | 6 |
neuroblast | 8.34e-08 | 6 |
electrically signaling cell | 8.34e-08 | 6 |
skeletal muscle satellite cell | 1.21e-07 | 3 |