FFCP PHASE1:Hg19::chr10:116852602..116852626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26033 | |EntrezGene=26033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29063 | |HGNC=29063 | ||
|TSSclassifier=strong | |||
|UniProt=F5H129,Q5VV63 | |UniProt=F5H129,Q5VV63 | ||
|association_with_transcript=-497bp_to_ENST00000485327,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | |association_with_transcript=-497bp_to_ENST00000485327,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | ||
|cluster_id=chr10:116852602..116852626,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_ATRNL1_5end | |description=CAGE_peak_5_at_ATRNL1_5end | ||
|id=chr10:116852602..116852626,+ | |id=chr10:116852602..116852626,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.60e-07!5;CL:0000047!9.81e-07!8 | |ontology_enrichment_celltype=CL:0002322!6.60e-07!5;CL:0000047!9.81e-07!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.80e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@ATRNL1 | |short_description=p5@ATRNL1 | ||
}} | }} |
Latest revision as of 13:25, 16 September 2015
Short description: | p5@ATRNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATRNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -497bp_to_ENST00000485327, ENST00000529665, NM_207303, uc001lce.2, uc001lcf.2, uc001lcg.2, uc009xyq.2_5end |
EntrezGene: | ATRNL1 |
HGNC: | 29063 |
UniProt: | F5H129Q5VV63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data